mRNA_M-pyrifera_M_contig111951.2501.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig111951.2501.1 vs. uniprot
Match: A0A0S4IPL7_BODSA (Uncharacterized protein n=1 Tax=Bodo saltans TaxID=75058 RepID=A0A0S4IPL7_BODSA) HSP 1 Score: 111 bits (278), Expect = 3.620e-27 Identity = 59/137 (43.07%), Postives = 79/137 (57.66%), Query Frame = 1
Query: 1 DESMNLVNEHDMGREIQLSFYAAPRGFDTPGKNCSREQPKSSPYYMFPWNPIGAGDIVGTTGVIEELVVGSENTSMYIRTRPKLWACDNVPCECTFERWIVLDGRGAIVTAQLNNFRTDNEPWAPQGFGQELPAVYT 411
D ++NL+N HD GRE+Q S+YA P + Q P+ PWNPI +GD G + + L + + TS+Y++ RP WA +NVPC CTFE +I LD GA V +L NFR D + + QELPAVYT
Sbjct: 50 DPTINLINCHDQGREVQQSYYAGPDPY-------RGAQWSGGPW---PWNPISSGDAFGHSSTV--LSLNNTGTSLYLKARPLQWALNNVPCNCTFETYITLDANGAFVRNRLINFREDETDYGARD--QELPAVYT 172
BLAST of mRNA_M-pyrifera_M_contig111951.2501.1 vs. uniprot
Match: A0A7X7TYF1_9BACT (Right-handed parallel beta-helix repeat-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7X7TYF1_9BACT) HSP 1 Score: 110 bits (275), Expect = 1.930e-25 Identity = 55/137 (40.15%), Postives = 79/137 (57.66%), Query Frame = 1
Query: 4 ESMNLVNEHDMGREIQLSFYAAPRGFDTPGKNCSREQPKSSPYYMFPWNPIGAGDIVGTTGVIEELVVGSENTSMYIRTRPKLWACDNVPCECTFERWIVLDGRGAIVTAQLNNFRTDNEPWAPQGFGQELPAVYTN 414
+ +N++N HD GR+IQ+SFY+ P F GK S+ + WNPI +GD G V+ E ++ S+Y++ P W DN P ECTFE WI L A+V +++N R+D ++ G GQELPA+YTN
Sbjct: 683 DKVNMINSHDWGRQIQMSFYSGPVPFAPNGKQPSKT------WAALGWNPIQSGDCAGNRSVVTEH--RNDGASLYVKCIPMQWPLDNEPGECTFESWIRLHANTAVVRCRIDNHRSDKTQYS--GRGQELPAIYTN 809
BLAST of mRNA_M-pyrifera_M_contig111951.2501.1 vs. uniprot
Match: A0A7W1VZN7_9BACT (Uncharacterized protein n=1 Tax=Chitinophagaceae bacterium TaxID=1869212 RepID=A0A7W1VZN7_9BACT) HSP 1 Score: 107 bits (267), Expect = 2.320e-24 Identity = 53/137 (38.69%), Postives = 79/137 (57.66%), Query Frame = 1
Query: 4 ESMNLVNEHDMGREIQLSFYAAPRGFDTPGKNCSREQPKSSPYYMFPWNPIGAGDIVGTTGVIEELVVGSENTSMYIRTRPKLWACDNVPCECTFERWIVLDGRGAIVTAQLNNFRTDNEPWAPQGFGQELPAVYTN 414
+S+N++N D GR++Q+SFY+ P F+ GK ++ + WNPI +GD+ G + E ++ +Y++ P W DNVP ECT+E WI LDG A V +++ N R D + +G QELPAVYTN
Sbjct: 756 DSINMINNWDWGRQVQMSFYSGPVPFEPDGKKANKA------WTFIGWNPIQSGDVAGNRSKVLEYK--NDGKEIYVKCIPMHWPLDNVPGECTYECWITLDGNAAKVRSRIVNNRPDRTQYPARG--QELPAVYTN 882
BLAST of mRNA_M-pyrifera_M_contig111951.2501.1 vs. uniprot
Match: A0A3D3UWX2_9BACT (Uncharacterized protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A3D3UWX2_9BACT) HSP 1 Score: 105 bits (262), Expect = 4.150e-24 Identity = 56/135 (41.48%), Postives = 76/135 (56.30%), Query Frame = 1
Query: 10 MNLVNEHDMGREIQLSFYAAPRGFDTPGKNCSREQPKSSPYYMFPWNPIGAGDIVGTTGVIEELVVGSENTSMYIRTRPKLWACDNVPCECTFERWIVLDGRGAIVTAQLNNFRTDNEPWAPQGFGQELPAVYTN 414
+N++N HD GR+IQ+SFY+ P F GK S+ + WNPI +GD G I E ++ S+Y++ P W DN P ECTFE WI L+ V +++ N RTD ++ G GQELPAVYTN
Sbjct: 31 INIINNHDWGRQIQMSFYSGPVPFTPGGKQPSKT------WAGLGWNPIQSGDYAGNRSRIVEY--RNDGKSIYVKCVPMQWPLDNEPGECTFESWIKLEENVVKVRSRIKNHRTDTTQYS--GRGQELPAVYTN 155
BLAST of mRNA_M-pyrifera_M_contig111951.2501.1 vs. uniprot
Match: A0A7M2X0F4_9BACT (Uncharacterized protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7M2X0F4_9BACT) HSP 1 Score: 104 bits (260), Expect = 9.630e-24 Identity = 56/138 (40.58%), Postives = 75/138 (54.35%), Query Frame = 1
Query: 1 DESMNLVNEHDMGREIQLSFYAAPRGFDTPGKNCSREQPKSSPYYMFPWNPIGAGDIVGTTGVIEELVVGSENTSMYIRTRPKLWACDNVPCECTFERWIVLDGRGAIVTAQLNNFRTDNEPWAPQGFGQELPAVYTN 414
DES NL+N +D+GR++Q+S+YA P + G Q + WNPI GD G I E ++ ++YI+ P WA D+VP ECTFE WI L+G V ++N R D W + QELPAVYTN
Sbjct: 56 DESKNLINSYDLGRQVQMSYYAGPVPYTVAG-----HQGPPDAWKHIGWNPIQVGDCYGNPAKIIEH--RNDGKTLYIKCLPMQWALDDVPGECTFECWIELEGPAVRVRGRVNMSRADKTQWPARN--QELPAVYTN 184
BLAST of mRNA_M-pyrifera_M_contig111951.2501.1 vs. uniprot
Match: A0A3E1EDZ2_9BACT (Uncharacterized protein n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A3E1EDZ2_9BACT) HSP 1 Score: 101 bits (251), Expect = 1.930e-22 Identity = 50/134 (37.31%), Postives = 77/134 (57.46%), Query Frame = 1
Query: 13 NLVNEHDMGREIQLSFYAAPRGFDTPGKNCSREQPKSSPYYMFPWNPIGAGDIVGTTGVIEELVVGSENTSMYIRTRPKLWACDNVPCECTFERWIVLDGRGAIVTAQLNNFRTDNEPWAPQGFGQELPAVYTN 414
NL+N HD GR++Q+SFY+ P F + G+ ++ + WNP+ GD T I L + S+++++RP W +N+P ECTF+ W+ LDG A+L N R+D++ + Q QELPAVY+N
Sbjct: 70 NLINSHDFGRQVQMSFYSGPVPFSSNGQQPAKH------WEHLGWNPVQTGDDFQNTSTI--LAHENSGRSLHVKSRPLQWPLNNIPGECTFDSWLTLDGCTVTARARLVNARSDHQQY--QARHQELPAVYSN 193
BLAST of mRNA_M-pyrifera_M_contig111951.2501.1 vs. uniprot
Match: A0A847JZI5_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Chthonomonadales bacterium TaxID=2282151 RepID=A0A847JZI5_9BACT) HSP 1 Score: 98.6 bits (244), Expect = 9.490e-22 Identity = 55/137 (40.15%), Postives = 75/137 (54.74%), Query Frame = 1
Query: 13 NLVNEHDMGREIQLSFYAAPRGFDTPGKNCSREQPKSSPYYMFPWNPIGAGDIVGT-TGVIEELVVGSENTSMYIRTRPKLWACDNVPCECTFERWIVL--DGRGAIVTAQLNNFRTDNEPWAPQGFGQELPAVYTN 414
N++N HD+GR+IQ S+Y+ P + GK KS + FPWNPI GD + V+E +V E +Y++T P LW +N P EC E WI L DG A+L N R+D + + QE+PAVYTN
Sbjct: 56 NIINSHDLGRQIQQSYYSGPPNYQREGKQ------KSPAWASFPWNPIQTGDAFHNGSKVLEHRIVNGE---LYVKTIPMLWPMNNDPGECVMETWIRLLPDGPKFQYRARLTNHRSDTTQY--RAHNQEVPAVYTN 181
BLAST of mRNA_M-pyrifera_M_contig111951.2501.1 vs. uniprot
Match: A0A522UJ36_9BACT (Uncharacterized protein n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A522UJ36_9BACT) HSP 1 Score: 98.2 bits (243), Expect = 2.400e-21 Identity = 53/133 (39.85%), Postives = 73/133 (54.89%), Query Frame = 1
Query: 13 NLVNEHDMGREIQLSFYAAPRGFDTPGKNCSREQPKSSPYYMFPWNPIGAGDIVGTTGVIEELVVGSENTSMYIRTRPKLWACDNVPCECTFERWIVLDGRGAIVTAQLNNFRTDNEPWAPQGFGQELPAVYT 411
NL+N HD GR++QLSFY+ P F PG S+ + WNPI AGD G + E ++ T++ ++ P +W +NVP ECTFE L G+ V +L+N R D ++ G QELPAVYT
Sbjct: 55 NLINSHDWGRQVQLSFYSGPNPFQPPGSTLSKA------WAGLGWNPIQAGDCYGHGSKVLEH--HNDGTTLRVKCVPMIWPLNNVPAECTFETVYRLAGKTVEVDCRLDNTRQDQTQYS--GRNQELPAVYT 177
BLAST of mRNA_M-pyrifera_M_contig111951.2501.1 vs. uniprot
Match: A0A1M3HKK9_9SPHI (Uncharacterized protein n=1 Tax=Sphingobacteriales bacterium 50-39 TaxID=1895841 RepID=A0A1M3HKK9_9SPHI) HSP 1 Score: 96.7 bits (239), Expect = 1.360e-20 Identity = 51/135 (37.78%), Postives = 77/135 (57.04%), Query Frame = 1
Query: 13 NLVNEHDMGREIQLSFYAAPRGFDTPGKNCSREQPKSSPYYM-FPWNPIGAGDIVGTTGVIEELVVGSENTSMYIRTRPKLWACDNVPCECTFERWIVLDGRGAIVTAQLNNFRTDNEPWAPQGFGQELPAVYTN 414
N++N +D+GR++Q+SFY+ P ++ GK K++P ++ WNPI +GD+ G I L S +Y++ P W NVP ECT+E WI L+G V +++ N R D + + QELPAVYTN
Sbjct: 31 NMINNYDLGRQVQMSFYSGPVPYEPDGK-------KANPAWVSIGWNPIQSGDVAGNHSRI--LAFTSGRNEIYVKCIPMHWPLTNVPGECTYECWIRLEGNTVKVRSRIVNHRPDTTQFPARN--QELPAVYTN 154
BLAST of mRNA_M-pyrifera_M_contig111951.2501.1 vs. uniprot
Match: A0A353P567_9BACT (LamGL domain-containing protein n=2 Tax=Planctomycetes TaxID=203682 RepID=A0A353P567_9BACT) HSP 1 Score: 95.9 bits (237), Expect = 2.420e-20 Identity = 54/134 (40.30%), Postives = 75/134 (55.97%), Query Frame = 1
Query: 13 NLVNEHDMGREIQLSFYAAPRGFDTPGKNCSREQPKSSPYYMFPWNPIGAGDIVGTTGVIEELVVGSENTSMYIRTRPKLWACDNVPCECTFERWIVLDGRGAIVTAQLNNFRTDNEPWAPQGFGQELPAVYTN 414
++VN +D+GREIQ S+Y+ P F+ G N S + WNP+ AGD G+ + E L ++ S+Y++ PK W NV EC E WI L+G AIV +L N R+D + + QELPAVYTN
Sbjct: 52 DIVNNYDLGREIQQSYYSGPIPFE--GANWSGSD--------WSWNPVAAGDKCGS--ISEVLEWSNDGGSIYVKRIPKQWGLCNVASECIMEEWIRLEGNVAIVRCKLTNNRSDTTFYP--AYNQELPAVYTN 171 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig111951.2501.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig111951.2501.1 >prot_M-pyrifera_M_contig111951.2501.1 ID=prot_M-pyrifera_M_contig111951.2501.1|Name=mRNA_M-pyrifera_M_contig111951.2501.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=135bp MNLVNEHDMGREIQLSFYAAPRGFDTPGKNCSREQPKSSPYYMFPWNPIGback to top mRNA from alignment at M-pyrifera_M_contig111951:6..419+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig111951.2501.1 ID=mRNA_M-pyrifera_M_contig111951.2501.1|Name=mRNA_M-pyrifera_M_contig111951.2501.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=414bp|location=Sequence derived from alignment at M-pyrifera_M_contig111951:6..419+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig111951:6..419+ >mRNA_M-pyrifera_M_contig111951.2501.1 ID=mRNA_M-pyrifera_M_contig111951.2501.1|Name=mRNA_M-pyrifera_M_contig111951.2501.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=810bp|location=Sequence derived from alignment at M-pyrifera_M_contig111951:6..419+ (Macrocystis pyrifera P11B4 male)back to top |