mRNA_M-pyrifera_M_contig111939.2496.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig111939.2496.1 vs. uniprot
Match: A0A6N7FNC3_9ACTN (Flagellar hook protein FlgE n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6N7FNC3_9ACTN) HSP 1 Score: 219 bits (557), Expect = 7.040e-67 Identity = 119/185 (64.32%), Postives = 149/185 (80.54%), Query Frame = 1
Query: 4 ITDSVLEFDANGDISVPADLDMNVAAGQIPGLGAFTISLSDSGG--RVSQYGELASLSVTAQDGASAGSLQAVTVSQEGVLVGSYSNGRNRAIAQFSVSTFANSGGLEKVGDSNFRTTVNSGVAQLSTAGTGGRGLVSSGTLEMSNVDLASEFTNLIVAQRGFQANSRVVTASDELLSDIVNLKR 552
+TDSVL FDANG+++ PA M +AAGQ+PGLGA +SL +G R++Q G +++ V QDG++AGSLQ+ VSQ+G LVGSYSNGR R I Q ++++FAN GLEK+G S++R T NSG+A L AG GGRGL+S+GTLEMSNVDLA EFTNLIVAQRGFQANSRV+TA+DELLSD+VNLKR
Sbjct: 229 LTDSVLTFDANGELTSPAAFQMGIAAGQVPGLGAIAVSLGQAGATERITQLGGKSTIKVLDQDGSAAGSLQSFNVSQDGQLVGSYSNGRTRVIGQIALASFANPEGLEKIGSSSYRATPNSGLAALGAAGAGGRGLLSTGTLEMSNVDLAQEFTNLIVAQRGFQANSRVITAADELLSDVVNLKR 413
BLAST of mRNA_M-pyrifera_M_contig111939.2496.1 vs. uniprot
Match: A0A5Q2RCS0_9ACTN (Flagellar hook protein FlgE n=1 Tax=Actinomarinicola tropica TaxID=2789776 RepID=A0A5Q2RCS0_9ACTN) HSP 1 Score: 198 bits (503), Expect = 8.780e-59 Identity = 115/183 (62.84%), Postives = 143/183 (78.14%), Query Frame = 1
Query: 10 DSVLEFDANGDISVPADLDMNVAAGQIPGLGAFTISLSDSGG--RVSQYGELASLSVTAQDGASAGSLQAVTVSQEGVLVGSYSNGRNRAIAQFSVSTFANSGGLEKVGDSNFRTTVNSGVAQLSTAGTGGRGLVSSGTLEMSNVDLASEFTNLIVAQRGFQANSRVVTASDELLSDIVNLKR 552
DS + FD G+I A + P G + L D GG R++QYGEL++++V +QDG++AGSLQ+ +VSQEG++VGSYSNGR RAI Q ++++FAN GLEKVG SN+R+T+NSG+AQL TAG GGRGL+SSGTLEMSNVDLA EFTNLIVAQRGFQANSRVVT SDELL ++VNLKR
Sbjct: 233 DSTIVFDGAGEIDAGASTINPLNTIPAPA-GTIDLFLGDPGGANRLTQYGELSTVAVLSQDGSAAGSLQSFSVSQEGLVVGSYSNGRTRAIGQIALASFANPEGLEKVGGSNYRSTMNSGLAQLGTAGAGGRGLLSSGTLEMSNVDLAQEFTNLIVAQRGFQANSRVVTTSDELLQEVVNLKR 414
BLAST of mRNA_M-pyrifera_M_contig111939.2496.1 vs. uniprot
Match: A0A7K1BC31_9ACTN (Flagellar hook protein FlgE n=2 Tax=root TaxID=1 RepID=A0A7K1BC31_9ACTN) HSP 1 Score: 174 bits (441), Expect = 1.500e-49 Identity = 99/186 (53.23%), Postives = 136/186 (73.12%), Query Frame = 1
Query: 4 ITDSVLEFDANGDISVPADLDMNVAAGQIPGLG---AFTISLSDSGGRVSQYGELASLSVTAQDGASAGSLQAVTVSQEGVLVGSYSNGRNRAIAQFSVSTFANSGGLEKVGDSNFRTTVNSGVAQLSTAGTGGRGLVSSGTLEMSNVDLASEFTNLIVAQRGFQANSRVVTASDELLSDIVNLKR 552
ITD+VL F+ G++ PAD +MNVA G IPG F + + S GRV+Q+ ++++ QDG+++G+LQA +V Q+GV+ GSYSNG +AI Q +++ F N GLE+V + +R T NSG+AQ+ G GGRGL+S+GTLEMSNVDLA EFT LIVAQRGFQ N+RV+T SDE+L ++VNL+R
Sbjct: 230 ITDNVLTFNGAGELIGPADRNMNVAGGVIPGYPNPIVFALGAAGSQGRVTQFAGGTTVAIVQQDGSASGTLQAFSVGQDGVITGSYSNGLTQAIGQLALAVFNNPQGLERVAGA-WRATANSGLAQVGAPGAGGRGLLSAGTLEMSNVDLAEEFTRLIVAQRGFQGNARVITTSDEVLQEVVNLRR 414
BLAST of mRNA_M-pyrifera_M_contig111939.2496.1 vs. uniprot
Match: UPI001D12AE9C (flagellar basal-body rod protein FlgF n=1 Tax=Aquihabitans sp. Kera 3 TaxID=2884263 RepID=UPI001D12AE9C) HSP 1 Score: 167 bits (424), Expect = 6.010e-47 Identity = 98/188 (52.13%), Postives = 135/188 (71.81%), Query Frame = 1
Query: 4 ITDSVLEFDANGDISVPADLDMNVAAGQIPGLGA---FTISLSDSGG--RVSQYGELASLSVTAQDGASAGSLQAVTVSQEGVLVGSYSNGRNRAIAQFSVSTFANSGGLEKVGDSNFRTTVNSGVAQLSTAGTGGRGLVSSGTLEMSNVDLASEFTNLIVAQRGFQANSRVVTASDELLSDIVNLKR 552
+T L FDA+G+++ + + + G IPG GA ++SL + RV+Q+G L++ S QDG++AGSLQ+ ++ Q+G++ GSYSNG R++ Q ++++F N GLEK G S FR T SG + AG GGRGL+SSGTLEMSNVDL++EFTNLI+AQRGFQANSRVVT SDE+L ++VNLKR
Sbjct: 238 VTGGPLTFDADGELT--SGYTLTIPGGAIPGFGAGDDISVSLGAAAAPTRVTQFGSLSTASALDQDGSAAGSLQSFSIGQDGLVTGSYSNGLTRSLGQLALASFNNPEGLEKRGGSAFRATPASGAINIGQAGQGGRGLLSSGTLEMSNVDLSTEFTNLILAQRGFQANSRVVTTSDEMLQEVVNLKR 423
BLAST of mRNA_M-pyrifera_M_contig111939.2496.1 vs. uniprot
Match: A0A8A4ZH69_9MICO (Flagellar hook protein FlgE n=1 Tax=Pengzhenrongella sicca TaxID=2819238 RepID=A0A8A4ZH69_9MICO) HSP 1 Score: 161 bits (408), Expect = 7.280e-45 Identity = 92/178 (51.69%), Postives = 124/178 (69.66%), Query Frame = 1
Query: 19 LEFDANGDISVPADLDMNVAAGQIPGLGAFTISLSDSGGRVSQYGELASLSVTAQDGASAGSLQAVTVSQEGVLVGSYSNGRNRAIAQFSVSTFANSGGLEKVGDSNFRTTVNSGVAQLSTAGTGGRGLVSSGTLEMSNVDLASEFTNLIVAQRGFQANSRVVTASDELLSDIVNLKR 552
L FDA G ++ P L LGA + + G ++ + L++L+ QDG AG+LQ+ +S +G L+GSYSNG +AI Q +++TF N GLEK GDS + T+VNSG A++ TAGTGGRG +++G LEMSNVDL+SEFTNLI+AQRGFQAN+RV+T SD LL ++VNLKR
Sbjct: 229 LAFDAAGKLTSPTSL----------ALGAVAVDI----GAITGFASLSTLAAGTQDGQEAGTLQSFALSSDGTLMGSYSNGLTQAIGQLALATFNNPAGLEKTGDSMYTTSVNSGAAEIGTAGTGGRGSLANGALEMSNVDLSSEFTNLIIAQRGFQANARVITTSDSLLEELVNLKR 392
BLAST of mRNA_M-pyrifera_M_contig111939.2496.1 vs. uniprot
Match: UPI00045E8287 (flagellar hook protein FlgE n=1 Tax=Cellulomonas sp. KRMCY2 TaxID=1304865 RepID=UPI00045E8287) HSP 1 Score: 160 bits (404), Expect = 3.300e-44 Identity = 95/180 (52.78%), Postives = 126/180 (70.00%), Query Frame = 1
Query: 19 LEFDANGDISV--PADLDMNVAAGQIPGLGAFTISLSDSGGRVSQYGELASLSVTAQDGASAGSLQAVTVSQEGVLVGSYSNGRNRAIAQFSVSTFANSGGLEKVGDSNFRTTVNSGVAQLSTAGTGGRGLVSSGTLEMSNVDLASEFTNLIVAQRGFQANSRVVTASDELLSDIVNLKR 552
L DANG ++V P N A G + A T+ L+D V+ Y L ++ T +G +AG+LQ+ T++ +G L GS+SNG +A+ + S++TF N GLEK G S +RTTVNSG AQ+ AGTGGRG ++ G LEMSNVDL++EFTNLI+AQRGFQANSRV+T SDELL ++VNLKR
Sbjct: 228 LAVDANGAVTVTDPVAFPANAATG----MSALTVDLAD----VTGYAGLTTVEATLPNGRAAGTLQSFTINADGTLQGSFSNGLKQALGRVSLATFTNPAGLEKAGGSLYRTTVNSGDAQVGAAGTGGRGDLTGGALEMSNVDLSAEFTNLIIAQRGFQANSRVITTSDELLQELVNLKR 399
BLAST of mRNA_M-pyrifera_M_contig111939.2496.1 vs. uniprot
Match: A0A7Y0QHE1_CELFI (Flagellar basal body protein n=1 Tax=Cellulomonas fimi TaxID=1708 RepID=A0A7Y0QHE1_CELFI) HSP 1 Score: 159 bits (403), Expect = 4.090e-44 Identity = 97/179 (54.19%), Postives = 126/179 (70.39%), Query Frame = 1
Query: 19 LEFDAN-GDISVPADLDMNVAAGQIPGLGAFTISLSDSGGRVSQYGELASLSVTAQDGASAGSLQAVTVSQEGVLVGSYSNGRNRAIAQFSVSTFANSGGLEKVGDSNFRTTVNSGVAQLSTAGTGGRGLVSSGTLEMSNVDLASEFTNLIVAQRGFQANSRVVTASDELLSDIVNLKR 552
+ FDA G ++ PA L +GA + LS G + L + +QDG AG+LQ+ +++ +G L+GS+SNG +AI Q +++TFANS GLEK G+S +RTTVNSG AQ+ TAGTGGRG +S G LEMSNVDL+SEFTNLI+AQRGFQANSRV+T SDELL ++VNLKR
Sbjct: 229 MTFDATTGALTSPASLT----------IGAVAVDLSTMTG----FAGLETAKAASQDGREAGNLQSFSLNADGTLMGSFSNGLKQAIGQIALATFANSTGLEKSGNSLYRTTVNSGAAQVGTAGTGGRGGLSGGALEMSNVDLSSEFTNLIIAQRGFQANSRVITTSDELLQELVNLKR 393
BLAST of mRNA_M-pyrifera_M_contig111939.2496.1 vs. uniprot
Match: A0A1H3MX82_9ACTN (Flagellar hook protein FlgE n=1 Tax=Micromonospora pattaloongensis TaxID=405436 RepID=A0A1H3MX82_9ACTN) HSP 1 Score: 157 bits (396), Expect = 5.030e-43 Identity = 85/138 (61.59%), Postives = 108/138 (78.26%), Query Frame = 1
Query: 139 VSQYGELASLSVTAQDGASAGSLQAVTVSQEGVLVGSYSNGRNRAIAQFSVSTFANSGGLEKVGDSNFRTTVNSGVAQLSTAGTGGRGLVSSGTLEMSNVDLASEFTNLIVAQRGFQANSRVVTASDELLSDIVNLKR 552
VS Y +L+VT Q+G+ AG+LQA T++ +G LVG +SNG+ + + Q +++ F N GLEKVGDS +RT+VNSGVAQ+ AGTGGRG + LEMSNVDLA EFTNL++AQRGFQANSRV+T SDELL D+VNLKR
Sbjct: 262 VSSYAGEKTLTVTGQNGSQAGTLQAYTIAPDGALVGVFSNGQKQPLGQVALANFNNPPGLEKVGDSMYRTSVNSGVAQVGVAGTGGRGALQGMALEMSNVDLAQEFTNLVIAQRGFQANSRVITTSDELLQDLVNLKR 399
BLAST of mRNA_M-pyrifera_M_contig111939.2496.1 vs. uniprot
Match: A0A7J9UYK9_9MICO (Flagellar basal body protein n=1 Tax=Georgenia ruanii TaxID=348442 RepID=A0A7J9UYK9_9MICO) HSP 1 Score: 156 bits (395), Expect = 8.830e-43 Identity = 87/152 (57.24%), Postives = 115/152 (75.66%), Query Frame = 1
Query: 97 LGAFTISLSDSGGRVSQYGELASLSVTAQDGASAGSLQAVTVSQEGVLVGSYSNGRNRAIAQFSVSTFANSGGLEKVGDSNFRTTVNSGVAQLSTAGTGGRGLVSSGTLEMSNVDLASEFTNLIVAQRGFQANSRVVTASDELLSDIVNLKR 552
+G TI LS RVS +G L++L +QDG AG+LQ+ +++ +G L+GS+SNG + + +++ FAN+ GLEK G + FR+TVNSG AQ+ TAGTGGRG +SS LEMSNVDL+ EFTNLI+AQRGFQA SRV+T SDELL ++VNLKR
Sbjct: 263 VGGVTIDLS----RVSGFGNLSTLEAKSQDGMGAGTLQSFSMNADGTLIGSFSNGFKEPVGRIALANFANAAGLEKAGGTAFRSTVNSGEAQVGTAGTGGRGSLSSRALEMSNVDLSQEFTNLIIAQRGFQAGSRVITTSDELLQELVNLKR 410
BLAST of mRNA_M-pyrifera_M_contig111939.2496.1 vs. uniprot
Match: A0A4Q5MWQ6_9CELL (Flagellar hook protein FlgE n=2 Tax=Actinomycetia TaxID=1760 RepID=A0A4Q5MWQ6_9CELL) HSP 1 Score: 155 bits (393), Expect = 1.450e-42 Identity = 82/135 (60.74%), Postives = 110/135 (81.48%), Query Frame = 1
Query: 148 YGELASLSVTAQDGASAGSLQAVTVSQEGVLVGSYSNGRNRAIAQFSVSTFANSGGLEKVGDSNFRTTVNSGVAQLSTAGTGGRGLVSSGTLEMSNVDLASEFTNLIVAQRGFQANSRVVTASDELLSDIVNLKR 552
+ L++++ AQDG AG+LQ+ ++S +G L+GS+SNG +AI Q S++TF N GLEK G S +RTTV+SG+AQ+ AGTGGRG ++ G+LEMSNVDL++EFTNLI+AQRGFQANSRV+T SDELL ++VNLKR
Sbjct: 267 FAGLSTVAAVAQDGQGAGNLQSFSLSPDGTLLGSFSNGLKQAIGQLSMATFTNPTGLEKAGGSMYRTTVSSGIAQVGVAGTGGRGKLAGGSLEMSNVDLSAEFTNLIIAQRGFQANSRVITTSDELLQELVNLKR 401 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig111939.2496.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig111939.2496.1 >prot_M-pyrifera_M_contig111939.2496.1 ID=prot_M-pyrifera_M_contig111939.2496.1|Name=mRNA_M-pyrifera_M_contig111939.2496.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=185bp TITDSVLEFDANGDISVPADLDMNVAAGQIPGLGAFTISLSDSGGRVSQYback to top mRNA from alignment at M-pyrifera_M_contig111939:33..587- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig111939.2496.1 ID=mRNA_M-pyrifera_M_contig111939.2496.1|Name=mRNA_M-pyrifera_M_contig111939.2496.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=555bp|location=Sequence derived from alignment at M-pyrifera_M_contig111939:33..587- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig111939:33..587- >mRNA_M-pyrifera_M_contig111939.2496.1 ID=mRNA_M-pyrifera_M_contig111939.2496.1|Name=mRNA_M-pyrifera_M_contig111939.2496.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1110bp|location=Sequence derived from alignment at M-pyrifera_M_contig111939:33..587- (Macrocystis pyrifera P11B4 male)back to top |