mRNA_M-pyrifera_M_contig111962.2504.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig111962.2504.1 vs. uniprot
Match: UPI00118C4F13 (cadherin-like domain-containing protein n=1 Tax=Gimesia chilikensis TaxID=2605989 RepID=UPI00118C4F13) HSP 1 Score: 325 bits (833), Expect = 1.340e-99 Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 1
Query: 1 GSISSVTHSLNSDSSGSISVDGGLIQYTGTANITDRLNVTSRNFDFLGAGETVTLSDDGTADNGMSLIDSTLGTAINYVGTASGVTIKSNNGSGVDTINVEXXXXXXXSDLTITGDSNDLVTFQNNGTAMGASDLTVFAQTITVSSDVSSTDGLIDFTASRNIFLAAGRSLTTVDGAITLLANDGGSTTG 570
GSISSVTHSLNSDSSGSISVDGGLIQYTGTANITDRLNVTSRNFDFLGAGETVTLSDDGTADNGMSLIDSTLGTAINYVGTASGVTIKSNNGSGVDTINVEXXXXXXXSDLTITGDSNDLVTFQNNGTAMGASDLTVFAQTITVSSDVSSTDGLIDFTASRNIFLAAGRSLTTVDGAITLLANDGGSTTG
Sbjct: 3774 GSISSVTHSLNSDSSGSISVDGGLIQYTGTANITDRLNVTSRNFDFLGAGETVTLSDDGTADNGMSLIDSTLGTAINYVGTASGVTIKSNNGSGVDTINVEXXXXXXXSDLTITGDSNDLVTFQNNGTAMGASDLTVFAQTITVSSDVSSTDGLIDFTASRNIFLAAGRSLTTVDGAITLLANDGGSTTG 3963
BLAST of mRNA_M-pyrifera_M_contig111962.2504.1 vs. uniprot
Match: A0A517PT31_9PLAN (Calx-beta domain protein n=1 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A517PT31_9PLAN) HSP 1 Score: 325 bits (833), Expect = 1.340e-99 Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 1
Query: 1 GSISSVTHSLNSDSSGSISVDGGLIQYTGTANITDRLNVTSRNFDFLGAGETVTLSDDGTADNGMSLIDSTLGTAINYVGTASGVTIKSNNGSGVDTINVEXXXXXXXSDLTITGDSNDLVTFQNNGTAMGASDLTVFAQTITVSSDVSSTDGLIDFTASRNIFLAAGRSLTTVDGAITLLANDGGSTTG 570
GSISSVTHSLNSDSSGSISVDGGLIQYTGTANITDRLNVTSRNFDFLGAGETVTLSDDGTADNGMSLIDSTLGTAINYVGTASGVTIKSNNGSGVDTINVEXXXXXXXSDLTITGDSNDLVTFQNNGTAMGASDLTVFAQTITVSSDVSSTDGLIDFTASRNIFLAAGRSLTTVDGAITLLANDGGSTTG
Sbjct: 3773 GSISSVTHSLNSDSSGSISVDGGLIQYTGTANITDRLNVTSRNFDFLGAGETVTLSDDGTADNGMSLIDSTLGTAINYVGTASGVTIKSNNGSGVDTINVEXXXXXXXSDLTITGDSNDLVTFQNNGTAMGASDLTVFAQTITVSSDVSSTDGLIDFTASRNIFLAAGRSLTTVDGAITLLANDGGSTTG 3962
BLAST of mRNA_M-pyrifera_M_contig111962.2504.1 vs. uniprot
Match: A0A2E7KAE1_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Gimesia sp. TaxID=2024833 RepID=A0A2E7KAE1_9PLAN) HSP 1 Score: 319 bits (817), Expect = 1.870e-97 Identity = 186/190 (97.89%), Postives = 188/190 (98.95%), Query Frame = 1
Query: 1 GSISSVTHSLNSDSSGSISVDGGLIQYTGTANITDRLNVTSRNFDFLGAGETVTLSDDGTADNGMSLIDSTLGTAINYVGTASGVTIKSNNGSGVDTINVEXXXXXXXSDLTITGDSNDLVTFQNNGTAMGASDLTVFAQTITVSSDVSSTDGLIDFTASRNIFLAAGRSLTTVDGAITLLANDGGSTTG 570
G ISSVTHSLNSDSSGSISVDGGLIQYTGTANITDRLNVTSRNFDFLGAGETVTLSDDGTADNGMSLIDSTLGTAINYVGTASGVTIKSNNGSGVDTINVEXXXXXXXSDLTITGDSNDLVTFQNNGT MGA+DLTVFAQTITVSSDVSSTDG+IDFTASRNIFLAAGRSLTTVDGAITLLANDGGSTTG
Sbjct: 3774 GLISSVTHSLNSDSSGSISVDGGLIQYTGTANITDRLNVTSRNFDFLGAGETVTLSDDGTADNGMSLIDSTLGTAINYVGTASGVTIKSNNGSGVDTINVEXXXXXXXSDLTITGDSNDLVTFQNNGTTMGANDLTVFAQTITVSSDVSSTDGVIDFTASRNIFLAAGRSLTTVDGAITLLANDGGSTTG 3963
BLAST of mRNA_M-pyrifera_M_contig111962.2504.1 vs. uniprot
Match: A0A518IJC7_9PLAN (Calx-beta domain protein n=1 Tax=Gimesia fumaroli TaxID=2527976 RepID=A0A518IJC7_9PLAN) HSP 1 Score: 217 bits (553), Expect = 6.010e-62 Identity = 124/190 (65.26%), Postives = 151/190 (79.47%), Query Frame = 1
Query: 1 GSISSVTHSLNSDSSGSISVDGGLIQYTGTANITDRLNVTSRNFDFLGAGETVTLSDDGTADNGMSLIDSTLGTAINYVGTASGVTIKSNNGSGVDTINVEXXXXXXXSDLTITGDSNDLVTFQNNGTAMGASDLTVFAQTITVSSDVSSTDGLIDFTASRNIFLAAGRSLTTVDGAITLLANDGGSTTG 570
GS+++VTH+LNSD++G IS+DG LI YT T ++ D L+VT+R FDFLGA ET+T+SDDGTAD+G+SLIDSTLG A+ YVGT + VT+K+++GSG D IN+ DLTITGD++D VTFQ N TAMGASDLTV AQTITV S +SST G+I TASRNI L G SLTTVDG ITLLANDGG+T G
Sbjct: 2065 GSLTTVTHTLNSDTAGVISIDGQLINYTSTGSLADNLDVTNRVFDFLGATETITVSDDGTADDGLSLIDSTLGAAVAYVGTGA-VTVKTSSGSGTDVINIAGLDSLNAGDLTITGDTDDDVTFQTNLTAMGASDLTVAAQTITVDSGISSTSGVISLTASRNILLNTGSSLTTVDGGITLLANDGGATAG 2253
BLAST of mRNA_M-pyrifera_M_contig111962.2504.1 vs. uniprot
Match: A0A518FVZ5_9PLAN (Calx-beta domain protein n=1 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518FVZ5_9PLAN) HSP 1 Score: 216 bits (550), Expect = 1.520e-61 Identity = 123/190 (64.74%), Postives = 151/190 (79.47%), Query Frame = 1
Query: 1 GSISSVTHSLNSDSSGSISVDGGLIQYTGTANITDRLNVTSRNFDFLGAGETVTLSDDGTADNGMSLIDSTLGTAINYVGTASGVTIKSNNGSGVDTINVEXXXXXXXSDLTITGDSNDLVTFQNNGTAMGASDLTVFAQTITVSSDVSSTDGLIDFTASRNIFLAAGRSLTTVDGAITLLANDGGSTTG 570
GSI+++THSL+SD++GSI++D G+I Y+ ++TD L+VT+R FDFLGA ET++LSDDGTAD+GMSLIDSTLG A+ Y GT + VT+K+ +GSG DT+NVE SDLTITGDS+D VTFQ N TA+G DL+V AQTI V S +SSTDG I TASRNI L G SLTTVDG ITLLANDGG+TTG
Sbjct: 3143 GSINTLTHSLSSDTAGSIAIDDGVINYSNADSLTDHLDVTNRVFDFLGAAETISLSDDGTADDGMSLIDSTLGAAVTYAGTGT-VTVKTTSGSGSDTVNVEGLDSLNASDLTITGDSDDDVTFQTNTTALGTGDLSVTAQTINVDSGISSTDGAIALTASRNIVLNTGSSLTTVDGGITLLANDGGTTTG 3331
BLAST of mRNA_M-pyrifera_M_contig111962.2504.1 vs. uniprot
Match: A0A518FWM9_9PLAN (Calx-beta domain protein n=2 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518FWM9_9PLAN) HSP 1 Score: 213 bits (541), Expect = 2.460e-60 Identity = 121/190 (63.68%), Postives = 149/190 (78.42%), Query Frame = 1
Query: 1 GSISSVTHSLNSDSSGSISVDGGLIQYTGTANITDRLNVTSRNFDFLGAGETVTLSDDGTADNGMSLIDSTLGTAINYVGTASGVTIKSNNGSGVDTINVEXXXXXXXSDLTITGDSNDLVTFQNNGTAMGASDLTVFAQTITVSSDVSSTDGLIDFTASRNIFLAAGRSLTTVDGAITLLANDGGSTTG 570
GS+++VTHSLNSD++GSI +DGG+I Y+ ++TD L+VT+R FDFLGA ET++LSDDG+A +GMSLIDSTLG A+ YVGT + V +K+ +GSG DT+NVE SDLTITG S+D VTFQ N T MGA DL+V AQTITV S +SSTDG I TASRN+ L +G SLTTVDG ITLLAN GG+T G
Sbjct: 510 GSLTTVTHSLNSDTAGSIDIDGGVINYSNAGSLTDNLDVTNRVFDFLGAAETISLSDDGSAGDGMSLIDSTLGAAVTYVGTGA-VIVKTTSGSGSDTVNVEGLDSLNTSDLTITGGSDDNVTFQTNTTVMGAGDLSVTAQTITVDSGISSTDGAIALTASRNMLLNSGSSLTTVDGGITLLANSGGTTAG 698
BLAST of mRNA_M-pyrifera_M_contig111962.2504.1 vs. uniprot
Match: A0A517WUW9_9PLAN (Calx-beta domain protein n=1 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WUW9_9PLAN) HSP 1 Score: 207 bits (528), Expect = 1.380e-58 Identity = 119/190 (62.63%), Postives = 145/190 (76.32%), Query Frame = 1
Query: 1 GSISSVTHSLNSDSSGSISVDGGLIQYTGTANITDRLNVTSRNFDFLGAGETVTLSDDGTADNGMSLIDSTLGTAINYVGTASGVTIKSNNGSGVDTINVEXXXXXXXSDLTITGDSNDLVTFQNNGTAMGASDLTVFAQTITVSSDVSSTDGLIDFTASRNIFLAAGRSLTTVDGAITLLANDGGSTTG 570
GS+++VTH+LNSD+SGSIS+DG +I YT TA++TD L T+R FDF GA ETVTLSD GT+++G S IDSTLG A+ + T+S VT+ +N+G+G DTINV+ S LTITGD++D V FQ N T MGA+DLTV AQTITVSS +SST G + TASRNI L SLTTVDG ITLLANDGG TTG
Sbjct: 1139 GSLTTVTHTLNSDTSGSISIDGQIINYTNTASLTDDLATTNRIFDFAGAAETVTLSDHGTSNDGFSNIDSTLGAAVTFANTSSAVTVLTNSGNGADTINVQGLDSLNASSLTITGDADDDVNFQTNSTVMGANDLTVNAQTITVSSGISSTSGAVSLTASRNIALTTTSSLTTVDGGITLLANDGGLTTG 1328
BLAST of mRNA_M-pyrifera_M_contig111962.2504.1 vs. uniprot
Match: A0A518FT54_9PLAN (Calx-beta domain protein n=2 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518FT54_9PLAN) HSP 1 Score: 207 bits (526), Expect = 2.560e-58 Identity = 119/190 (62.63%), Postives = 146/190 (76.84%), Query Frame = 1
Query: 1 GSISSVTHSLNSDSSGSISVDGGLIQYTGTANITDRLNVTSRNFDFLGAGETVTLSDDGTADNGMSLIDSTLGTAINYVGTASGVTIKSNNGSGVDTINVEXXXXXXXSDLTITGDSNDLVTFQNNGTAMGASDLTVFAQTITVSSDVSSTDGLIDFTASRNIFLAAGRSLTTVDGAITLLANDGGSTTG 570
GS+S+VTH+LNSD++GSI +DGG I Y+ ++TD L+VT+R FDFLG ET++LSDDG+A +GMSLIDSTLG A+ YV T + V +K+ +GSG DT+NVE SDLTITG S+D VTFQ N T MGA DL+V AQTITV S +SSTDG I TASRN+ L +G SLTTVDG ITLLAN GG+T G
Sbjct: 510 GSLSTVTHTLNSDTAGSIDIDGGSINYSNAGSLTDNLDVTNRVFDFLGTAETISLSDDGSAGDGMSLIDSTLGAAVTYVRTGA-VIVKTTSGSGSDTVNVEGLDSLNTSDLTITGGSDDNVTFQTNTTVMGAGDLSVTAQTITVDSGISSTDGAIALTASRNMLLNSGSSLTTVDGGITLLANSGGTTAG 698
BLAST of mRNA_M-pyrifera_M_contig111962.2504.1 vs. uniprot
Match: A0A517RJG7_9PLAN (tRNA3(Ser)-specific nuclease WapA n=1 Tax=Gimesia alba TaxID=2527973 RepID=A0A517RJG7_9PLAN) HSP 1 Score: 201 bits (511), Expect = 2.670e-56 Identity = 113/190 (59.47%), Postives = 147/190 (77.37%), Query Frame = 1
Query: 1 GSISSVTHSLNSDSSGSISVDGGLIQYTGTANITDRLNVTSRNFDFLGAGETVTLSDDGTADNGMSLIDSTLGTAINYVGTASGVTIKSNNGSGVDTINVEXXXXXXXSDLTITGDSNDLVTFQNNGTAMGASDLTVFAQTITVSSDVSSTDGLIDFTASRNIFLAAGRSLTTVDGAITLLANDGGSTTG 570
G++S+VTH+LNSD++GSI +DG LI YT T+++ D L+V +R FDFLGA ET+TLSD GT+++G++ IDSTLG A+ +V TA+ V+I +N+GSG D INV +D+TITGD++D VTF + TAMGA+DLTV AQTI V S +SST G I TASRNI L G SLTT+DG ITLLAN+GG+TTG
Sbjct: 1146 GALSTVTHTLNSDTAGSILIDGQLINYTSTSSLADNLDVINRVFDFLGAAETITLSDSGTSNDGLTSIDSTLGAAVTFVNTATAVSISTNSGSGADAINVTGLDSLNVADVTITGDTDDDVTFLTDTTAMGANDLTVTAQTIAVDSGISSTTGAISLTASRNILLNTGSSLTTIDGGITLLANNGGTTTG 1335
BLAST of mRNA_M-pyrifera_M_contig111962.2504.1 vs. uniprot
Match: A0A518IE17_9PLAN (Calx-beta domain protein n=2 Tax=Gimesia fumaroli TaxID=2527976 RepID=A0A518IE17_9PLAN) HSP 1 Score: 194 bits (494), Expect = 5.090e-54 Identity = 111/190 (58.42%), Postives = 143/190 (75.26%), Query Frame = 1
Query: 1 GSISSVTHSLNSDSSGSISVDGGLIQYTGTANITDRLNVTSRNFDFLGAGETVTLSDDGTADNGMSLIDSTLGTAINYVGTASGVTIKSNNGSGVDTINVEXXXXXXXSDLTITGDSNDLVTFQNNGTAMGASDLTVFAQTITVSSDVSSTDGLIDFTASRNIFLAAGRSLTTVDGAITLLANDGGSTTG 570
GS+++V+H+LNS++SG+IS+DG LI Y T ++ D L+VT+R FDFLG ETVTLSD GT+ +G+S IDSTLG A+ +V T + V++ + +GSG D INV +D TITGDS+D VTF N TAMGA+DLTV AQTITVSS +SS+ G I T S+NI L +G SLTTVDG ITLLAN+GG+ TG
Sbjct: 733 GSLTTVSHTLNSETSGTISIDGQLINYISTGSLADNLDVTNRVFDFLGGAETVTLSDTGTSSDGLSSIDSTLGAAVTFVNTVAAVSLLTGSGSGADAINVIGLDSLNAADFTITGDSDDDVTFLTNATAMGANDLTVAAQTITVSSGISSSTGAISLTTSKNILLNSGSSLTTVDGGITLLANNGGTATG 922 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig111962.2504.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig111962.2504.1 >prot_M-pyrifera_M_contig111962.2504.1 ID=prot_M-pyrifera_M_contig111962.2504.1|Name=mRNA_M-pyrifera_M_contig111962.2504.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=190bp GSISSVTHSLNSDSSGSISVDGGLIQYTGTANITDRLNVTSRNFDFLGAGback to top mRNA from alignment at M-pyrifera_M_contig111962:18..587- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig111962.2504.1 ID=mRNA_M-pyrifera_M_contig111962.2504.1|Name=mRNA_M-pyrifera_M_contig111962.2504.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=570bp|location=Sequence derived from alignment at M-pyrifera_M_contig111962:18..587- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig111962:18..587- >mRNA_M-pyrifera_M_contig111962.2504.1 ID=mRNA_M-pyrifera_M_contig111962.2504.1|Name=mRNA_M-pyrifera_M_contig111962.2504.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1140bp|location=Sequence derived from alignment at M-pyrifera_M_contig111962:18..587- (Macrocystis pyrifera P11B4 male)back to top |