mRNA_M-pyrifera_M_contig111964.2506.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig111964.2506.1 vs. uniprot
Match: A0A7C8ERU6_9BACT (Glycosyltransferase family 9 protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7C8ERU6_9BACT) HSP 1 Score: 82.0 bits (201), Expect = 1.100e-16 Identity = 40/57 (70.18%), Postives = 49/57 (85.96%), Query Frame = 1
Query: 28 MRILVAQVTRMGDMLQTTPMIRAIKHENPGASITVMVRDMGRIIAERNPDIDDVIVY 198
MRILVAQ+TRMGD+LQT+P+I A+K ++P A IT MVR MG+ I ERNPD+DDVIVY
Sbjct: 2 MRILVAQMTRMGDVLQTSPLICALKQQHPDAHITAMVRRMGKPIVERNPDVDDVIVY 58
BLAST of mRNA_M-pyrifera_M_contig111964.2506.1 vs. uniprot
Match: A0A7Y5C6J7_9BACT (Glycosyltransferase family 9 protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7Y5C6J7_9BACT) HSP 1 Score: 82.0 bits (201), Expect = 1.100e-16 Identity = 40/56 (71.43%), Postives = 48/56 (85.71%), Query Frame = 1
Query: 31 RILVAQVTRMGDMLQTTPMIRAIKHENPGASITVMVRDMGRIIAERNPDIDDVIVY 198
RILVAQ+TRMGD+LQT+P++RA+K +P A IT MVR MG+ IAE NPDIDDVIVY
Sbjct: 5 RILVAQMTRMGDVLQTSPLVRALKQRHPDAHITAMVRRMGKAIAECNPDIDDVIVY 60
BLAST of mRNA_M-pyrifera_M_contig111964.2506.1 vs. uniprot
Match: A0A831UIR7_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A831UIR7_9BACT) HSP 1 Score: 75.1 bits (183), Expect = 1.400e-15 Identity = 35/57 (61.40%), Postives = 46/57 (80.70%), Query Frame = 1
Query: 28 MRILVAQVTRMGDMLQTTPMIRAIKHENPGASITVMVRDMGRIIAERNPDIDDVIVY 198
MR+LV Q TRMGD+LQT+P+IR I+ +P A I V+VR MG+ I ERNPD+D+VIV+
Sbjct: 1 MRVLVLQTTRMGDVLQTSPLIRGIRRNDPDAHIAVVVRRMGKAIVERNPDVDEVIVH 57
BLAST of mRNA_M-pyrifera_M_contig111964.2506.1 vs. uniprot
Match: A0A7V2Y6Y3_9BACT (Uncharacterized protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7V2Y6Y3_9BACT) HSP 1 Score: 73.6 bits (179), Expect = 1.060e-13 Identity = 35/57 (61.40%), Postives = 47/57 (82.46%), Query Frame = 1
Query: 28 MRILVAQVTRMGDMLQTTPMIRAIKHENPGASITVMVRDMGRIIAERNPDIDDVIVY 198
MRILV Q TRMGD+LQTTP+IRA++ + P A I MVR+MG+ +A RNPDI++V+V+
Sbjct: 1 MRILVMQTTRMGDVLQTTPLIRALRRKYPDAHIACMVRNMGKAVALRNPDINEVLVH 57
BLAST of mRNA_M-pyrifera_M_contig111964.2506.1 vs. uniprot
Match: A0A7V2X7C8_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7V2X7C8_9BACT) HSP 1 Score: 70.5 bits (171), Expect = 1.200e-13 Identity = 32/56 (57.14%), Postives = 45/56 (80.36%), Query Frame = 1
Query: 31 RILVAQVTRMGDMLQTTPMIRAIKHENPGASITVMVRDMGRIIAERNPDIDDVIVY 198
R+L+ Q TRMGD LQT+P+IR ++ P A I VMVR+MG+ IAER+PD+++VI+Y
Sbjct: 3 RVLIMQTTRMGDTLQTSPLIRQVRQTWPDAHIAVMVRNMGKTIAERHPDVNEVILY 58
BLAST of mRNA_M-pyrifera_M_contig111964.2506.1 vs. uniprot
Match: A0A7C4UWV4_9BACT (Glycosyltransferase family 9 protein (Fragment) n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7C4UWV4_9BACT) HSP 1 Score: 62.8 bits (151), Expect = 6.510e-10 Identity = 29/57 (50.88%), Postives = 42/57 (73.68%), Query Frame = 1
Query: 28 MRILVAQVTRMGDMLQTTPMIRAIKHENPGASITVMVRDMGRIIAERNPDIDDVIVY 198
M ILV Q R+GD LQTTP++R I+ + P ++IT+M+R M +A+ NPDI+D I+Y
Sbjct: 1 MNILVLQTARIGDTLQTTPLLRNIRKKYPESNITLMIRPMSEPVAKANPDINDYIIY 57
BLAST of mRNA_M-pyrifera_M_contig111964.2506.1 vs. uniprot
Match: A0A254TGW2_9BURK (Glycosyl transferase n=1 Tax=Noviherbaspirillum denitrificans TaxID=1968433 RepID=A0A254TGW2_9BURK) HSP 1 Score: 56.6 bits (135), Expect = 9.530e-8 Identity = 29/65 (44.62%), Postives = 39/65 (60.00%), Query Frame = 1
Query: 4 IGGTRELTMRILVAQVTRMGDMLQTTPMIRAIKHENPGASITVMVRDMGRIIAERNPDIDDVIVY 198
I G+ E RIL ++ MGD+L TTP IRA++ PG IT++ G +A P+IDD IVY
Sbjct: 2 IAGSWEQVKRILCIRLDYMGDVLMTTPAIRALRQSLPGCEITLLTSGSGAAVARYIPEIDDTIVY 66
BLAST of mRNA_M-pyrifera_M_contig111964.2506.1 vs. uniprot
Match: A0A1G1MN01_9BACT (Lipopolysaccharide heptosyltransferase II (Fragment) n=1 Tax=Omnitrophica WOR_2 bacterium RBG_13_44_8b TaxID=1801836 RepID=A0A1G1MN01_9BACT) HSP 1 Score: 55.8 bits (133), Expect = 1.830e-7 Identity = 27/63 (42.86%), Postives = 43/63 (68.25%), Query Frame = 1
Query: 10 GTRELTMRILVAQVTRMGDMLQTTPMIRAIKHENPGASITVMVRDMGRIIAERNPDIDDVIVY 198
G+REL RIL+ + ++GD+L +TP+I+A++ P A I +MV + I E NP +D+VI+Y
Sbjct: 136 GSRELYKRILIVRTDKIGDVLLSTPVIKALRENYPNAYIAMMVCPYTKDIVEDNPYLDEVIIY 198
BLAST of mRNA_M-pyrifera_M_contig111964.2506.1 vs. uniprot
Match: A0A496RLM2_9BACT (Lipopolysaccharide heptosyltransferase II n=1 Tax=Candidatus Omnitrophica bacterium TaxID=2035772 RepID=A0A496RLM2_9BACT) HSP 1 Score: 55.1 bits (131), Expect = 3.450e-7 Identity = 26/62 (41.94%), Postives = 42/62 (67.74%), Query Frame = 1
Query: 13 TRELTMRILVAQVTRMGDMLQTTPMIRAIKHENPGASITVMVRDMGRIIAERNPDIDDVIVY 198
TR RIL+ + R+GD+L +TP+I+A++ PGA + +MVR + I E NP +D++I+Y
Sbjct: 334 TRSNFQRILIVRTDRIGDVLLSTPVIKALRDAYPGAYLAMMVRPYTKEIIEGNPYLDEIIIY 395
BLAST of mRNA_M-pyrifera_M_contig111964.2506.1 vs. uniprot
Match: A0A1F4QUY4_9BACT (Uncharacterized protein (Fragment) n=1 Tax=candidate division NC10 bacterium RIFCSPLOWO2_12_FULL_66_18 TaxID=1801659 RepID=A0A1F4QUY4_9BACT) HSP 1 Score: 54.3 bits (129), Expect = 6.310e-7 Identity = 27/60 (45.00%), Postives = 39/60 (65.00%), Query Frame = 1
Query: 19 ELTMRILVAQVTRMGDMLQTTPMIRAIKHENPGASITVMVRDMGRIIAERNPDIDDVIVY 198
E RILV + +GD+L TTP +RA++ P A +T++V + R + ERNPD+DDV Y
Sbjct: 15 EKVRRILVVRKDNIGDVLCTTPALRALRRAFPEAYLTMLVSEHCRPVLERNPDLDDVFTY 74 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig111964.2506.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig111964.2506.1 >prot_M-pyrifera_M_contig111964.2506.1 ID=prot_M-pyrifera_M_contig111964.2506.1|Name=mRNA_M-pyrifera_M_contig111964.2506.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=57bp MRILVAQVTRMGDMLQTTPMIRAIKHENPGASITVMVRDMGRIIAERNPDback to top mRNA from alignment at M-pyrifera_M_contig111964:329..526+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig111964.2506.1 ID=mRNA_M-pyrifera_M_contig111964.2506.1|Name=mRNA_M-pyrifera_M_contig111964.2506.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=198bp|location=Sequence derived from alignment at M-pyrifera_M_contig111964:329..526+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig111964:329..526+ >mRNA_M-pyrifera_M_contig111964.2506.1 ID=mRNA_M-pyrifera_M_contig111964.2506.1|Name=mRNA_M-pyrifera_M_contig111964.2506.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=342bp|location=Sequence derived from alignment at M-pyrifera_M_contig111964:329..526+ (Macrocystis pyrifera P11B4 male)back to top |