mRNA_M-pyrifera_M_contig11192.2490.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig11192.2490.1 vs. uniprot
Match: D7FS43_ECTSI (Putative: flagellar radial spoke protein 4 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS43_ECTSI) HSP 1 Score: 131 bits (329), Expect = 8.920e-35 Identity = 63/72 (87.50%), Postives = 65/72 (90.28%), Query Frame = 1
Query: 1 WPGAISVAFGKRFTNVYSGDGVKFGAEGPFQPPPPPMLQSEWAPGEDEEGLAEQADVLVDPNPPEGEGDEDE 216
WPGAI+VAFGKRFTNVYSGDGVKFG EGPFQP PPMLQ EW PGEDEEGL EQADVLVDPNPPEGE +EDE
Sbjct: 367 WPGAIAVAFGKRFTNVYSGDGVKFGGEGPFQPSLPPMLQPEWTPGEDEEGLVEQADVLVDPNPPEGEEEEDE 438
BLAST of mRNA_M-pyrifera_M_contig11192.2490.1 vs. uniprot
Match: A0A7S2XZR7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZR7_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 2.680e-17 Identity = 44/71 (61.97%), Postives = 51/71 (71.83%), Query Frame = 1
Query: 1 WPGAISVAFGKRFTNVYSGDGVKFGAEGPFQPPPPPMLQSEWAPGEDEEGLAEQADVLVDPNPPEGEGDED 213
WPGA+++AFGKRFTN+Y G G+KF + PP P LQ EW P ED+E L E DVLVDPNPPE E DED
Sbjct: 377 WPGAVAIAFGKRFTNIYVGYGLKFSPTS-YTPPMPLPLQKEWEPEEDDEPLLESEDVLVDPNPPEEE-DED 445
BLAST of mRNA_M-pyrifera_M_contig11192.2490.1 vs. uniprot
Match: A0A8K1CG11_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CG11_PYTOL) HSP 1 Score: 64.7 bits (156), Expect = 1.810e-10 Identity = 44/83 (53.01%), Postives = 50/83 (60.24%), Query Frame = 1
Query: 1 WPGAISVAFGKRFTNVYSGDGVKFGAEGPFQPPPPPMLQ-------SEWAPGEDE---------EGLAEQADVLVDPNPPEGE 201
WPGA+S+A GK+F NVY G GVKF AE P+Q P P LQ SE A GE+ EGL+EQ DVL DP PPE E
Sbjct: 365 WPGAVSIAVGKKFLNVYVGHGVKFSAE-PYQRPLPETLQVGYGIAFSEDA-GEEGADAKALLRFEGLSEQKDVLEDPTPPEEE 445
BLAST of mRNA_M-pyrifera_M_contig11192.2490.1 vs. uniprot
Match: A0A662WVF1_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WVF1_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 4.190e-9 Identity = 38/80 (47.50%), Postives = 47/80 (58.75%), Query Frame = 1
Query: 1 WPGAISVAFGKRFTNVYSGDGVKFGAEGPFQPPPPPMLQ--------SEWAPGEDEEGL-----AEQADVLVDPNPPEGE 201
WPGA+S+A GK+F NVY G G+KF GPFQ PP LQ + + GE + L AEQ D+L DP+PPE E
Sbjct: 489 WPGAVSIAVGKKFLNVYVGHGIKF-LPGPFQLSPPQRLQPGSGVGLSEDLSEGESKPTLRCEIPAEQPDLLEDPSPPEEE 567
BLAST of mRNA_M-pyrifera_M_contig11192.2490.1 vs. uniprot
Match: A0A3F2S087_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S087_9STRA) HSP 1 Score: 60.5 bits (145), Expect = 5.650e-9 Identity = 40/85 (47.06%), Postives = 51/85 (60.00%), Query Frame = 1
Query: 1 WPGAISVAFGKRFTNVYSGDGVKFGAEGPFQPPPPPMLQS--------EWAPGEDEEGL-----AEQADVLVDPNPPEGEGDEDE 216
WPGA+S+A GK+F N+Y G GVKF +E FQ PPP LQS + A GE + L EQ D+L DP+PP G+E+E
Sbjct: 368 WPGAVSIAVGKKFLNIYVGHGVKFLSES-FQLPPPQRLQSGSGVGLSEDSADGESKPTLRCEIPVEQPDLLEDPSPP---GEEEE 448
BLAST of mRNA_M-pyrifera_M_contig11192.2490.1 vs. uniprot
Match: A0A2P4XL78_9STRA (Flagellar radial spoke protein n=10 Tax=Phytophthora TaxID=4783 RepID=A0A2P4XL78_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 1.060e-8 Identity = 37/77 (48.05%), Postives = 46/77 (59.74%), Query Frame = 1
Query: 1 WPGAISVAFGKRFTNVYSGDGVKFGAEGPFQPPPPPMLQ--------SEWAPGEDEEGL-----AEQADVLVDPNPP 192
WPGA+S+A GK+F NVY G GVK+ +E PFQ PPP LQ + A GE + L EQ D+L DP+PP
Sbjct: 368 WPGAVSIAVGKKFLNVYVGHGVKYLSE-PFQLPPPQRLQVGSGVSTSEDSADGEGKPTLRCEIPVEQPDLLEDPSPP 443
BLAST of mRNA_M-pyrifera_M_contig11192.2490.1 vs. uniprot
Match: A0A0P1AK23_PLAHL (Radial spokehead-like protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AK23_PLAHL) HSP 1 Score: 57.8 bits (138), Expect = 5.040e-8 Identity = 37/82 (45.12%), Postives = 49/82 (59.76%), Query Frame = 1
Query: 1 WPGAISVAFGKRFTNVYSGDGVKFGAEGPFQPPPPPMLQS--------EWAPGEDEEGLA-----EQADVLVDPNPPEGEGD 207
WPGA+S+A GK+F N+Y G GVKF AE P+Q P P LQ+ E + +D+ L+ EQ D+L DP+PP E D
Sbjct: 364 WPGAVSIAVGKKFCNIYVGHGVKFRAE-PYQLPLPQQLQTGSGVSWSEETSDVDDKPTLSCVLPVEQPDLLEDPSPPTDEED 444
BLAST of mRNA_M-pyrifera_M_contig11192.2490.1 vs. uniprot
Match: H3GLW4_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GLW4_PHYRM) HSP 1 Score: 57.8 bits (138), Expect = 5.040e-8 Identity = 36/76 (47.37%), Postives = 44/76 (57.89%), Query Frame = 1
Query: 1 WPGAISVAFGKRFTNVYSGDGVKFGAEGPFQPPPPPMLQ--------SEWAPGEDEEGL-----AEQADVLVDPNP 189
WPGA+S+A GK+F NVY G+GVKF +E PFQ PPP LQ + GE + L EQ D+L DP P
Sbjct: 368 WPGAVSIAVGKKFLNVYVGNGVKFLSE-PFQLPPPQRLQPGSGVGLSEDAGDGESKPALHCEVPVEQPDLLEDPAP 442
BLAST of mRNA_M-pyrifera_M_contig11192.2490.1 vs. uniprot
Match: A0A8J5J9A3_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5J9A3_9STRA) HSP 1 Score: 57.0 bits (136), Expect = 9.670e-8 Identity = 35/77 (45.45%), Postives = 42/77 (54.55%), Query Frame = 1
Query: 1 WPGAISVAFGKRFTNVYSGDGVKFGAEGPFQPPPPPMLQSEWAPGEDEEGL-------------AEQADVLVDPNPP 192
WPGA+S+A GK+F NVY G GVKF +E PFQ PP LQ G E+ EQ D+L DP+PP
Sbjct: 745 WPGAVSIAVGKKFLNVYVGHGVKFLSE-PFQLAPPQRLQVGSCVGMSEDNAEGDGKPTLRCEIPVEQPDLLEDPSPP 820
BLAST of mRNA_M-pyrifera_M_contig11192.2490.1 vs. uniprot
Match: A0A5D6XUV5_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XUV5_9STRA) HSP 1 Score: 55.1 bits (131), Expect = 4.500e-7 Identity = 34/86 (39.53%), Postives = 45/86 (52.33%), Query Frame = 1
Query: 1 WPGAISVAFGKRFTNVYSGDGVKFGAEGPFQPPPPPMLQSEWA-----------------PGEDEEGLAEQADVLVDPNPPEGEGD 207
WPGA+ +A GK+F NVY G+G KF E P+Q PP +Q+ + P + L EQ D+L DP PPE EG+
Sbjct: 353 WPGAVGIAVGKKFLNVYVGNGAKFSPE-PYQLQPPLPVQAGYXXXXXXXXXXXXXDAGPRPVLRFDALVEQKDLLEDPTPPEDEGE 437 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11192.2490.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig11192.2490.1 >prot_M-pyrifera_M_contig11192.2490.1 ID=prot_M-pyrifera_M_contig11192.2490.1|Name=mRNA_M-pyrifera_M_contig11192.2490.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=73bp WPGAISVAFGKRFTNVYSGDGVKFGAEGPFQPPPPPMLQSEWAPGEDEEGback to top mRNA from alignment at M-pyrifera_M_contig11192:304..522+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig11192.2490.1 ID=mRNA_M-pyrifera_M_contig11192.2490.1|Name=mRNA_M-pyrifera_M_contig11192.2490.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=219bp|location=Sequence derived from alignment at M-pyrifera_M_contig11192:304..522+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig11192:304..522+ >mRNA_M-pyrifera_M_contig11192.2490.1 ID=mRNA_M-pyrifera_M_contig11192.2490.1|Name=mRNA_M-pyrifera_M_contig11192.2490.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=438bp|location=Sequence derived from alignment at M-pyrifera_M_contig11192:304..522+ (Macrocystis pyrifera P11B4 male)back to top |