mRNA_M-pyrifera_M_contig111922.2492.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig111922.2492.1 vs. uniprot
Match: A0A2D4XJ06_9FLAO (Uncharacterized protein n=3 Tax=Aequorivita TaxID=153265 RepID=A0A2D4XJ06_9FLAO) HSP 1 Score: 139 bits (349), Expect = 2.150e-35 Identity = 77/139 (55.40%), Postives = 98/139 (70.50%), Query Frame = 1
Query: 1 ASLTGPTLSGRPSGTCFNDGESVS-FSVSDSAGQTASCSWTYDLFDNESPSIDGTLSSTPCPGNIVRSTDPSACSAVVVYTTPVGTDNCPGVTTSRTAGLASGSTFPTGSTTQTFVATDAQGSTSSCSFSVTVNDVEAP 414
A+LT +G PSG+ F G + + F V+DS+G TA+CS+ + D E+P+I CPGNI++S DP C AV+ YT PVGTDNCPG TT +TAGLASG TFP G+TT TFV TDA G+T++CSF VT+ND EAP
Sbjct: 1075 AALTPTQTAGLPSGSTFPIGTTTNTFIVTDSSGNTATCSFDVTVNDTEAPAI-------TCPGNIIQSNDPGVCGAVITYTAPVGTDNCPGSTTVQTAGLASGETFPIGTTTNTFVVTDASGNTATCSFDVTINDNEAP 1206
BLAST of mRNA_M-pyrifera_M_contig111922.2492.1 vs. uniprot
Match: UPI001F45A165 (HYR domain-containing protein n=2 Tax=Flavobacteriaceae TaxID=49546 RepID=UPI001F45A165) HSP 1 Score: 132 bits (331), Expect = 5.250e-33 Identity = 76/139 (54.68%), Postives = 94/139 (67.63%), Query Frame = 1
Query: 1 ASLTGPTLSGRPSGTCFNDGESVS-FSVSDSAGQTASCSWTYDLFDNESPSIDGTLSSTPCPGNIVRSTDPSACSAVVVYTTPVGTDNCPGVTTSRTAGLASGSTFPTGSTTQTFVATDAQGSTSSCSFSVTVNDVEAP 414
A+LT +G PSG+ F G + + F V+DS+G TA+CS+ + D E+P I CPGNI + DP C AV+ Y TPVGTDNC G TT +TAGLASGSTFP G+TT TFV TDA G+T+ CSF VT+ND EAP
Sbjct: 14 AALTPTQTAGLPSGSTFPIGTTTNTFVVTDSSGNTATCSFDVIVNDTEAPEI-------TCPGNITQGNDPGICGAVITYITPVGTDNCSGSTTIQTAGLASGSTFPVGTTTNTFVVTDASGNTAICSFDVTINDNEAP 145
BLAST of mRNA_M-pyrifera_M_contig111922.2492.1 vs. uniprot
Match: UPI00147980F2 (HYR domain-containing protein n=1 Tax=Aequorivita antarctica TaxID=153266 RepID=UPI00147980F2) HSP 1 Score: 128 bits (322), Expect = 4.970e-32 Identity = 72/130 (55.38%), Postives = 89/130 (68.46%), Query Frame = 1
Query: 28 GRPSGTCFNDGESVS-FSVSDSAGQTASCSWTYDLFDNESPSIDGTLSSTPCPGNIVRSTDPSACSAVVVYTTPVGTDNCPGVTTSRTAGLASGSTFPTGSTTQTFVATDAQGSTSSCSFSVTVNDVEAP 414
G PSG+ F G + + F V+D++G TA+CS+ + D E P I CPGNI + D C AV+ YT PVGTDNCPG TT++TAGLASGSTFP G+TT TFV TDA G+T+SCSF V +ND EAP
Sbjct: 336 GLPSGSTFPVGTTTNTFVVTDASGNTATCSFDVTVNDTEVPEI-------TCPGNITQDNDAGICGAVITYTAPVGTDNCPGSTTAQTAGLASGSTFPVGTTTNTFVTTDASGNTASCSFDVIINDNEAP 458
BLAST of mRNA_M-pyrifera_M_contig111922.2492.1 vs. uniprot
Match: UPI000ABE0A95 (M36 family metallopeptidase n=1 Tax=Aequorivita soesokkakensis TaxID=1385699 RepID=UPI000ABE0A95) HSP 1 Score: 128 bits (322), Expect = 9.410e-32 Identity = 72/130 (55.38%), Postives = 89/130 (68.46%), Query Frame = 1
Query: 28 GRPSGTCFNDGESVS-FSVSDSAGQTASCSWTYDLFDNESPSIDGTLSSTPCPGNIVRSTDPSACSAVVVYTTPVGTDNCPGVTTSRTAGLASGSTFPTGSTTQTFVATDAQGSTSSCSFSVTVNDVEAP 414
G PSG+ F G + + F V+D AG TA+CS+ + D E+P+I CPGNI + DP C AV+ YT PVGTDNC G TT +TAGLASGSTFP G+TT TFV TDA G+T++CSF V +ND EAP
Sbjct: 1612 GLPSGSTFPVGTTTNTFVVTDGAGNTATCSFDVTVNDTEAPAI-------TCPGNITQDNDPGICGAVITYTAPVGTDNCSGSTTVQTAGLASGSTFPVGTTTNTFVVTDASGNTATCSFDVIINDNEAP 1734
BLAST of mRNA_M-pyrifera_M_contig111922.2492.1 vs. uniprot
Match: A0A2S0HUM6_9FLAO (Uncharacterized protein n=1 Tax=Pukyongia salina TaxID=2094025 RepID=A0A2S0HUM6_9FLAO) HSP 1 Score: 124 bits (312), Expect = 2.090e-30 Identity = 73/139 (52.52%), Postives = 90/139 (64.75%), Query Frame = 1
Query: 1 ASLTGPTLSGRPSGTCFNDGES-VSFSVSDSAGQTASCSWTYDLFDNESPSIDGTLSSTPCPGNIVRSTDPSACSAVVVYTTPVGTDNCPGVTTSRTAGLASGSTFPTGSTTQTFVATDAQGSTSSCSFSVTVNDVEAP 414
A +T SG SG+ F G + V+F+ +D+AG TA CS+ + D E P I CP +I+ S DP C AVV YT PVGTDNCPG TT +TAGL SGS+FP G+TT TFV TDA G+T++CSF V VND E P
Sbjct: 1481 AGVTVTQTSGLASGSTFPVGTTAVTFTATDAAGNTAMCSFNVTVNDTEDPVI-------TCPTDIIVSNDPGVCEAVVTYTAPVGTDNCPGATTMQTAGLPSGSSFPVGTTTNTFVVTDASGNTATCSFDVIVNDTEDP 1612
BLAST of mRNA_M-pyrifera_M_contig111922.2492.1 vs. uniprot
Match: A0A5C6YZS6_9FLAO (HYR domain-containing protein n=2 Tax=Aequorivita antarctica TaxID=153266 RepID=A0A5C6YZS6_9FLAO) HSP 1 Score: 124 bits (311), Expect = 2.800e-30 Identity = 70/128 (54.69%), Postives = 87/128 (67.97%), Query Frame = 1
Query: 34 PSGTCFNDGESVS-FSVSDSAGQTASCSWTYDLFDNESPSIDGTLSSTPCPGNIVRSTDPSACSAVVVYTTPVGTDNCPGVTTSRTAGLASGSTFPTGSTTQTFVATDAQGSTSSCSFSVTVNDVEAP 414
PSG+ F G + + F V+DSAG TA+CS+ + D E+P I CPGNI + D C AV+ YT PVGTDNC G TT++TAGLASG TFP G+TT TFV TDA G++S+CSF V +ND EAP
Sbjct: 770 PSGSTFPVGTTTNTFVVTDSAGNTATCSFDVTVNDTEAPEI-------TCPGNITQDNDLGICGAVITYTAPVGTDNCSGATTTQTAGLASGETFPVGTTTNTFVVTDASGNSSTCSFDVIINDNEAP 890
BLAST of mRNA_M-pyrifera_M_contig111922.2492.1 vs. uniprot
Match: UPI00041FB8BB (HYR domain-containing protein n=1 Tax=Gillisia sp. JM1 TaxID=1283286 RepID=UPI00041FB8BB) HSP 1 Score: 123 bits (308), Expect = 7.010e-30 Identity = 70/130 (53.85%), Postives = 89/130 (68.46%), Query Frame = 1
Query: 28 GRPSGTCFNDGESVS-FSVSDSAGQTASCSWTYDLFDNESPSIDGTLSSTPCPGNIVRSTDPSACSAVVVYTTPVGTDNCPGVTTSRTAGLASGSTFPTGSTTQTFVATDAQGSTSSCSFSVTVNDVEAP 414
G SG+ F G + + F+V+D++G SCS+T + D E+P+I CP I +S D C AVV YT PVGTDNC G TT++TAGLASGSTFP G+TT TF TDA G+++SCSF+VTVND EAP
Sbjct: 443 GLASGSTFPVGTTTNTFTVTDASGNATSCSFTVTVNDTEAPAI-------TCPAPITQSNDAGVCGAVVTYTAPVGTDNCSGSTTTQTAGLASGSTFPVGTTTNTFTVTDASGNSTSCSFTVTVNDTEAP 565
BLAST of mRNA_M-pyrifera_M_contig111922.2492.1 vs. uniprot
Match: A0A7G8PSI1_9FLAO (HYR domain-containing protein n=2 Tax=Constantimarinum furrinae TaxID=2562285 RepID=A0A7G8PSI1_9FLAO) HSP 1 Score: 123 bits (308), Expect = 7.250e-30 Identity = 71/130 (54.62%), Postives = 87/130 (66.92%), Query Frame = 1
Query: 28 GRPSGTCFNDGESVS-FSVSDSAGQTASCSWTYDLFDNESPSIDGTLSSTPCPGNIVRSTDPSACSAVVVYTTPVGTDNCPGVTTSRTAGLASGSTFPTGSTTQTFVATDAQGSTSSCSFSVTVNDVEAP 414
G PSG+ F G + + F V+D++G TA+CS+ + D E P I CPGNI + DP CSAVV Y TPVGTDNC G TT +TAGL SGS FP G+TT TFV TD+ G+T++CSF VTVND E P
Sbjct: 1745 GLPSGSTFPVGTTTNTFEVTDASGNTATCSFDVIVNDTEDPVI-------TCPGNITVNNDPGLCSAVVTYATPVGTDNCSGSTTMQTAGLPSGSAFPVGTTTNTFVVTDSSGNTATCSFDVTVNDNEPP 1867
BLAST of mRNA_M-pyrifera_M_contig111922.2492.1 vs. uniprot
Match: A0A2V8LPI6_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8LPI6_9BACT) HSP 1 Score: 122 bits (306), Expect = 1.280e-29 Identity = 65/116 (56.03%), Postives = 82/116 (70.69%), Query Frame = 1
Query: 67 VSFSVSDSAGQTASCSWTYDLFDNESPSIDGTLSSTPCPGNIVRSTDPSACSAVVVYTTPVGTDNCPGVTTSRTAGLASGSTFPTGSTTQTFVATDAQGSTSSCSFSVTVNDVEAP 414
++++ +DSAG +SC+ T + D E+P+I CP NI R DP C AVVVY TPVG+DNCPG TT +TAGL SGSTFP G+TT TF TD+ G+ +SCSF+VTVNDVE P
Sbjct: 714 ITWTATDSAGNHSSCTQTVTVNDTENPTIS-------CPANITRDNDPGICGAVVVYPTPVGSDNCPGATTEQTAGLPSGSTFPVGTTTNTFKVTDSSGNMTSCSFTVTVNDVENP 822
BLAST of mRNA_M-pyrifera_M_contig111922.2492.1 vs. uniprot
Match: UPI001C8D068E (HYR domain-containing protein n=1 Tax=Crocinitomix sp. GM2_3_6_6 TaxID=2862509 RepID=UPI001C8D068E) HSP 1 Score: 120 bits (301), Expect = 6.380e-29 Identity = 68/130 (52.31%), Postives = 88/130 (67.69%), Query Frame = 1
Query: 28 GRPSGTCFNDGES-VSFSVSDSAGQTASCSWTYDLFDNESPSIDGTLSSTPCPGNIVRSTDPSACSAVVVYTTPVGTDNCPGVTTSRTAGLASGSTFPTGSTTQTFVATDAQGSTSSCSFSVTVNDVEAP 414
G+ +GT F G + VS+ V D++G TA+CS+ + DNESP + CP NI ++DP C A V YT PVGTDNCPGVTT+ TAG ASG+ FP G+T T+ ATDA G+ ++CSF+VTVND E P
Sbjct: 588 GQATGTLFPIGTTTVSYQVIDASGNTANCSFDVTVSDNESPVL-------TCPTNITVNSDPGVCGATVTYTAPVGTDNCPGVTTTMTAGQASGTVFPIGTTVVTYQATDASGNVTTCSFNVTVNDAELP 710 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig111922.2492.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig111922.2492.1 >prot_M-pyrifera_M_contig111922.2492.1 ID=prot_M-pyrifera_M_contig111922.2492.1|Name=mRNA_M-pyrifera_M_contig111922.2492.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=138bp ASLTGPTLSGRPSGTCFNDGESVSFSVSDSAGQTASCSWTYDLFDNESPSback to top mRNA from alignment at M-pyrifera_M_contig111922:49..462- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig111922.2492.1 ID=mRNA_M-pyrifera_M_contig111922.2492.1|Name=mRNA_M-pyrifera_M_contig111922.2492.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=414bp|location=Sequence derived from alignment at M-pyrifera_M_contig111922:49..462- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig111922:49..462- >mRNA_M-pyrifera_M_contig111922.2492.1 ID=mRNA_M-pyrifera_M_contig111922.2492.1|Name=mRNA_M-pyrifera_M_contig111922.2492.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=828bp|location=Sequence derived from alignment at M-pyrifera_M_contig111922:49..462- (Macrocystis pyrifera P11B4 male)back to top |