mRNA_M-pyrifera_M_contig112034.2519.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig112034.2519.1 vs. uniprot
Match: A0A819PQX3_9BILA (Hypothetical protein n=3 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A819PQX3_9BILA) HSP 1 Score: 117 bits (294), Expect = 1.890e-30 Identity = 58/140 (41.43%), Postives = 86/140 (61.43%), Query Frame = 1
Query: 10 TLWHGDFKISNLFVKQPTANSPDGKVYVIDWQWFGKGNPAIDAVYFLYTSLREEDLCHIPSLLEGYFAQFLANLPAEKAGAYSLAQFRHHADVVLVDFCVYTICSKWSVMTLTDFKQYEQKQKDGLHLRSSAHMELILRD 429
TL HGDFK++N+F+ N +G+VY IDWQWFG GN AID YF+ TS+ E + + L+ Y+ + +E +Y +F + +DF +YT+ KWS+M D + Y+Q+QKDGLHLRS HM+ +L++
Sbjct: 47 TLIHGDFKVTNIFIDN---NQIEGQVYAIDWQWFGVGNIAIDVAYFIATSIHENVIENSIELVNYYY-----EILSENGVSYEWERFWKAYQICWIDFFIYTVTGKWSLMRPNDVELYKQEQKDGLHLRSYPHMKHLLKE 178
BLAST of mRNA_M-pyrifera_M_contig112034.2519.1 vs. uniprot
Match: A0A2P6NMM1_9EUKA (Hormonally up-regulated neu tumor-associated kinase-like n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NMM1_9EUKA) HSP 1 Score: 114 bits (284), Expect = 1.630e-26 Identity = 64/142 (45.07%), Postives = 82/142 (57.75%), Query Frame = 1
Query: 7 RTLWHGDFKISNLFVKQPTANSPDGKVYVIDWQWFGKGNPAIDAVYFLYTSLREEDLCHIPSLLEGYFAQFLANLPAEKAGAYSLAQFRHHADVVLVDFCVYTICSKWSVMTLTDFKQYEQKQKDGLHLRSSAHMELILRDA 432
+TL HGD+KISNLFV P+G VY IDWQWFG G A+D YF+ TSL L L YF N+ + +++ Q R + +DF VYT+ +KWS MT D + Y + +KDGLHLRS AHM +L DA
Sbjct: 787 KTLVHGDYKISNLFVP------PEGGVYAIDWQWFGMGPGALDVSYFIATSLSPSLLHRDEHFLFLYFETLRENVELKD---FTMEQLRRQYRLCWLDFFVYTVVAKWSRMTPDDVETYRRGKKDGLHLRSYAHMIKMLHDA 919
BLAST of mRNA_M-pyrifera_M_contig112034.2519.1 vs. uniprot
Match: A0A2P6N9S2_9EUKA (DNA repair protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N9S2_9EUKA) HSP 1 Score: 114 bits (284), Expect = 1.680e-26 Identity = 64/142 (45.07%), Postives = 82/142 (57.75%), Query Frame = 1
Query: 7 RTLWHGDFKISNLFVKQPTANSPDGKVYVIDWQWFGKGNPAIDAVYFLYTSLREEDLCHIPSLLEGYFAQFLANLPAEKAGAYSLAQFRHHADVVLVDFCVYTICSKWSVMTLTDFKQYEQKQKDGLHLRSSAHMELILRDA 432
+TL HGD+KISNLFV P+G VY IDWQWFG G A+D YF+ TSL L L YF N+ + +++ Q R + +DF VYT+ +KWS MT D + Y + +KDGLHLRS AHM +L DA
Sbjct: 1198 KTLVHGDYKISNLFVP------PEGGVYAIDWQWFGMGPGALDVSYFIATSLSPSLLHRDEHFLFLYFETLRENVELKD---FTMEQLRRQYRLCWLDFFVYTVVAKWSRMTPDDVETYRRGKKDGLHLRSYAHMIKMLHDA 1330
BLAST of mRNA_M-pyrifera_M_contig112034.2519.1 vs. uniprot
Match: A0A817T012_9BILA (Hypothetical protein n=1 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A817T012_9BILA) HSP 1 Score: 107 bits (266), Expect = 2.060e-26 Identity = 53/139 (38.13%), Postives = 84/139 (60.43%), Query Frame = 1
Query: 7 RTLWHGDFKISNLFVKQPTANSPDGKVYVIDWQWFGKGNPAIDAVYFLYTSLREEDLCHIPSLLEGYFAQFLANLPAEKAGAYSLAQFRHHADVVLVDFCVYTICSKWSVMTLTDFKQYEQKQKDGLHLRSSAHMELIL 423
RT+ HGD+KI+N+F+ + NS + ++Y IDWQW+G G+ A+D F+ TS+ E I LE +F + + +YS QF + ++F +YT+ WSVM D + Y++++KDGLH+RS AHM+ +L
Sbjct: 31 RTIIHGDYKIANIFIDR---NSDENQIYAIDWQWYGIGHAAMDVASFIATSVHENT---IEDSLE--LVRFYHKVLTDNGISYSWEQFWQAYQICWIEFFIYTVVGLWSVMQANDIESYKKEEKDGLHVRSYAHMKNLL 161
BLAST of mRNA_M-pyrifera_M_contig112034.2519.1 vs. uniprot
Match: A0A815U7X1_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A815U7X1_9BILA) HSP 1 Score: 108 bits (271), Expect = 2.540e-25 Identity = 56/145 (38.62%), Postives = 85/145 (58.62%), Query Frame = 1
Query: 7 RTLWHGDFKISNLFVKQPT-----ANSPDGKVYVIDWQWFGKGNPAIDAVYFLYTSLREEDLCHIPSLLEGYFAQFLAN-LPAEKAGAYSLAQFRHHADVVLVDFCVYTICSKWSVMTLTDFKQYEQKQKDGLHLRSSAHMELIL 423
RTL HGDFKI+N+F+ ++ VY IDWQWFG GN A+D +F+ TS+ E + + LL Y+ L N + AE+ +S +F + + +DF ++T+ +KW M D + Y++++KDGLHLRS HM +L
Sbjct: 250 RTLIHGDFKITNIFINHNNHDFYAESTTTEHVYAIDWQWFGIGNVALDVAHFIATSIHENSIQNSLELLHYYYRTLLENGISAEQ---HSWEKFWKNFQLCWIDFFIFTVVAKWGTMKPNDIELYQKEEKDGLHLRSYPHMRKLL 391
BLAST of mRNA_M-pyrifera_M_contig112034.2519.1 vs. uniprot
Match: A0A821TER0_9BILA (Hypothetical protein n=5 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A821TER0_9BILA) HSP 1 Score: 104 bits (259), Expect = 9.170e-25 Identity = 52/139 (37.41%), Postives = 81/139 (58.27%), Query Frame = 1
Query: 7 RTLWHGDFKISNLFVKQPTANSPDGKVYVIDWQWFGKGNPAIDAVYFLYTSLREEDLCHIPSLLEGYFAQFLANLPAEKAGAYSLAQFRHHADVVLVDFCVYTICSKWSVMTLTDFKQYEQKQKDGLHLRSSAHMELIL 423
RT+ HGD+KI+N+F+ + NS + ++Y IDWQW G G+ A+D F+ TS+ E + L+ Y + N AYS QF + ++F +Y + WSVM D + Y++++KDGLH+RS AHM+ +L
Sbjct: 89 RTIIHGDYKIANIFIDR---NSAESQIYAIDWQWCGIGHVAMDVASFIATSVHENTIEDSLELVRFYHKVLIDN-----GVAYSWEQFWQAYQICWIEFFIYAVVGLWSVMQANDIESYKKEEKDGLHVRSYAHMKNLL 219
BLAST of mRNA_M-pyrifera_M_contig112034.2519.1 vs. uniprot
Match: A0A820LJV0_9BILA (Hypothetical protein n=4 Tax=Rotaria socialis TaxID=392032 RepID=A0A820LJV0_9BILA) HSP 1 Score: 100 bits (249), Expect = 1.580e-23 Identity = 50/139 (35.97%), Postives = 84/139 (60.43%), Query Frame = 1
Query: 7 RTLWHGDFKISNLFVKQPTANSPDGKVYVIDWQWFGKGNPAIDAVYFLYTSLREEDLCHIPSLLEGYFAQFLANLPAEKAGAYSLAQFRHHADVVLVDFCVYTICSKWSVMTLTDFKQYEQKQKDGLHLRSSAHMELIL 423
RT+ HGD+KISN+F+ NS + ++Y IDWQW G G+ A+D YF+ TS+ E + L+ +F N+ + +YS QF ++ ++ +YT+ + WSVM + D + Y++++K GLH+ S +HM+ +L
Sbjct: 63 RTIIHGDYKISNIFIDH---NSTERQIYAIDWQWCGIGHAAMDVAYFIATSVHENTIGDSWELV-----RFYHNVLKDNGISYSWEQFWQAYEISWIEHFIYTVVAFWSVMQVEDIELYKKEEKHGLHICSYSHMKNLL 193
BLAST of mRNA_M-pyrifera_M_contig112034.2519.1 vs. uniprot
Match: A0A822D326_9BILA (Hypothetical protein n=2 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A822D326_9BILA) HSP 1 Score: 102 bits (254), Expect = 8.390e-23 Identity = 51/139 (36.69%), Postives = 80/139 (57.55%), Query Frame = 1
Query: 7 RTLWHGDFKISNLFVKQPTANSPDGKVYVIDWQWFGKGNPAIDAVYFLYTSLREEDLCHIPSLLEGYFAQFLANLPAEKAGAYSLAQFRHHADVVLVDFCVYTICSKWSVMTLTDFKQYEQKQKDGLHLRSSAHMELIL 423
RT+ HGD+KI+N+F+ + NS + ++Y IDWQW G G+ A+D F+ TS+ E + L+ Y + N AY QF + ++F +Y + WSVM D + Y++++KDGLH+RS AHM+ +L
Sbjct: 285 RTIIHGDYKIANIFIDR---NSTESQIYAIDWQWCGIGHVAMDVASFIATSVHENTIEDSLELVRFYHKVLIDN-----GVAYPWEQFWQAYQICWIEFFIYAVVGLWSVMQANDIESYKKEEKDGLHVRSYAHMKNLL 415
BLAST of mRNA_M-pyrifera_M_contig112034.2519.1 vs. uniprot
Match: A0A7S4I9Q2_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4I9Q2_9EUKA) HSP 1 Score: 87.0 bits (214), Expect = 3.410e-17 Identity = 50/143 (34.97%), Postives = 74/143 (51.75%), Query Frame = 1
Query: 1 RFRTLWHGDFKISNLFVKQPTANSPDGK-------VYVIDWQWFGKGNPAIDAVYFLYTSLREEDLCHIPSLLEGYFAQFLANLPAEKAGAYSLAQFRHHADVVLVDFCVYTICSKWSVMTLTDFKQYEQKQKDGLHLRSSAH 408
+ +T+ HGD+KISN+F+ + TA K VYVIDWQW G G A+D Y+L TS + + S ++ + + L + Y+ + + VDF VY I KW+ M +DF + + KDGLH+RS H
Sbjct: 325 KLKTIVHGDYKISNIFLDRRTATQTKAKYSHHSDSVYVIDWQWVGLGIGAVDVAYYLATSTVLDTVQK--SSMKKLVKLYHSILVEKGVKNYTFKEMWMDFRLAFVDFVVYVISCKWTAMMPSDFLSNQAQLKDGLHIRSLVH 465 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig112034.2519.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig112034.2519.1 >prot_M-pyrifera_M_contig112034.2519.1 ID=prot_M-pyrifera_M_contig112034.2519.1|Name=mRNA_M-pyrifera_M_contig112034.2519.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=147bp RFRTLWHGDFKISNLFVKQPTANSPDGKVYVIDWQWFGKGNPAIDAVYFLback to top mRNA from alignment at M-pyrifera_M_contig112034:106..546- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig112034.2519.1 ID=mRNA_M-pyrifera_M_contig112034.2519.1|Name=mRNA_M-pyrifera_M_contig112034.2519.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=441bp|location=Sequence derived from alignment at M-pyrifera_M_contig112034:106..546- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig112034:106..546- >mRNA_M-pyrifera_M_contig112034.2519.1 ID=mRNA_M-pyrifera_M_contig112034.2519.1|Name=mRNA_M-pyrifera_M_contig112034.2519.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=882bp|location=Sequence derived from alignment at M-pyrifera_M_contig112034:106..546- (Macrocystis pyrifera P11B4 male)back to top |