mRNA_M-pyrifera_M_contig11188.2482.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig11188.2482.1
Unique NamemRNA_M-pyrifera_M_contig11188.2482.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig11188.2482.1 vs. uniprot
Match: D7FHX7_ECTSI (FHA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHX7_ECTSI)

HSP 1 Score: 300 bits (768), Expect = 1.530e-98
Identity = 170/260 (65.38%), Postives = 192/260 (73.85%), Query Frame = 1 
Query:   13 QNDEPCAFAKLWGQLDGLPFHCYMTSLPSTLGRGSIATQGSRKPAGFIDLGQSKALSREHATIKWVPEQKTYQITCLSKNGMVVSGCYHAKGGVENLESRTPIKLGPASMYFLLPEKVSQRPTAPAAPTVLSVLKRFLPPPLEGAGRCLRMASPRPAPPFRQ-LRAYGTPPGAVKASPAPVVAAAA-----VSFEGMIRGAFRSPALAATAGASG-LSSGDVHNWIMQNYPEWNQEGARMRTLATGIDSALKKSFSSSGG 771
            ++DEPCAFAKLWGQLDG PFH Y+T LPSTLGRGS AT+G+RK AGFIDLG+SKALSREHA I WVP QK+YQI C+SKNGMVV+G YHAKGGVE LESR PIKLGPASMYFLLPE+ +Q+P APA  T ++   R  PPP   A +   + S RPAPP  Q L    + P AV A  A  VAAAA     VSF  MI  AFRS  L+A A ASG LSSGDV NWIMQ YPEWN+EG RM+ LA GI+ AL +SF S GG
Sbjct:    7 KDDEPCAFAKLWGQLDGAPFHTYVTQLPSTLGRGSQATEGARKSAGFIDLGRSKALSREHAVITWVPSQKSYQIKCMSKNGMVVAGSYHAKGGVEKLESRAPIKLGPASMYFLLPEREAQKP-APAPATAVAA-PRVTPPPAASAPQAKPLES-RPAPPSSQGLPPENSAPAAVVAPSATTVAAAAPAPAPVSFGDMISQAFRSRELSAVAAASGGLSSGDVQNWIMQAYPEWNKEGPRMKALAVGIEEALNESFVSRGG 263
[Close]
BLAST of mRNA_M-pyrifera_M_contig11188.2482.1 vs. uniprot
Match: A0A6H5JLB0_9PHAE (FHA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLB0_9PHAE)

HSP 1 Score: 282 bits (721), Expect = 3.380e-92
Identity = 164/273 (60.07%), Postives = 185/273 (67.77%), Query Frame = 1 
Query:   13 QNDEPCAFAKLWGQLDGLPFHCYMTSLPSTLGRGSIATQGSRKPAGFIDLGQSKALSREHATIKWVPEQKTYQITCLSKNGMVVSGCYHAKGGVENLESRTPIKLGPASMYFLLPEKVSQRPTAPAAPTVLSVLKRFLPPPLEGAGRCLRMASPRPAPPFRQLRAYGTPPG-----AVKASPAPVVAA--------------AAVSFEGMIRGAFRSPALAATAGASG-LSSGDVHNWIMQNYPEWNQEGARMRTLATGIDSALKKSFSSSGG 771
            ++DEPCAFAKLWGQLDG PFH Y+T LPSTLGRGS AT+G+RK AGFIDLG+SKALSREHA I WVP QK+YQI C+SKNGMVV+G YHAKGGVE LESR PIKLGPASMYFLLPE+ +Q+P         +   R  PPP     +   + S RPAPP  Q    G PP      AV A  A  VAA              A VSF  M+  AFRS  L+A A ASG LSSGDV NWIMQ YPEWN+EG RM+ LA GI+ AL +SF S GG
Sbjct:    7 KDDEPCAFAKLWGQLDGAPFHTYVTQLPSTLGRGSQATEGARKSAGFIDLGRSKALSREHAVITWVPSQKSYQIKCMSKNGMVVAGSYHAKGGVEKLESRAPIKLGPASMYFLLPEREAQKPAXXXX--XXAAAPRVTPPPAASTPQGKPLDS-RPAPPSSQ----GLPPENSVTTAVVAPSATTVAAXXAVANPAVPAPAPATVSFGDMVCQAFRSRELSAVAAASGGLSSGDVQNWIMQAYPEWNKEGPRMKALAVGIEEALNESFVSRGG 272
[Close]
BLAST of mRNA_M-pyrifera_M_contig11188.2482.1 vs. uniprot
Match: A0A024GCA3_9STRA (FHA domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GCA3_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 2.660e-19
Identity = 50/111 (45.05%), Postives = 70/111 (63.06%), Query Frame = 1 
Query:   25 PCAFAKLWGQL-DGLPFHCYMTSLPSTLGRGSIATQGSRKPAGF-IDLGQSKALSREHATIKWVPEQKTYQITCLSKNGMVVSGCYHAKGGVENLESRTPIKLGPASMYFL 351
            P A+AKL G++ D   F   +T LP+ LGRG I        +G  I LG+ KA+SR+HA I W  E+  +++ CL KNG+ V+G + AK  V  L S+TPI++GPA +YFL
Sbjct:   27 PLAYAKLSGRIADDQAFEALITHLPTELGRGPIVPSSGPVASGSRISLGEQKAISRQHAKILWNAEKCCFEMECLGKNGLFVNGSFIAKNQVIPLTSKTPIRIGPARLYFL 137
[Close]
BLAST of mRNA_M-pyrifera_M_contig11188.2482.1 vs. uniprot
Match: F0W989_9STRA (Uncharacterized protein AlNc14C39G3356 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W989_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 5.200e-19
Identity = 49/111 (44.14%), Postives = 69/111 (62.16%), Query Frame = 1 
Query:   25 PCAFAKLWGQL-DGLPFHCYMTSLPSTLGRGSIATQGSRKPAGF-IDLGQSKALSREHATIKWVPEQKTYQITCLSKNGMVVSGCYHAKGGVENLESRTPIKLGPASMYFL 351
            P A+AKL G++ D   F   +T LP+ LGRG I        +G  I LG+ KA+SR+HA I W  E+  +++ CL KNG+ V+G +  K  V  L S+TPI++GPA +YFL
Sbjct:   27 PLAYAKLSGRIADDQVFEALITHLPTELGRGPIVPPSGTVASGARISLGEQKAISRQHAKIFWNTEKCCFEMECLGKNGLFVNGSFVTKDQVIPLTSKTPIRIGPARLYFL 137
[Close]
BLAST of mRNA_M-pyrifera_M_contig11188.2482.1 vs. uniprot
Match: A0A7S0XM49_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chrysocystis fragilis TaxID=1411660 RepID=A0A7S0XM49_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 6.460e-16
Identity = 49/141 (34.75%), Postives = 73/141 (51.77%), Query Frame = 1 
Query:   19 DEPCAFAKLWGQL--------DGLPFHCYMTSLPSTLGRGSIATQGSRKPAGFIDLGQSKALSREHATIKWVPEQKTYQITCLSKNGMVVSGCYHAKGGVENLESRTPIKLGPASMYFLLPEKVSQRPTAPAAPTVLSVLK 417
            +E   FAKL G+L        +   F   + S    LGR           A F+ LG +K++SR HATI+WV E   ++I C+SKNGMVV   ++ +G    LE ++ +KLGP ++YF+LP    +    P   T   ++K
Sbjct:   53 EEGPIFAKLQGKLLYMEDPEAEAEEFEASIGSATVRLGRSGAEADS----AEFVGLGNTKSISRHHATIRWVRETDRWEIVCMSKNGMVVDKAFYGRGETVALEHKSSVKLGPCAIYFVLPSDDDRDSNKPGKHTYAELVK 189
[Close]
BLAST of mRNA_M-pyrifera_M_contig11188.2482.1 vs. uniprot
Match: A0A1R2C7H0_9CILI (FHA domain-containing protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2C7H0_9CILI)

HSP 1 Score: 68.6 bits (166), Expect = 8.520e-11
Identity = 42/117 (35.90%), Postives = 59/117 (50.43%), Query Frame = 1 
Query:    7 KGQNDEPCAFAKLWGQLDGLPFHCYMTSLPSTLGRGSIATQGSRKPAGFIDLGQSKALSREHATIKWVPEQKTYQITCLSKNGMVVSGCYHAKGGVENLESRTPIKLGPASMYFLLP 357
            K Q   P  +AKL+G+       C +      LGR    T    K   FI LG  K +SR+HA I W  ++  +QI  + KN ++V+        + +L  +TPIK+GPA  YFLLP
Sbjct:   42 KRQATNPSGYAKLYGK----EISCIIQYTEVILGR----TNPKNKKECFIPLGDHKKISRKHAKIFWNTDKGCFQIQNIGKNPIIVNKVDVLSNEIVDLLGKTPIKIGPACFYFLLP 150
[Close]
BLAST of mRNA_M-pyrifera_M_contig11188.2482.1 vs. uniprot
Match: A0A0G4IN48_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IN48_PLABS)

HSP 1 Score: 70.5 bits (171), Expect = 3.940e-10
Identity = 47/117 (40.17%), Postives = 64/117 (54.70%), Query Frame = 1 
Query:   31 AFAKLWGQLDGLPFHCYMTSLPSTLGRGSIATQGSRKPAGFIDLGQSKALSREHATIKWVPEQKTYQITCLSKNGMVVSGCYHAKGGVEN----LESRTPIKLGPASMYFLLPEKVS 369
            AFAKL G  +   F  Y+T    TLGR +  +         + LG +K +SR HA I W P+  ++++TCLSKNG+ V G      G  N    L SRT I++GP  +YFLLP+  S
Sbjct:    5 AFAKLLGDNN---FVHYVTKETLTLGRTAAQSD--------VVLGDNKNISRCHARIAWNPDTSSFELTCLSKNGVFVDG---QLSGPSNPPVPLHSRTLIQIGPRLIYFLLPKSTS 107
[Close]
BLAST of mRNA_M-pyrifera_M_contig11188.2482.1 vs. uniprot
Match: A0A7S2RKJ0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RKJ0_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 1.860e-9
Identity = 40/117 (34.19%), Postives = 62/117 (52.99%), Query Frame = 1 
Query:   52 QLDGLPFHCYMTSLPSTLGRGSIATQGSRKPAGFIDLGQSKALSREHATIKWVPEQKTYQITCLSKNGMVVSGCYHA-KGGVENLESRTPIKLGPASMYFLLPEKVSQRPTAPAAPT 399
            +L       ++  L  TLGR   A    R P   + L + K LSR HA ++W PE++++ I CLSKNGM V+  +++ +     ++S   I+LGP   YF LP  +++ P   A  T
Sbjct:   32 ELPATRIDAFIHHLRCTLGRTPTAGD-DRAPESLVPLSEKKLLSRHHAEMRWEPEEESWVIQCLSKNGMHVNRVFYSVEDPAVPIKSGAAIRLGPCYFYFCLP--LAEEPNGKAPTT 145
[Close]
BLAST of mRNA_M-pyrifera_M_contig11188.2482.1 vs. uniprot
Match: A0A137NZQ4_CONC2 (Uncharacterized protein n=1 Tax=Conidiobolus coronatus (strain ATCC 28846 / CBS 209.66 / NRRL 28638) TaxID=796925 RepID=A0A137NZQ4_CONC2)

HSP 1 Score: 60.5 bits (145), Expect = 7.260e-7
Identity = 37/114 (32.46%), Postives = 62/114 (54.39%), Query Frame = 1 
Query:   31 AFAKLWGQLDGLPFHCYMTSLPSTLGRGSIATQGSRKPAGFIDLGQSKALSREHATIKWVPEQKTYQITCLSKNGMVVSGCYHAKGGVENLESRTPIKLGPASMYFLLPEKVSQ 372
            A  + + +L+G     YM  L  T+GR  I  Q        +DLG +KA+SR+HA I +    + ++++   KNG+V+   ++ KG    LE  + I++G  + YFLLP+  S+
Sbjct:   19 AHVQAYAKLEGDDVCYYMKELHITIGR-KINPQDDIN----VDLGPTKAISRQHAKIYYNLVDQKFELSVQGKNGVVIDDVFYKKGSNIKLEHGSKIQIGNQTFYFLLPKIPSE 127
[Close]
BLAST of mRNA_M-pyrifera_M_contig11188.2482.1 vs. uniprot
Match: A0A2P6VGC4_9CHLO (Fork head transcription factor 1-like isoform X2 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VGC4_9CHLO)

HSP 1 Score: 59.7 bits (143), Expect = 1.200e-6
Identity = 41/118 (34.75%), Postives = 61/118 (51.69%), Query Frame = 1 
Query:   28 CAFAKLWGQLDGLPFHCYMTSLPSTLGRGSIATQGSRKPAGFIDLGQSKALSREHATIKWVPEQKTYQITCLSKNGMVVSGCYHAKGGVENLESRTPI------KLGPA-SMYFLLPE 360
            C FAKL G  DG      + S    LGR S      +  +  + L + KA+SREHA I++  + K +++  L KNG+ V+G  H  GG     +R P+      ++G + S YFLLP+
Sbjct:   13 CGFAKLCG--DGGKLDYVIRSYEVLLGRAS------KGKSVDVQLAEHKAVSREHAYIRYYFDNKRFELEVLGKNGVKVNGVEHKPGGAGAAPTRVPLHSQSHLQIGDSLSFYFLLPK 122
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11188.2482.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
D7FHX7_ECTSI1.530e-9865.38FHA domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JLB0_9PHAE3.380e-9260.07FHA domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A024GCA3_9STRA2.660e-1945.05FHA domain-containing protein n=1 Tax=Albugo candi... [more]
F0W989_9STRA5.200e-1944.14Uncharacterized protein AlNc14C39G3356 n=1 Tax=Alb... [more]
A0A7S0XM49_9STRA6.460e-1634.75Hypothetical protein (Fragment) n=1 Tax=Chrysocyst... [more]
A0A1R2C7H0_9CILI8.520e-1135.90FHA domain-containing protein n=1 Tax=Stentor coer... [more]
A0A0G4IN48_PLABS3.940e-1040.17Uncharacterized protein n=1 Tax=Plasmodiophora bra... [more]
A0A7S2RKJ0_9STRA1.860e-934.19Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A137NZQ4_CONC27.260e-732.46Uncharacterized protein n=1 Tax=Conidiobolus coron... [more]
A0A2P6VGC4_9CHLO1.200e-634.75Fork head transcription factor 1-like isoform X2 n... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig11188contigM-pyrifera_M_contig11188:5063..9776 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score302.4
Seed ortholog evalue2.1e-79
Seed eggNOG ortholog2880.D7FHX7
Preferred nameFOXK1
KEGG koko:K09404
Hectar predicted targeting categoryother localisation
GOsGO:0000981,GO:0002252,GO:0002376,GO:0003674,GO:0003700,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006355,GO:0006357,GO:0006950,GO:0006952,GO:0007154,GO:0007267,GO:0007275,GO:0007494,GO:0007495,GO:0008150,GO:0009605,GO:0009607,GO:0009615,GO:0009653,GO:0009889,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0023052,GO:0030154,GO:0031323,GO:0031326,GO:0032501,GO:0032502,GO:0035295,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0048518,GO:0048565,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0051607,GO:0051704,GO:0051707,GO:0055123,GO:0060255,GO:0065007,GO:0080090,GO:0098542,GO:0098586,GO:0140110,GO:1903506,GO:2000112,GO:2001141
EggNOG free text desc.sequence-specific DNA binding
EggNOG OGsCOG5025@1,KOG2294@2759
Ec32 ortholog descriptionForkhead-associated (FHA) domain
Ec32 orthologEc-12_006270.1
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03000
Exons6
Model size771
Cds size771
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig11188.2482.1prot_M-pyrifera_M_contig11188.2482.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig11188 5063..9776 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815632.0419612-CDS-M-pyrifera_M_contig11188:5062..51561622815632.0419612-CDS-M-pyrifera_M_contig11188:5062..5156Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11188 5063..5156 -
1692277496.4594343-CDS-M-pyrifera_M_contig11188:5062..51561692277496.4594343-CDS-M-pyrifera_M_contig11188:5062..5156Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11188 5063..5156 -
1622815632.0519426-CDS-M-pyrifera_M_contig11188:5430..55851622815632.0519426-CDS-M-pyrifera_M_contig11188:5430..5585Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11188 5431..5585 -
1692277496.4714952-CDS-M-pyrifera_M_contig11188:5430..55851692277496.4714952-CDS-M-pyrifera_M_contig11188:5430..5585Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11188 5431..5585 -
1622815632.0634384-CDS-M-pyrifera_M_contig11188:5795..59091622815632.0634384-CDS-M-pyrifera_M_contig11188:5795..5909Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11188 5796..5909 -
1692277496.4810534-CDS-M-pyrifera_M_contig11188:5795..59091692277496.4810534-CDS-M-pyrifera_M_contig11188:5795..5909Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11188 5796..5909 -
1622815632.0767167-CDS-M-pyrifera_M_contig11188:6044..61571622815632.0767167-CDS-M-pyrifera_M_contig11188:6044..6157Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11188 6045..6157 -
1692277496.490162-CDS-M-pyrifera_M_contig11188:6044..61571692277496.490162-CDS-M-pyrifera_M_contig11188:6044..6157Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11188 6045..6157 -
1622815632.0881474-CDS-M-pyrifera_M_contig11188:6886..69881622815632.0881474-CDS-M-pyrifera_M_contig11188:6886..6988Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11188 6887..6988 -
1692277496.506312-CDS-M-pyrifera_M_contig11188:6886..69881692277496.506312-CDS-M-pyrifera_M_contig11188:6886..6988Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11188 6887..6988 -
1622815632.100263-CDS-M-pyrifera_M_contig11188:9583..97761622815632.100263-CDS-M-pyrifera_M_contig11188:9583..9776Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11188 9584..9776 -
1692277496.51525-CDS-M-pyrifera_M_contig11188:9583..97761692277496.51525-CDS-M-pyrifera_M_contig11188:9583..9776Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11188 9584..9776 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig11188.2482.1

>prot_M-pyrifera_M_contig11188.2482.1 ID=prot_M-pyrifera_M_contig11188.2482.1|Name=mRNA_M-pyrifera_M_contig11188.2482.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=257bp
MSKGQNDEPCAFAKLWGQLDGLPFHCYMTSLPSTLGRGSIATQGSRKPAG
FIDLGQSKALSREHATIKWVPEQKTYQITCLSKNGMVVSGCYHAKGGVEN
LESRTPIKLGPASMYFLLPEKVSQRPTAPAAPTVLSVLKRFLPPPLEGAG
RCLRMASPRPAPPFRQLRAYGTPPGAVKASPAPVVAAAAVSFEGMIRGAF
RSPALAATAGASGLSSGDVHNWIMQNYPEWNQEGARMRTLATGIDSALKK
SFSSSGG
back to top

mRNA from alignment at M-pyrifera_M_contig11188:5063..9776-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig11188.2482.1 ID=mRNA_M-pyrifera_M_contig11188.2482.1|Name=mRNA_M-pyrifera_M_contig11188.2482.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4714bp|location=Sequence derived from alignment at M-pyrifera_M_contig11188:5063..9776- (Macrocystis pyrifera P11B4 male)
ATGAGTAAAGGTCAAAACGACGAGCCTTGCGCCTTCGCTAAGCTCTGGGG
GCAGCTGGACGGCTTACCTTTTCACTGCTACATGACGTCCCTCCCCTCGA
CTCTTGGCCGAGGATCGATAGCTACACAGGGATCGCGGAAGCCGGCCGGG
TTCATCGACTTGGGTCAATCGAAAGCTCTCTCCAGAGAGCACGGTGAGGG
AGATTTCTGTTTTTTCTTGTCAGCAGGGTTGTGCTTTGTGGGAGTTGGTC
TGTTGACGTTGTCGGAGCCCCCGTCCTGGAAGGGTCAAACGGCTGAACCC
GGCTTCCTCCTCTCTCGCAGATACTGCTGTATCTGCGACCTCATTCCACA
CTCCACACCCATCGTCTCTCGTTGCAATGAGCCAACGGTTGGGGCTCTCT
CAAACTGCCTTCGTCTATGTGGGCAGACCGCTCTGCGACGTGTGTGCTCG
ACCATTTGTCGCCGACAGGCTCAGGGCCGACGCCGCCAGTCGTGGTCGGG
CTGAGATTGTCGACAGGATTATTCCAGGACATGCGAGGACATATTTTGTA
GCATCAACCCCAACCCTCGCGCTTCGGTACCTGGTAAACACCGGTACCCC
GTATCATGCTCTTGTGTACAGCAGTACTGGTGTGAACGAAACCTGAAACC
CGATCCTCGCGGTTCCCGGTATATGTATCAAACGATCGCTTGAGGGGTAC
AACGTGCAAGTACAACCACCAAGGTGTTCGTTTATGGGGCACTCTATGCC
ATCAGCTCGGTACTCCCATCGTTGTCCGACTAGCTGCCGCCGCGTAAGGC
CAACCGCGCGGGGTTGGTTCCTCGCAATTCTCCTGTACAGCAGAGTGCTG
CCGTACACCACGAGTCCACGCGCCACGCACCTAGATGAAACATTCGCCGA
AAAAACACGCGCATATATTGGGAACTCTTTTGAGTTCTGTGAACGACACG
GCGGTGGCCGCAGGGGGCAAGGTTGATCAGATGCCAAGACTGGCTGTGCG
TTTGCGATCTCCGGCCTACATGTTGCTCTTGTCGGCGTGATGCTGCGGCC
TCCGTCGGAGGCCCAATGCTTGCTGTGCGTGCGTTCACTGCATTGGGTGG
AAGCATCGTCACAGATCGTTGGCGTATCGGCGTACTGGTACCTGGTAGGT
ACCTCCCAAAGTCTGGGGATGTTGGTAAGCTTCGTTACTGCTGCTGCTGC
TGCTGCTGCTGCTGCTGCTGTACTCACCTTGTCGCCCGCGTATATGGCCA
CGTCACGCCATACGAACCTGCTTCGGCGTACTGCTGTACCAATACCCAAC
CTGGAAACGGGTTGTGAGTAACGGCTCCAGTGGCATGAATAATTAATGGT
ACGAGGTATTAATAGTGGTCGGAACCCAAGGAGAGCGGATTATGCTGGGT
GATACGATGTACCTATGTACTGCTGTATACCTGGTACAAGCGTAGCGTAA
CGTGTAACGAATGTCGCGTGTAAAACGTAAAAACACCCCCGAGATCTTAC
TACTGCTGTTTGTAGTTTCAGCAGGTGCGCGTAACACGTACGGCAGGTAC
TTATCATGGGTACGGCAGTGGTTGGTCGACTACGACTTCCCCCCTCCGCC
CGCTGCAGTCAAGAGCTCTGCTCACTGTCGGACAGGAATCGTGCGACTCT
CTTGAAGTCCGCTGCATGATGCAGATTCTATGTACCTCTGGTACCTTGTA
CTGGTACCTGGTACGTATTATGTGATACCTCGTACTGCTGTACATGCAAC
ACCCTGGACGCAGACGTGTTTTTTTCATGTATTACTATTACGGGGTCCAT
AGTTAACGGGACCCAATTTTGTTAGTAAAAATAGGTAAATATATAGGTTT
TTATGTGTACCATAGGTCCTATTAACTATGGACCCCCGTAATAGTACGAT
GTCAATTCGTAGTACTCCTGTACCAGGTAGTCTCCGCAGCTTCCCAATAA
AACACACCCTGTCGGAAATCGAAAGCGTGGCCGGCAATGAGACGGTGTAC
CCCTAGCTTGCCTGGTACATCTGTTGCTGTGTCGTATTAAGGGTGTCATG
GCGTCTTTTCTCGAACACTGACGATGCCGACGGTGTTTCGATTCCTCTTG
ACGCTTACGCACGAGTATACTAGACTCGGTTAGGTATTATACTATTATTA
CCAGGTACATTATTTCATGCTACCAATACAGCGGTGAATCCCTCCCCCAA
CCATCATATCGAGTACCCCCCCCCCCCGCTCTGTTTCCCCTTGACAACTG
CATACACGTTTTGGGGACACAGTTTACTTTGAATTAGAATAGACTTATTT
TCGCAGTGTTGTGAAAAAAGTTCATTCGTTCATTTGAGTGCGCTTATTGT
CTCTGCTTGCTGGCTTTTTTTTTTTTTTTTTTTATCACTTTTACTTTCCA
ACCTAGCTCGTACGAGGTTTTACGCTCAGATATCTTCTTGACAAGTCTTG
GTCACAGATGTCGTCCCTTCTCCCCCCCGGTACGTGCCTTTTTTTTGTCG
CGCAAAGGGCTCATGTATTCCCACTGCTCGTCGACTTTCATCGAATGTAG
CTAACTCACGCTCTCGCGCTTTCCGCTAATCAAATTTTTTTATGCAAGAA
AAACTCCCTACAAAAGAGCAAGCAATCGGTGAGACTCGAACCCACGAAAT
TAATCTTGATAGGCACGCGGACCACCTACCAAGCCACCGGGGACGCCGAC
TCATTACTGATCAATCACCCCTTGCATATTTCCTGATGTTCCCTCGTCTT
TCGCCGTTGGACGCGAATGTATCTATCTACACGTGAAGCCACTATTAAGT
GGGTGCCGGAGCAAAAGACGTATCAGATCACGTGCCTGAGCAAGAATGGC
ATGGTCGTGTCGGGGTGCTATCACGCGAAGGGCGGTGTCGGTGAGGATCA
AGCGAAACGCGGCAGTTGCTGAGCCGAAGCTGCCGCATGAGGCGGTGTTG
GGTTGGGGGGCGATATTATGGGCTACTCTGCTGCCCGCCCACCAGCATAA
GAGTCCCAACGTACTTTGCAAGCTTGGTGCTGTGTTTATAGCGGACGTTT
TTTATATGTTCATTTGCCACCTCTGTGATCCCTCGATGAGCAGAGAGGCC
CAGTTAGAAAACGCGTACAAAATAATGAGGAAATGGGATGGGGAATAGCC
CGGGATACATCTACAGCATTGACCCCTATAGCACTGTATCCGCATTTTTG
GGTCCAAACTGCTTGGATTTAGCGCGATATCAATTTTTACGGCGGGGCCA
ATATTTAAAAGGCTCTGATGACGTCATGGCCATTGCGCACGTGCGCACGC
CATTGGAGCGCAGTTATACAGAACTGACGGGAGAACACGCGTGCCACATT
TTTTTTTTTTTTTTTTTTTTCCTCCGCCTGAAACGCATAGAGCGTGTACA
AGTACTGTAGTATCTATCACCTGCTGCTTTAGGTTTTTTCCCCTGTTGAC
GGCATCTGTTGGTCGACGCTCCGGCCCTCGACCACAGCAGTGCGCCACAT
GCTATGCCAAGCTGGCCAACCATGGGAACACAGCACACGTTTTTCCTGGT
ACTGCTGTGTTCGTTTATTTTTTTGTTGTTTTAACACGCGTCGCGCCCTT
TTCGTGAAAATTGACGCAGAGAATCTGGAGTCGCGAACACCAATCAAGCT
GGGGCCGGCGTCGATGTACTTTCTCCTGCCGGAGAAGGTCTCGCAACGAC
CAACGGCTCCGGCCGCGCCGACGGTCTTATCGGTACCTCAACAGCCGGTG
AGTGCTCGCACGCAGCGCATGACGAGTCTGAGAAGCGGGCGGCCTGATCC
AGAGCGAAAGGGAGCGGGGGGTGGCGTGTTTGCGTGGGGTGGCGGCCTCG
CATACGCCTTATCATAGGTCTTGAAACGGTTCTTGCCGCCTCCACTGGAG
GGTGCCGGACGGTGCTTACGGATGGCCTCGCCTCGCCCCGCCCCTCCGTT
TCGCCAGCTCCGCGCGTATGGCACACCGCCGGTTGCCTGTGCCTCCAGCA
ACGAGTTTTATTTTCGTCGTCAACTTCTCTCTGCCTTGTACCCTTCCAGC
TACAAGTCAAGTTCGTCGTCAAATTCTCTTTGCAATATACCCTCCAGCAA
CTATTTAATTTCGTCGCCATTTTTCTAATTGCCGGCGTCTGGTCCCCGGC
CCGATCAGGCTCCGGTTTCTGGGCAACCGCGGGCGTCGCAGGGGGCAGTG
AAAGCGTCGCCGGCTCCGGTGGTGGCCGCTGCAGCGGTTTCGTTCGAAGG
CATGATCCGCGGAGCCTTCAGGAGTCCGGCGTTGGCAGCCACCGCCGGTG
CCTCAGGGTTATCGAGCGGAGACGTGCACAACTGGATTATGCAGAAGTGA
GTTTGCTGCATAGTAGGGACCGGTCGGAGTCGAGGGAGGGAGACTAGAAG
GGCAGCTATTTTACACCCATCAATAGTTTTTTTTTTTGAAACATAAACCA
TGAGCCGTCGACGTGACTGTTAGCTAGCTAGCTAAAGGTGGCTTATGTTC
GACTACGACGGCGCCGCGCAGGTGAGATGCCGCGATTGCATCGCCGTCCG
GACGATCCCACGCCGTTCCCCCCCTTCCCTCCCCCCCCTTCCCGTCTCAT
GGCACCGCGCGTACGTGCAGCTACCCCGAGTGGAATCAAGAAGGAGCGAG
GATGAGAACGCTGGCTACCGGCATCGACAGCGCGCTGAAGAAAAGCTTTT
CGTCAAGTGGGGGC
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig11188:5063..9776-

>mRNA_M-pyrifera_M_contig11188.2482.1 ID=mRNA_M-pyrifera_M_contig11188.2482.1|Name=mRNA_M-pyrifera_M_contig11188.2482.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1542bp|location=Sequence derived from alignment at M-pyrifera_M_contig11188:5063..9776- (Macrocystis pyrifera P11B4 male)
ATGAGTAAAGGTCAAAACGACGAGCCTTGCGCCTTCGCTAAGCTCTGGGG
GCAGCTGGACGGCTTACCTTTTCACTGCTACATGACGTCCCTCCCCTCGA
CTCTTGGCCGAGGATCGATAGCTACACAGGGATCGCGGAAGCCGGCCGGG
TTCATCGACTTGGGTCAATCGAAAGCTCTCTCCAGAGAGCACGATGAGTA
AAGGTCAAAACGACGAGCCTTGCGCCTTCGCTAAGCTCTGGGGGCAGCTG
GACGGCTTACCTTTTCACTGCTACATGACGTCCCTCCCCTCGACTCTTGG
CCGAGGATCGATAGCTACACAGGGATCGCGGAAGCCGGCCGGGTTCATCG
ACTTGGGTCAATCGAAAGCTCTCTCCAGAGAGCACGCCACTATTAAGTGG
GTGCCGGAGCAAAAGACGTATCAGATCACGTGCCTGAGCAAGAATGGCAT
GGTCGTGTCGGGGTGCTATCACGCGAAGGGCGGTGTCGCCACTATTAAGT
GGGTGCCGGAGCAAAAGACGTATCAGATCACGTGCCTGAGCAAGAATGGC
ATGGTCGTGTCGGGGTGCTATCACGCGAAGGGCGGTGTCGAGAATCTGGA
GTCGCGAACACCAATCAAGCTGGGGCCGGCGTCGATGTACTTTCTCCTGC
CGGAGAAGGTCTCGCAACGACCAACGGCTCCGGCCGCGCCGACGGTCTTA
TCGAGAATCTGGAGTCGCGAACACCAATCAAGCTGGGGCCGGCGTCGATG
TACTTTCTCCTGCCGGAGAAGGTCTCGCAACGACCAACGGCTCCGGCCGC
GCCGACGGTCTTATCGGTCTTGAAACGGTTCTTGCCGCCTCCACTGGAGG
GTGCCGGACGGTGCTTACGGATGGCCTCGCCTCGCCCCGCCCCTCCGTTT
CGCCAGCTCCGCGCGTATGGCACACCGCCGGTCTTGAAACGGTTCTTGCC
GCCTCCACTGGAGGGTGCCGGACGGTGCTTACGGATGGCCTCGCCTCGCC
CCGCCCCTCCGTTTCGCCAGCTCCGCGCGTATGGCACACCGCCGGGGGCA
GTGAAAGCGTCGCCGGCTCCGGTGGTGGCCGCTGCAGCGGTTTCGTTCGA
AGGCATGATCCGCGGAGCCTTCAGGAGTCCGGCGTTGGCAGCCACCGCCG
GTGCCTCAGGGTTATCGAGCGGAGACGTGCACAACTGGATTATGCAGAAG
GGGCAGTGAAAGCGTCGCCGGCTCCGGTGGTGGCCGCTGCAGCGGTTTCG
TTCGAAGGCATGATCCGCGGAGCCTTCAGGAGTCCGGCGTTGGCAGCCAC
CGCCGGTGCCTCAGGGTTATCGAGCGGAGACGTGCACAACTGGATTATGC
AGAACTACCCCGAGTGGAATCAAGAAGGAGCGAGGATGAGAACGCTGGCT
ACCGGCATCGACAGCGCGCTGAAGAAAAGCTTTTCGTCAAGTGGGGGCCT
ACCCCGAGTGGAATCAAGAAGGAGCGAGGATGAGAACGCTGGCTACCGGC
ATCGACAGCGCGCTGAAGAAAAGCTTTTCGTCAAGTGGGGGC
back to top