mRNA_M-pyrifera_M_contig112029.2517.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig112029.2517.1 vs. uniprot
Match: A0A8J9YMA3_BRALA (SH3KBP1 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9YMA3_BRALA) HSP 1 Score: 100 bits (248), Expect = 1.570e-21 Identity = 52/114 (45.61%), Postives = 68/114 (59.65%), Query Frame = 1
Query: 184 PVAKAGPKIRATATYDYAAAEDNELSFDVGDVIEVSKQDPSGWWEGSCKGRTGMFPGNYVEVIAEEAPAPAKAXXXXXXXXAATRKCLVKFDFTAENDDELTIVVGQTIIIVSE 525
P A+ K+R A Y YA +EL +VGDVIE+ KQ+ GWWEGS G++G+FP N+VEVI EE + K V FD+ AEN+DELT+ VG+ III S+
Sbjct: 109 PQAEKTRKLRCKAHYSYAPENTDELRLEVGDVIEILKQEEEGWWEGSLNGKSGVFPSNFVEVIKEEDKENIEEQQKEKTASKPVEKAKVLFDYNAENEDELTLKVGEVIIIRSK 222
BLAST of mRNA_M-pyrifera_M_contig112029.2517.1 vs. uniprot
Match: A0A6P8IYL2_ACTTE (CD2-associated protein-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8IYL2_ACTTE) HSP 1 Score: 78.2 bits (191), Expect = 2.520e-14 Identity = 42/105 (40.00%), Postives = 61/105 (58.10%), Query Frame = 1
Query: 211 RATATYDYAAAEDNELSFDVGDVIEVSKQDPSGWWEGSCKGRTGMFPGNYVEVIAEEAPAPAKAXXXXXXXXAATRKCLVKFDFTAENDDELTIVVGQTIIIVSE 525
RA T+DY A E++EL +G +IE + GW +G G+TG+FP N+VE IA EAP +K A +K V FD+ A N+DEL++ G+ I ++ E
Sbjct: 4 RARVTFDYKATENDELDLAIGQIIEDITDEDEGWCKGFLDGKTGLFPNNFVEFIAGEAPPHSKPPSKDSL---AGKKAKVLFDYDALNEDELSLRDGEIIEVICE 105
BLAST of mRNA_M-pyrifera_M_contig112029.2517.1 vs. uniprot
Match: A0A7R9CL95_TIMCR (Hypothetical protein n=1 Tax=Timema cristinae TaxID=61476 RepID=A0A7R9CL95_TIMCR) HSP 1 Score: 76.3 bits (186), Expect = 6.030e-14 Identity = 39/107 (36.45%), Postives = 58/107 (54.21%), Query Frame = 1
Query: 205 KIRATATYDYAAAEDNELSFDVGDVIEVSKQDPSGWWEGSCKGRTGMFPGNYVEVIAEEAPAPAKAXXXXXXXXAATRKCLVKFDFTAENDDELTIVVGQTIIIVSE 525
++ A +DY A E +ELS GD+I + P GWWEGS +G+ GMFP N+++V +E ++A R+C V F + N+DEL + V I +V E
Sbjct: 22 EVEAVVEFDYVAHEPDELSLRKGDIITNIRTQPGGWWEGSLRGKRGMFPDNFIKVQSE-----SEASFQDVTLRRWGRRCRVLFSYQPANEDELALQVNDVIEVVGE 123
BLAST of mRNA_M-pyrifera_M_contig112029.2517.1 vs. uniprot
Match: A0A7R8USE8_HERIL (Hypothetical protein n=3 Tax=Hermetia illucens TaxID=343691 RepID=A0A7R8USE8_HERIL) HSP 1 Score: 77.4 bits (189), Expect = 2.320e-13 Identity = 41/108 (37.96%), Postives = 59/108 (54.63%), Query Frame = 1
Query: 208 IRATATYDYAAAEDNELSFDVGDVIEVSKQDPSGWWEGSC--KGRTGMFPGNYVEVIAEEAPAPAKAXXXXXXXXAATRKCLVKFDFTAENDDELTIVVGQTIIIVSE 525
+ A YDY+A E +EL G +I K P GWWEG+ GRTGMFP N+V +I + +P A R+C V + +T +N+DEL++ VG I ++ E
Sbjct: 8 VSAVVDYDYSANEPDELDLVKGAIIHNIKIQPGGWWEGTLASNGRTGMFPDNFVHIIDPDEKSPV---VLRDKSATAHRRCKVIYSYTQQNEDELSLAVGNIIEVLGE 112
BLAST of mRNA_M-pyrifera_M_contig112029.2517.1 vs. uniprot
Match: UPI001ED8B2D0 (CD2-associated protein isoform X1 n=3 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED8B2D0) HSP 1 Score: 77.4 bits (189), Expect = 2.340e-13 Identity = 41/109 (37.61%), Postives = 60/109 (55.05%), Query Frame = 1
Query: 208 IRATATYDYAAAEDNELSFDVGDVIEVSKQDP-SGWWEGSCKGRTGMFPGNYVEVIAEEAPAPAKAXXXXXXXX--AATRKCLVKFDFTAENDDELTIVVGQTIIIVSE 525
+ A +DYAA +EL+ GD+I K +P +GWWEGS KGR G+FP N+V+VI ++AP + + R+C F + N+DEL + V I +SE
Sbjct: 2 VEALVEFDYAAQAPDELTLKKGDIITAIKTEPGNGWWEGSLKGRRGLFPDNFVKVIKKDAPTESHKDEKNGVVLRSGSKRRCRAIFSYKPVNEDELELKVNDLIEFISE 110
BLAST of mRNA_M-pyrifera_M_contig112029.2517.1 vs. uniprot
Match: A0A8C2XQH1_CYCLU (SH3 domain containing 19 n=3 Tax=Cyclopterus lumpus TaxID=8103 RepID=A0A8C2XQH1_CYCLU) HSP 1 Score: 76.6 bits (187), Expect = 4.490e-13 Identity = 37/104 (35.58%), Postives = 53/104 (50.96%), Query Frame = 1
Query: 199 GPKIRATATYDYAAAEDNELSFDVGDVIEVSKQDPSGWWEGSCKGRTGMFPGNYVEVIAEEAPAPAKAXXXXXXXXAATRKCLVKFDFTAENDDELTIVVGQTI 510
G ++ A +D+ + EL GDV + +Q S W+ G+CKG TG FP NYV+V++ K + +C+ KFDF END+ELT G I
Sbjct: 770 GSELEVQAIHDFTPVGEGELGLRAGDVATMVEQVDSDWYRGTCKGSTGFFPTNYVKVLSNSPKPLPKRKARPPSAAVSGPRCVAKFDFAGENDEELTFSEGDVI 873
BLAST of mRNA_M-pyrifera_M_contig112029.2517.1 vs. uniprot
Match: UPI00155E8823 (SH3 domain-containing protein 19 isoform X1 n=4 Tax=Etheostoma TaxID=54318 RepID=UPI00155E8823) HSP 1 Score: 76.3 bits (186), Expect = 6.090e-13 Identity = 39/111 (35.14%), Postives = 60/111 (54.05%), Query Frame = 1
Query: 178 AAPVAKAGPKIRATATYDYAAAEDNELSFDVGDVIEVSKQDPSGWWEGSCKGRTGMFPGNYVEVIAEEAPAPAKAXXXXXXXXAATRKCLVKFDFTAENDDELTIVVGQTI 510
A+P AG +++ A +D+ EL+ GDV+ + +Q S W+ G+C+G TG FP NYV+V++ + A+ +C+ KFDF AEN DEL+ G I
Sbjct: 734 ASPAGGAGNELKVQAIHDFNPEGPGELALRAGDVVTMVEQLDSEWYTGTCRGSTGFFPVNYVKVLSNSPKPLPERKARPPPATASGPRCVAKFDFEAENSDELSFSEGDVI 844
BLAST of mRNA_M-pyrifera_M_contig112029.2517.1 vs. uniprot
Match: A0A5N5NI56_PANHP (Uncharacterized protein n=2 Tax=Siluroidei TaxID=1489793 RepID=A0A5N5NI56_PANHP) HSP 1 Score: 76.3 bits (186), Expect = 6.120e-13 Identity = 36/64 (56.25%), Postives = 45/64 (70.31%), Query Frame = 1
Query: 181 APVAKAGPKIRATATYDYAAAEDNELSFDVGDVIEVSKQDPSGWWEGSCKGRTGMFPGNYVEVI 372
AP GP+ RA Y Y + +ELSFDVGDVI++ K+DPSGWW G +G+ G+FPGNYVE I
Sbjct: 1030 APPRPQGPRCRAL--YQYVGQDVDELSFDVGDVIDLIKEDPSGWWTGRMRGKEGLFPGNYVEKI 1091
BLAST of mRNA_M-pyrifera_M_contig112029.2517.1 vs. uniprot
Match: A0A4Z2FHL1_9TELE (Unconventional myosin-If n=1 Tax=Liparis tanakae TaxID=230148 RepID=A0A4Z2FHL1_9TELE) HSP 1 Score: 73.2 bits (178), Expect = 7.730e-13 Identity = 33/58 (56.90%), Postives = 41/58 (70.69%), Query Frame = 1
Query: 199 GPKIRATATYDYAAAEDNELSFDVGDVIEVSKQDPSGWWEGSCKGRTGMFPGNYVEVI 372
GP+ RA Y YA + +E+SF+V DV E+ K DPSGWW G KG+ G+FPGNYVE I
Sbjct: 142 GPRCRAL--YQYAGQDTDEISFEVNDVFELLKDDPSGWWTGRIKGKEGLFPGNYVEKI 197
BLAST of mRNA_M-pyrifera_M_contig112029.2517.1 vs. uniprot
Match: C3ZNR9_BRAFL (Uncharacterized protein n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3ZNR9_BRAFL) HSP 1 Score: 75.1 bits (183), Expect = 9.430e-13 Identity = 35/66 (53.03%), Postives = 45/66 (68.18%), Query Frame = 1
Query: 184 PVAKAGPKIRATATYDYAAAEDNELSFDVGDVIEVSKQDPSGWWEGSCKGRTGMFPGNYVEVIAEE 381
P A+ K+R A Y YA +EL +VGDVIE+ KQ+ GWWEGS G++G+FP N+VEVI EE
Sbjct: 117 PQAEKTRKLRCKAQYSYAPENMDELRLEVGDVIEILKQEEEGWWEGSLNGKSGVFPSNFVEVIKEE 182 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig112029.2517.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig112029.2517.1 >prot_M-pyrifera_M_contig112029.2517.1 ID=prot_M-pyrifera_M_contig112029.2517.1|Name=mRNA_M-pyrifera_M_contig112029.2517.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=176bp KPAEYEPYKWNHSHLDTGNSGPKAKKSSKSSRSSSSATSARSVAKSSSRSback to top mRNA from alignment at M-pyrifera_M_contig112029:2..529- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig112029.2517.1 ID=mRNA_M-pyrifera_M_contig112029.2517.1|Name=mRNA_M-pyrifera_M_contig112029.2517.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=528bp|location=Sequence derived from alignment at M-pyrifera_M_contig112029:2..529- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig112029:2..529- >mRNA_M-pyrifera_M_contig112029.2517.1 ID=mRNA_M-pyrifera_M_contig112029.2517.1|Name=mRNA_M-pyrifera_M_contig112029.2517.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1056bp|location=Sequence derived from alignment at M-pyrifera_M_contig112029:2..529- (Macrocystis pyrifera P11B4 male)back to top |