mRNA_M-pyrifera_M_contig112049.2522.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig112049.2522.1 vs. uniprot
Match: A0A2V3J522_9FLOR (Decapping nuclease n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J522_9FLOR) HSP 1 Score: 110 bits (276), Expect = 9.300e-26 Identity = 60/179 (33.52%), Postives = 98/179 (54.75%), Query Frame = 1
Query: 22 VRKPEEVGCFHLDGQGKELYGAEAKEHIRSYQTPSLPVDLNERMETFKPRATSVYPLLPILRGIKHEQVPL--HADFLSFRNNFNKIMGTPYNRSEPWQIGVQLTTTGDNVALILFHILPPTPGGPHIRVDTDDFAQRASYWGYRFEAVCTDSTDEDVDANVEFCTIVRTAIGRHRILL 552
+ +P EV CF K YG + ++ Y+ P+L +L ++++ F P+A + + I+ ++H+ D ++FRNN NKI GTPYN+ W+I + G+ V L + I P + +A R Y+GYRFEA+CT + +E V+AN EFC++ R +G HRI++
Sbjct: 40 ISEPREVACFSRGADRKVQYGD--RRELKRYREPALNSNLGDKLDCFVPKADEMANVDTIVEALEHDGYNRMEEIDVVTFRNNLNKIGGTPYNKRNDWEIDCAMV--GNTVFLDIRKIDEDKP---------NPYAFRFMYYGYRFEAICTGAEEELVNANSEFCSVARLRLGNHRIIM 205
BLAST of mRNA_M-pyrifera_M_contig112049.2522.1 vs. uniprot
Match: A0A2P6NUM9_9EUKA (Decapping nuclease n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NUM9_9EUKA) HSP 1 Score: 109 bits (273), Expect = 8.560e-25 Identity = 66/181 (36.46%), Postives = 101/181 (55.80%), Query Frame = 1
Query: 19 SVRKPEEVGCFHLDGQGKELYGAEAKEHIRSYQTPSLPVDLNERMETFKPRA--TSVYPLLPILRGIKHEQVPLHADFLSFRNNFNKIMGTPYNRSEPWQIGVQLTTTGDNVALILFHILPPTPGGPHIRVDTDDFAQRASYWGYRFEAVCTDSTD-EDVDANVEFCTIVRTAIGRHRILL 552
+ ++ +E+ CF +D GK GA K+ R + +P LP+DLN + F P+ T++ P+L + + P+H F+SFRNNFNKIM TPY+R+E W I ++ I FHI+ T+ Q+ SY+GY VCTD+ + + VD NV+FC++V + H+ILL
Sbjct: 23 AAKRGKEISCFQIDADGKISVGA--KDQFRVFSSPQLPIDLNVGFDQFVPKKDQTAIDPILETIEKSNIDLKPVH--FVSFRNNFNKIMETPYSRNE-WSIDIEKKEN-----TIFFHIVQKPDS-------TEPQQQKFSYYGYPLY-VCTDTNNSKSVDPNVQFCSLVSLNMSEHKILL 185
BLAST of mRNA_M-pyrifera_M_contig112049.2522.1 vs. uniprot
Match: R7Q5V2_CHOCR (Decapping nuclease n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5V2_CHOCR) HSP 1 Score: 106 bits (265), Expect = 3.380e-24 Identity = 61/179 (34.08%), Postives = 96/179 (53.63%), Query Frame = 1
Query: 22 VRKPEEVGCFHLDGQGKELYGAEAKEHIRSYQTPSLPVDLNERMETFKPRATSVYPLLPILRGIKHEQ--VPLHADFLSFRNNFNKIMGTPYNRSEPWQIGVQLTTTGDNVALILFHILPPTPGGPHIRVDTDDFAQRASYWGYRFEAVCTDSTDEDVDANVEFCTIVRTAIGRHRILL 552
V P EV + DG +G+ KE + +Y P L V+L E+ E++ P+ + +++ ++ +Q + AD +++RNN NKI GTPY + W++ L VA ++ + T + TD QR Y+GYRFE++CT DE V+AN E+C+I R I HRIL+
Sbjct: 32 VSAPFEVSSYSRDGNRNVTFGS--KEQLATYTEPKLNVNLGEKFESYIPKRDEDVGVETVVKALQSKQFDIDTQADIVTYRNNMNKIGGTPYENRDGWELDCAL------VAKTVYLDIRKTN-----KESTDPQQQRFMYYGYRFESLCTGLEDEPVNANSEYCSISRLRIANHRILM 197
BLAST of mRNA_M-pyrifera_M_contig112049.2522.1 vs. uniprot
Match: L1IT82_GUITC (Decapping nuclease n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IT82_GUITC) HSP 1 Score: 103 bits (257), Expect = 2.670e-23 Identity = 61/188 (32.45%), Postives = 93/188 (49.47%), Query Frame = 1
Query: 1 LRGNPPSVRKPEEVGCFHLDGQGKELYGAEAKEHIRSYQTPSLPVDLNERMETFKPRATSVYPLLPILRGIKHEQVPL--HADFLSFRNNFNKIMGTPYNRSEPWQIGVQLTTTGDNVALILFHILPPTPGGPHIRVDTDDFAQRASYWGYRFEAVCT--DSTDEDVDANVEFCTIVRTAIGRHRILL 552
LR + V P E+ + D G+ A IR Y+ P LP DLN M + + L P+L+ + H Q DF+S+RNN NKIM TPYN+ +PW+I +L + + + + + P ++ YWGY+FE CT D VDAN E+C++ + +IG +R++L
Sbjct: 14 LRASSVRVTAPAEITSYSKDASGRITIPAC---RIRLYKKPHLPYDLNIGMSEYIAKKEGDVTLEPVLQALSHAQFSTTRSCDFVSYRNNLNKIMETPYNKKDPWKI--KLRKDSSVIYMDVVKLEEQSTQSPRSM-------RKFQYWGYKFEGACTSDDGDQSHVDANEEYCSVFQISIGENRLVL 189
BLAST of mRNA_M-pyrifera_M_contig112049.2522.1 vs. uniprot
Match: W1NTX6_AMBTC (Decapping nuclease n=1 Tax=Amborella trichopoda TaxID=13333 RepID=W1NTX6_AMBTC) HSP 1 Score: 103 bits (257), Expect = 1.690e-22 Identity = 60/186 (32.26%), Postives = 97/186 (52.15%), Query Frame = 1
Query: 22 VRKPEEVGCFHLDGQGKELYGAEAKEHIRSYQTPSLPVDLNERMETF-KPRATSVYPLLPILRGIKHEQVPL-HADFLSFRNNFNKIMGTPYNRSEPWQIGVQLTTTGDNVALILFHILPPTPGGPHIRVDTDDFAQRASYWGYRFEAVCTDSTDED-------VDANVEFCTIVRTAIGRHRILL 552
+++P E+ C+ G+ + R + + DLN ETF + R T +L I+++++PL + F++FRNN NKIM T YNR +PW++GV + V + H LP P ++ +R YWGY FE + T+ + + VDANVEFC +++T +G HRI++
Sbjct: 195 IQEPCELACYSRVEGGEVHFDDRCLRQFRRLVSEEVGADLNAGFETFIEKRDTDNEGFGDLLASIRNKKIPLQNIHFVTFRNNLNKIMATAYNRLDPWEMGVHKR---NGVVYLDVHKLPERP--------QNELDRRRCYWGYSFENLATEESRRNDIDNLHPVDANVEFCAVIKTKLGAHRIIM 369
BLAST of mRNA_M-pyrifera_M_contig112049.2522.1 vs. uniprot
Match: A0A443PDJ1_9MAGN (Decapping nuclease n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A443PDJ1_9MAGN) HSP 1 Score: 103 bits (256), Expect = 2.080e-22 Identity = 58/179 (32.40%), Postives = 96/179 (53.63%), Query Frame = 1
Query: 25 RKPEEVGCFHLDGQGKELYGAEAKEHIRSYQTPSLPVDLNERMETF-KPRATSVYPLLPILRGIKHEQVPLHAD--FLSFRNNFNKIMGTPYNRSEPWQIGVQLTTTGDNVALILFHILPPTPGGPHIRVDTDDFAQRASYWGYRFEAVCTDSTDEDVDANVEFCTIVRTAIGRHRILL 552
++P E+ C+ G + + + + + DLNE E+F + R +L I+++ +PL + F++FRNN NKIM T Y R EPW++GV + V + H LP R TD +R YWGY FE++ T++ ++DANVE+C++++T +G HRI++
Sbjct: 179 QEPSEIACYSRVDGGDVSFDDRSLRLFKRHVCDDVGADLNEGFESFVEKRDLGCEGFGDLLACIRNKNIPLRNNIHFVTFRNNLNKIMATAYIRHEPWEMGVHKR---NGVVYLDVHKLPE-------RRQTD-LDRRRCYWGYAFESLATENAPSNIDANVEYCSVIKTKLGAHRIIM 346
BLAST of mRNA_M-pyrifera_M_contig112049.2522.1 vs. uniprot
Match: S8DJ57_9LAMI (Decapping nuclease (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8DJ57_9LAMI) HSP 1 Score: 101 bits (252), Expect = 6.730e-22 Identity = 62/187 (33.16%), Postives = 97/187 (51.87%), Query Frame = 1
Query: 19 SVRKPEEVGCFHLDGQGKELYGAEAKEHIRSYQTPSLPVDLNERMETF-KPRATSVYPLLPILRGIKHEQVPL-HADFLSFRNNFNKIMGTPYNRSEPWQIGVQLTTTGDNVALILFHILPPTPGGPHIRVDTDDFAQRASYWGYRFEAVCTDS---TDED----VDANVEFCTIVRTAIGRHRILL 552
+ ++P E+ C+ G + + + T + DLNE +TF + + +L I+ + +PL + F++FRNN NKI+ T YNR EPW++GV + V + H LP P D +R SYWGY FE + T+ TD + VDANVE+C++++T +G HRIL+
Sbjct: 201 AFQEPCELACYSRVEGGDVYFDDRSLRLFKRLITEDIGADLNEGFDTFVEKKDLGSQGFGDLLAAIRDKNIPLENMHFVTFRNNLNKILATAYNRHEPWEMGVHKR---NGVVYLDVHKLPERP--------ETDLDRRRSYWGYCFETLATEDPRRTDGEGIHHVDANVEYCSVLKTKLGAHRILM 376
BLAST of mRNA_M-pyrifera_M_contig112049.2522.1 vs. uniprot
Match: A0A7S1XF81_9RHOD (Decapping nuclease n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XF81_9RHOD) HSP 1 Score: 100 bits (248), Expect = 1.170e-21 Identity = 68/181 (37.57%), Postives = 92/181 (50.83%), Query Frame = 1
Query: 22 VRKPEEVGCFHLDGQGKELYGAEAKEHIRSYQTPSLPVDLNERMETFKPRATSVYPLLPILRGIKHEQVPL--HADFLSFRNNFNKIMGTPYNRSEPWQIGVQLTTTGDNVALILFHILPPTPGGPHIRVDTDDFAQRASYWGYRFEAVCT-DSTDED-VDANVEFCTIVRTAIGRHRILL 552
V +P EV F D + YG+ A +RS+ PS VDLN + + + S L P+L + Q AD +++RNN KI TPY++ +PW+I + V L + + P P ++ QR Y+GYRFE CT D ED V+AN EFCTIVR IG RILL
Sbjct: 34 VSEPREVAWFSRDAKRNLQYGSRAM--LRSFYLPSSEVDLNIGFDKYVAKLESDVGLEPVLHALAQSQYDTKKEADVITYRNNLLKIGLTPYSKKDPWEI--RACNVDGTVFLDIVKLEEPPP---------NEQTQRFLYYGYRFEQACTGDVAGEDPVNANEEFCTIVRLRIGTTRILL 201
BLAST of mRNA_M-pyrifera_M_contig112049.2522.1 vs. uniprot
Match: A0A251VAT4_HELAN (Decapping nuclease n=2 Tax=Heliantheae alliance TaxID=911341 RepID=A0A251VAT4_HELAN) HSP 1 Score: 100 bits (250), Expect = 1.710e-21 Identity = 61/187 (32.62%), Postives = 97/187 (51.87%), Query Frame = 1
Query: 19 SVRKPEEVGCFHLDGQGKELYGAEAKEHIRSYQTPSLPVDLNERMETF-KPRATSVYPLLPILRGIKHEQVPL-HADFLSFRNNFNKIMGTPYNRSEPWQIGVQLTTTGDNVALILFHILPPTPGGPHIRVDTDDFAQRASYWGYRFEAVCTDSTDED-------VDANVEFCTIVRTAIGRHRILL 552
+ ++P E+GC+ G+ + + + T + DLN+ +TF + + +L I+++ +PL + F+++RNN NKIM T Y R EPW++GV V + H LP P R + D +R SYWGY FE + T+ D VDANVE+C +++T +G HRIL+
Sbjct: 233 AFQEPSELGCYSRVEGGEVYFDDSSLRLFKRLITEDIGADLNQGFDTFIEKKDLGSQGFGDLLACIRNKNIPLQNMHFVTYRNNLNKIMATAYLRHEPWEMGVHKRK---GVVYLDVHKLPERP-----RSERD---RRMSYWGYCFETLATEDPRRDDGEGIHHVDANVEYCAVIKTKLGAHRILM 408
BLAST of mRNA_M-pyrifera_M_contig112049.2522.1 vs. uniprot
Match: A0A5J4ZW95_9ASTE (Decapping nuclease n=4 Tax=Nyssaceae TaxID=4289 RepID=A0A5J4ZW95_9ASTE) HSP 1 Score: 100 bits (249), Expect = 2.080e-21 Identity = 58/184 (31.52%), Postives = 96/184 (52.17%), Query Frame = 1
Query: 19 SVRKPEEVGCFHLDGQGKELYGAEAKEHIRSYQTPSLPVDLNERMETF-KPRATSVYPLLPILRGIKHEQVPL-HADFLSFRNNFNKIMGTPYNRSEPWQIGVQLTTTGDNVALILFHILPPTPGGPHIRVDTDDFAQRASYWGYRFEAVCTDSTDED----VDANVEFCTIVRTAIGRHRILL 552
++++P E+ C+ G + + T + DLN+ +TF + + +L I+++ +PL + F++FRNN NKIM T Y R EPW++GV + V + H LP P + +R YWGY FE++ T+ D D +DANVE+C++++T +G HRIL+
Sbjct: 196 TIQEPCELACYSRIEGGDVYFDDRILRLFKRLITEDVGADLNQGFDTFIEKKDLGSQGFGDLLACIRNKNIPLQNIHFVTFRNNLNKIMATAYIRHEPWEMGVHKR---NGVVYLDVHKLPERP--------QSELDRRRCYWGYCFESLATEDPDGDGIHHIDANVEYCSVIKTKLGAHRILM 368 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig112049.2522.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig112049.2522.1 >prot_M-pyrifera_M_contig112049.2522.1 ID=prot_M-pyrifera_M_contig112049.2522.1|Name=mRNA_M-pyrifera_M_contig112049.2522.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=184bp LRGNPPSVRKPEEVGCFHLDGQGKELYGAEAKEHIRSYQTPSLPVDLNERback to top mRNA from alignment at M-pyrifera_M_contig112049:34..585+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig112049.2522.1 ID=mRNA_M-pyrifera_M_contig112049.2522.1|Name=mRNA_M-pyrifera_M_contig112049.2522.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=552bp|location=Sequence derived from alignment at M-pyrifera_M_contig112049:34..585+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig112049:34..585+ >mRNA_M-pyrifera_M_contig112049.2522.1 ID=mRNA_M-pyrifera_M_contig112049.2522.1|Name=mRNA_M-pyrifera_M_contig112049.2522.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1104bp|location=Sequence derived from alignment at M-pyrifera_M_contig112049:34..585+ (Macrocystis pyrifera P11B4 male)back to top |