mRNA_M-pyrifera_M_contig111975.2511.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig111975.2511.1
Unique NamemRNA_M-pyrifera_M_contig111975.2511.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig111975.2511.1 vs. uniprot
Match: A0A319EHH6_ASPSB (Uncharacterized protein n=2 Tax=Aspergillus TaxID=5052 RepID=A0A319EHH6_ASPSB)

HSP 1 Score: 93.2 bits (230), Expect = 5.090e-20
Identity = 47/95 (49.47%), Postives = 65/95 (68.42%), Query Frame = 1
Query:    1 FINHSCAPNCRVEKWNVDGESRIAIVAGDRAIPKETELTYDYKF--FTAKPIR-CSCGAAECRGYLGMNIAREHAVKAKESRLLSRWQAATKGRN 276
            F+NHSC PNCR+EKW V G+ R+A+ AGDR I    ELTYDY F  ++ K ++ C CG++ CRG LG    +E   +AKES++ ++ +A TK RN
Sbjct:  549 FVNHSCEPNCRMEKWTVAGKPRMALFAGDRGIMTGEELTYDYNFDPYSQKNVQQCRCGSSNCRGILGPR-PKEKDQRAKESKVETQKKARTKRRN 642          
BLAST of mRNA_M-pyrifera_M_contig111975.2511.1 vs. uniprot
Match: M7T5X8_EUTLA (Putative set domain-containing protein n=1 Tax=Eutypa lata (strain UCR-EL1) TaxID=1287681 RepID=M7T5X8_EUTLA)

HSP 1 Score: 90.5 bits (223), Expect = 4.470e-19
Identity = 43/82 (52.44%), Postives = 56/82 (68.29%), Query Frame = 1
Query:    1 FINHSCAPNCRVEKWNVDGESRIAIVAGDRAIPKETELTYDYKF--FTAKPI-RCSCGAAECRGYLGMNIAREHAVKAKESR 237
            F+NHSC PNCR+ KW V G+ R+A+ AGDR I    ELTYDYKF  F+AK + +C CG+A+CRG LG        +K K+S+
Sbjct:  554 FVNHSCEPNCRMIKWIVSGQPRMALFAGDRPITTGEELTYDYKFDPFSAKNVQKCLCGSAKCRGVLGPKPKEPKQLKPKDSK 635          
BLAST of mRNA_M-pyrifera_M_contig111975.2511.1 vs. uniprot
Match: H6C8K5_EXODN (Histone-lysine N-methyltransferase ASH1L n=1 Tax=Exophiala dermatitidis (strain ATCC 34100 / CBS 525.76 / NIH/UT8656) TaxID=858893 RepID=H6C8K5_EXODN)

HSP 1 Score: 90.1 bits (222), Expect = 6.100e-19
Identity = 42/80 (52.50%), Postives = 53/80 (66.25%), Query Frame = 1
Query:    1 FINHSCAPNCRVEKWNVDGESRIAIVAGDRAIPKETELTYDYKF--FTAKPIR-CSCGAAECRGYLGMNIAREHAVKAKE 231
            F+NHSCAPNCR+EKW V+G+ R+A+ AGDR I    ELTYDY F  ++ K ++ C CGA  CRG LG     E   K+ E
Sbjct:  536 FVNHSCAPNCRMEKWTVNGKPRMALFAGDRGIMTGEELTYDYNFDPYSQKNVQVCRCGAENCRGVLGPRSKEERKQKSPE 615          
BLAST of mRNA_M-pyrifera_M_contig111975.2511.1 vs. uniprot
Match: A1D864_NEOFI (Histone-lysine N-methyltransferase (Ash1), putative n=16 Tax=Aspergillus TaxID=5052 RepID=A1D864_NEOFI)

HSP 1 Score: 90.1 bits (222), Expect = 6.130e-19
Identity = 44/91 (48.35%), Postives = 61/91 (67.03%), Query Frame = 1
Query:    1 FINHSCAPNCRVEKWNVDGESRIAIVAGDRAIPKETELTYDYKF--FTAKPIR-CSCGAAECRGYLGMNIAREHAVKAKESRLLSRWQAAT 264
            F+NHSC PNCR+EKW V G+ R+A+ AGD  I    ELTYDY F  ++ K ++ C CGA+ CRG LG    RE   ++KES+++S+ +  T
Sbjct:  544 FVNHSCEPNCRMEKWTVAGKPRMALFAGDHGIMTGEELTYDYNFDPYSQKNVQQCRCGASNCRGILGPR-PREKDQRSKESKIISQKKTTT 633          
BLAST of mRNA_M-pyrifera_M_contig111975.2511.1 vs. uniprot
Match: A5ABN5_ASPNC (Aspergillus niger contig An11c0340, genomic contig n=10 Tax=Aspergillus TaxID=5052 RepID=A5ABN5_ASPNC)

HSP 1 Score: 89.7 bits (221), Expect = 8.390e-19
Identity = 45/95 (47.37%), Postives = 62/95 (65.26%), Query Frame = 1
Query:    1 FINHSCAPNCRVEKWNVDGESRIAIVAGDRAIPKETELTYDYKF--FTAKPIR-CSCGAAECRGYLGMNIAREHAVKAKESRLLSRWQAATKGRN 276
            F+NHSC PNCR+EKW V G+ R+A+ AGDR I    ELTYDY F  ++ K ++ C CG++ CRG LG    +E   +AKE ++    ++ATK  N
Sbjct:  512 FVNHSCEPNCRMEKWTVAGKPRMALFAGDRGIMTGEELTYDYNFDPYSQKNVQQCRCGSSNCRGILGPR-PKEKVQRAKEQKVEKSKKSATKRAN 605          
BLAST of mRNA_M-pyrifera_M_contig111975.2511.1 vs. uniprot
Match: A0A100INY7_ASPNG (Histone-lysine N-methyltransferase n=12 Tax=Aspergillus TaxID=5052 RepID=A0A100INY7_ASPNG)

HSP 1 Score: 89.4 bits (220), Expect = 1.140e-18
Identity = 45/95 (47.37%), Postives = 63/95 (66.32%), Query Frame = 1
Query:    1 FINHSCAPNCRVEKWNVDGESRIAIVAGDRAIPKETELTYDYKF--FTAKPIR-CSCGAAECRGYLGMNIAREHAVKAKESRLLSRWQAATKGRN 276
            F+NHSC PNCR+EKW V G+ R+A+ AGDR I    ELTYDY F  ++ K ++ C CG++ CRG LG    +E A +AKE ++    ++A+K  N
Sbjct:  552 FVNHSCEPNCRMEKWTVAGKPRMALFAGDRGIMTGEELTYDYNFDPYSQKNVQQCRCGSSNCRGILGPR-PKEKAQRAKEQKVEKPKKSASKRTN 645          
BLAST of mRNA_M-pyrifera_M_contig111975.2511.1 vs. uniprot
Match: A0A0D2EIH9_9EURO (Uncharacterized protein n=2 Tax=cellular organisms TaxID=131567 RepID=A0A0D2EIH9_9EURO)

HSP 1 Score: 88.6 bits (218), Expect = 2.120e-18
Identity = 40/80 (50.00%), Postives = 52/80 (65.00%), Query Frame = 1
Query:    1 FINHSCAPNCRVEKWNVDGESRIAIVAGDRAIPKETELTYDYKF--FTAKPIR-CSCGAAECRGYLGMNIAREHAVKAKE 231
            F+NHSCAPNCR+EKW V+G+ R+A+ AGDR +    ELTYDY F  ++ K ++ C CGA  CRG LG     +   K  E
Sbjct:  523 FVNHSCAPNCRMEKWTVNGKPRMALFAGDRGVMTGEELTYDYNFDPYSQKNVQACRCGAENCRGVLGPRTKEDRKQKTPE 602          
BLAST of mRNA_M-pyrifera_M_contig111975.2511.1 vs. uniprot
Match: A0A421DHY1_9EURO (Uncharacterized protein n=8 Tax=Aspergillus TaxID=5052 RepID=A0A421DHY1_9EURO)

HSP 1 Score: 88.6 bits (218), Expect = 2.130e-18
Identity = 44/91 (48.35%), Postives = 60/91 (65.93%), Query Frame = 1
Query:    1 FINHSCAPNCRVEKWNVDGESRIAIVAGDRAIPKETELTYDYKF--FTAKPIR-CSCGAAECRGYLGMNIAREHAVKAKESRLLSRWQAAT 264
            F+NHSC PNCR+EKW V G+ R+A+ AGD  I    ELTYDY F  ++ K ++ C CGA+ CRG LG    RE   ++KES+ +S+   +T
Sbjct:  544 FVNHSCEPNCRMEKWTVAGKPRMALFAGDHGIMTGEELTYDYNFDPYSQKNVQQCRCGASNCRGILGPR-PREKDQRSKESKSISQKNTST 633          
BLAST of mRNA_M-pyrifera_M_contig111975.2511.1 vs. uniprot
Match: UPI001B359BFB (Set2, histone methyltransferase n=1 Tax=Cryphonectria parasitica EP155 TaxID=660469 RepID=UPI001B359BFB)

HSP 1 Score: 88.6 bits (218), Expect = 2.140e-18
Identity = 42/80 (52.50%), Postives = 55/80 (68.75%), Query Frame = 1
Query:    1 FINHSCAPNCRVEKWNVDGESRIAIVAGDRAIPKETELTYDYKF--FTAKPI-RCSCGAAECRGYLGMNIAREHAVKAKE 231
            F+NHSC PNCR+EKW V G+ R+A+ AGD+ I    ELTYDY F  F+AK + +C CG+A CRG LG   A+    +AK+
Sbjct:  633 FVNHSCDPNCRMEKWIVHGQPRMALFAGDKPIMSGDELTYDYNFDPFSAKNVQKCLCGSANCRGVLGPKAAKVPKGQAKK 712          
BLAST of mRNA_M-pyrifera_M_contig111975.2511.1 vs. uniprot
Match: W9YF11_9EURO (Histone-lysine N-methyltransferase ASH1L n=1 Tax=Capronia coronata CBS 617.96 TaxID=1182541 RepID=W9YF11_9EURO)

HSP 1 Score: 88.2 bits (217), Expect = 2.890e-18
Identity = 41/80 (51.25%), Postives = 53/80 (66.25%), Query Frame = 1
Query:    1 FINHSCAPNCRVEKWNVDGESRIAIVAGDRAIPKETELTYDYKF--FTAKPIR-CSCGAAECRGYLGMNIAREHAVKAKE 231
            F+NHSCAPNCR+EKW V+G+ R+A+ AGDR I    EL+YDY F  ++ K ++ C CGA  CRG LG     E   K+ E
Sbjct:  535 FVNHSCAPNCRMEKWTVNGKPRMALFAGDRGIMTGEELSYDYNFDPYSLKNVQVCHCGAENCRGVLGPRPKEERKQKSPE 614          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig111975.2511.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A319EHH6_ASPSB5.090e-2049.47Uncharacterized protein n=2 Tax=Aspergillus TaxID=... [more]
M7T5X8_EUTLA4.470e-1952.44Putative set domain-containing protein n=1 Tax=Eut... [more]
H6C8K5_EXODN6.100e-1952.50Histone-lysine N-methyltransferase ASH1L n=1 Tax=E... [more]
A1D864_NEOFI6.130e-1948.35Histone-lysine N-methyltransferase (Ash1), putativ... [more]
A5ABN5_ASPNC8.390e-1947.37Aspergillus niger contig An11c0340, genomic contig... [more]
A0A100INY7_ASPNG1.140e-1847.37Histone-lysine N-methyltransferase n=12 Tax=Asperg... [more]
A0A0D2EIH9_9EURO2.120e-1850.00Uncharacterized protein n=2 Tax=cellular organisms... [more]
A0A421DHY1_9EURO2.130e-1848.35Uncharacterized protein n=8 Tax=Aspergillus TaxID=... [more]
UPI001B359BFB2.140e-1852.50Set2, histone methyltransferase n=1 Tax=Cryphonect... [more]
W9YF11_9EURO2.890e-1851.25Histone-lysine N-methyltransferase ASH1L n=1 Tax=C... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig111975contigM-pyrifera_M_contig111975:290..586 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score90.1
Seed ortholog evalue6.2e-16
Seed eggNOG ortholog36630.CADNFIAP00005425
KEGG rclassRC00003,RC00060,RC00181,RC00496
KEGG koko:K06101,ko:K16675
KEGG ReactionR03875,R03938,R04866,R04867
KEGG Pathwayko00310,ko04391,map00310,map04391
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Histone-lysine N-methyltransferase ash1
EggNOG OGs20BCH@147545,38HZ1@33154,3NYRQ@4751,3QMGW@4890,3S507@5042,COG2940@1,KOG1083@2759
EC2.1.1.43,2.3.1.225
COG Functional cat.K
Best tax levelEurotiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03036
Exons1
Model size297
Cds size297
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815633.5886261-CDS-M-pyrifera_M_contig111975:289..5861622815633.5886261-CDS-M-pyrifera_M_contig111975:289..586Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig111975 290..586 -
1692277497.2735465-CDS-M-pyrifera_M_contig111975:289..5861692277497.2735465-CDS-M-pyrifera_M_contig111975:289..586Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig111975 290..586 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig111975.2511.1prot_M-pyrifera_M_contig111975.2511.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig111975 290..586 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig111975.2511.1

>prot_M-pyrifera_M_contig111975.2511.1 ID=prot_M-pyrifera_M_contig111975.2511.1|Name=mRNA_M-pyrifera_M_contig111975.2511.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=99bp
FINHSCAPNCRVEKWNVDGESRIAIVAGDRAIPKETELTYDYKFFTAKPI
RCSCGAAECRGYLGMNIAREHAVKAKESRLLSRWQAATKGRNLTKEDKA
back to top

mRNA from alignment at M-pyrifera_M_contig111975:290..586-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig111975.2511.1 ID=mRNA_M-pyrifera_M_contig111975.2511.1|Name=mRNA_M-pyrifera_M_contig111975.2511.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=297bp|location=Sequence derived from alignment at M-pyrifera_M_contig111975:290..586- (Macrocystis pyrifera P11B4 male)
TTTATCAACCACAGCTGCGCGCCAAACTGCCGCGTGGAGAAGTGGAACGT GGATGGAGAGTCTAGGATCGCCATTGTGGCCGGAGATAGAGCGATTCCGA AAGAAACGGAGTTGACGTACGATTACAAGTTTTTCACCGCAAAACCCATT CGATGCTCCTGTGGCGCTGCAGAGTGCCGGGGCTACTTGGGCATGAACAT TGCGCGAGAGCACGCGGTGAAAGCAAAGGAATCGAGGCTGCTGTCACGCT GGCAAGCCGCCACAAAGGGCAGAAACCTCACCAAGGAGGACAAGGCG
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig111975:290..586-

>mRNA_M-pyrifera_M_contig111975.2511.1 ID=mRNA_M-pyrifera_M_contig111975.2511.1|Name=mRNA_M-pyrifera_M_contig111975.2511.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=594bp|location=Sequence derived from alignment at M-pyrifera_M_contig111975:290..586- (Macrocystis pyrifera P11B4 male)
TTTATCAACCACAGCTGCGCGCCAAACTGCCGCGTGGAGAAGTGGAACGT
GGATGGAGAGTCTAGGATCGCCATTGTGGCCGGAGATAGAGCGATTCCGA
AAGAAACGGAGTTGACGTACGATTACAAGTTTTTCACCGCAAAACCCATT
CGATGCTCCTGTGGCGCTGCAGAGTGCCGGGGCTACTTGGGCATGAACAT
TGCGCGAGAGCACGCGGTGAAAGCAAAGGAATCGAGGCTGCTGTCACGCT
GGCAAGCCGCCACAAAGGGCAGAAACCTCACCAAGGAGGACAAGGCGTTT
ATCAACCACAGCTGCGCGCCAAACTGCCGCGTGGAGAAGTGGAACGTGGA
TGGAGAGTCTAGGATCGCCATTGTGGCCGGAGATAGAGCGATTCCGAAAG
AAACGGAGTTGACGTACGATTACAAGTTTTTCACCGCAAAACCCATTCGA
TGCTCCTGTGGCGCTGCAGAGTGCCGGGGCTACTTGGGCATGAACATTGC
GCGAGAGCACGCGGTGAAAGCAAAGGAATCGAGGCTGCTGTCACGCTGGC
AAGCCGCCACAAAGGGCAGAAACCTCACCAAGGAGGACAAGGCG
back to top