mRNA_M-pyrifera_M_contig111839.2476.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig111839.2476.1 vs. uniprot
Match: A0A453LQQ1_AEGTS (Uncharacterized protein n=2 Tax=Triticinae TaxID=1648030 RepID=A0A453LQQ1_AEGTS) HSP 1 Score: 155 bits (392), Expect = 2.920e-43 Identity = 80/160 (50.00%), Postives = 99/160 (61.88%), Query Frame = 1
Query: 1 PQNSFLIATKTPSGQVCVYDYALHPSEPPEDAEEANPQLRLRGHTREGYGLDWNKTHEGRLLSGADDKRICVWDTNGHGSXXXXXXXXXXXXXXAVLDPLHVFEGHTDVVEDVAWSPFQSHVFGSVSDDKRLLLWDVRSG--DKPVKETVAHAGEANALS 474
PQNSF+IATKT S +V V+DY+ HPS+PP D NP LRL+GH EGYGL W+ EG LLSG+DD +IC+WD +G LD +F+ H VVEDVAW ++FGSV DD LL+WD+RS KPV+ VAH GE N L+
Sbjct: 2 PQNSFIIATKTVSAEVYVFDYSKHPSKPPLDGA-CNPDLRLKGHNSEGYGLSWSIFKEGHLLSGSDDAQICLWDITANGKNK-------------TLDAYQIFKFHDGVVEDVAWHLRHEYLFGSVGDDHHLLIWDMRSPAPTKPVQSVVAHQGEVNCLA 147
BLAST of mRNA_M-pyrifera_M_contig111839.2476.1 vs. uniprot
Match: UPI001C4C3D16 (WD-40 repeat-containing protein MSI1-like n=2 Tax=Zingiber officinale TaxID=94328 RepID=UPI001C4C3D16) HSP 1 Score: 158 bits (399), Expect = 4.250e-43 Identity = 81/159 (50.94%), Postives = 100/159 (62.89%), Query Frame = 1
Query: 1 PQNSFLIATKTPSGQVCVYDYALHPSEPPEDAEEANPQLRLRGHTREGYGLDWNKTHEGRLLSGADDKRICVWDTNGHGSXXXXXXXXXXXXXXAVLDPLHVFEGHTDVVEDVAWSPFQSHVFGSVSDDKRLLLWDVRS-GDKPVKETVAHAGEANALS 474
PQN+F+IATKT S +V V+DY+ HPS+PP D NP LRLRGH EGYGL W++ +G LLSG+DD +IC+WD N LD L +F+ H VVEDVAW + FGSV DD LLLWD+R+ +KPVK VAH GE N L+
Sbjct: 135 PQNTFIIATKTVSAEVYVFDYSKHPSKPPLDGA-CNPDLRLRGHNSEGYGLSWSQFKQGHLLSGSDDAQICLWDINA-------------APKNKTLDALQIFKVHDGVVEDVAWHLRHEYYFGSVGDDHYLLLWDLRTTNNKPVKSVVAHQGEVNCLA 279
BLAST of mRNA_M-pyrifera_M_contig111839.2476.1 vs. uniprot
Match: A0A444ECT7_ENSVE (Uncharacterized protein n=1 Tax=Ensete ventricosum TaxID=4639 RepID=A0A444ECT7_ENSVE) HSP 1 Score: 153 bits (386), Expect = 7.910e-43 Identity = 79/159 (49.69%), Postives = 97/159 (61.01%), Query Frame = 1
Query: 1 PQNSFLIATKTPSGQVCVYDYALHPSEPPEDAEEANPQLRLRGHTREGYGLDWNKTHEGRLLSGADDKRICVWDTNGHGSXXXXXXXXXXXXXXAVLDPLHVFEGHTDVVEDVAWSPFQSHVFGSVSDDKRLLLWDVRSGD-KPVKETVAHAGEANALS 474
PQN F+IATKT S +V V+DY+ HPS+PP D NP L+LRGH EGYGL W++ +G LLSG+DD +IC+WD N LD L F+ H VVEDVAW + FGSV DD LLLWD+R + KPVK +AH GE N L+
Sbjct: 2 PQNPFIIATKTVSAEVYVFDYSKHPSKPPLDGA-CNPDLKLRGHNSEGYGLSWSQFKQGHLLSGSDDAQICLWDINS-------------TPKNKALDALQTFKVHDGVVEDVAWHLRHEYYFGSVGDDHYLLLWDLRMPNTKPVKSVIAHQGEVNCLA 146
BLAST of mRNA_M-pyrifera_M_contig111839.2476.1 vs. uniprot
Match: UPI00053AAEA1 (histone-binding protein MSI1 isoform X2 n=1 Tax=Camelina sativa TaxID=90675 RepID=UPI00053AAEA1) HSP 1 Score: 156 bits (394), Expect = 1.140e-42 Identity = 79/160 (49.38%), Postives = 100/160 (62.50%), Query Frame = 1
Query: 1 PQNSFLIATKTPSGQVCVYDYALHPSEPPEDAEEANPQLRLRGHTREGYGLDWNKTHEGRLLSGADDKRICVWDTNGHGSXXXXXXXXXXXXXXAVLDPLHVFEGHTDVVEDVAWSPFQSHVFGSVSDDKRLLLWDVRS--GDKPVKETVAHAGEANALS 474
PQN F+IATKT + +V V+DY+ HPS+PP D NP LRLRGH+ EGYGL W+K +G LLSG+DD +IC+WD N LD +F+ H VVEDVAW H+FGSV DD+ LL+WD+RS KPV+ VAH+ E N L+
Sbjct: 135 PQNPFMIATKTVNAEVYVFDYSKHPSKPPLDGA-CNPDLRLRGHSSEGYGLSWSKFKQGHLLSGSDDAQICLWDINA-------------TPKNRTLDAQQIFKAHEGVVEDVAWHLRHEHLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLA 280
BLAST of mRNA_M-pyrifera_M_contig111839.2476.1 vs. uniprot
Match: A0A7J9FLD6_9ROSI (Uncharacterized protein n=1 Tax=Gossypium trilobum TaxID=34281 RepID=A0A7J9FLD6_9ROSI) HSP 1 Score: 155 bits (391), Expect = 1.140e-42 Identity = 79/160 (49.38%), Postives = 101/160 (63.12%), Query Frame = 1
Query: 1 PQNSFLIATKTPSGQVCVYDYALHPSEPPEDAEEANPQLRLRGHTREGYGLDWNKTHEGRLLSGADDKRICVWDTNGHGSXXXXXXXXXXXXXXAVLDPLHVFEGHTDVVEDVAWSPFQSHVFGSVSDDKRLLLWDVR--SGDKPVKETVAHAGEANALS 474
PQNSF+IATKT S +V V+DY+ HPS+PP D +P LRLRGH+ EGYGL W+K EG LLSG+DD +IC+WD N LD + +F+ H VVEDVAW ++FGSV DD+ LL+WD+R S KP++ VAH E N L+
Sbjct: 52 PQNSFIIATKTVSAEVFVFDYSKHPSKPPLDGA-CSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINA-------------TPKNKALDAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVTKPIQSVVAHQSEVNCLA 197
BLAST of mRNA_M-pyrifera_M_contig111839.2476.1 vs. uniprot
Match: A0A833R4V8_9POAL (Multicopy suppressor of IRA1 n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833R4V8_9POAL) HSP 1 Score: 157 bits (396), Expect = 1.220e-42 Identity = 79/159 (49.69%), Postives = 101/159 (63.52%), Query Frame = 1
Query: 1 PQNSFLIATKTPSGQVCVYDYALHPSEPPEDAEEANPQLRLRGHTREGYGLDWNKTHEGRLLSGADDKRICVWDTNGHGSXXXXXXXXXXXXXXAVLDPLHVFEGHTDVVEDVAWSPFQSHVFGSVSDDKRLLLWDVRS-GDKPVKETVAHAGEANALS 474
PQN F+IATKT S +V V+DY+ HPS+PP D NP LRLRGH+ EGYGL W+ +G LLSG+DD +IC+WD G+ LD L +F+ H VVEDVAW ++FGSV DD LL+WD+RS +PV++ VAH GE N L+
Sbjct: 135 PQNQFIIATKTVSAEVYVFDYSKHPSKPPLDGT-CNPDLRLRGHSSEGYGLSWSVFKDGHLLSGSDDAQICMWDIKGNSKNK-------------TLDALQIFKYHEGVVEDVAWHLRHEYLFGSVGDDHHLLIWDLRSRSQQPVEKVVAHQGEVNCLA 279
BLAST of mRNA_M-pyrifera_M_contig111839.2476.1 vs. uniprot
Match: A0A6J0MP30_RAPSA (histone-binding protein MSI1-like n=1 Tax=Raphanus sativus TaxID=3726 RepID=A0A6J0MP30_RAPSA) HSP 1 Score: 153 bits (387), Expect = 2.260e-42 Identity = 77/160 (48.12%), Postives = 100/160 (62.50%), Query Frame = 1
Query: 1 PQNSFLIATKTPSGQVCVYDYALHPSEPPEDAEEANPQLRLRGHTREGYGLDWNKTHEGRLLSGADDKRICVWDTNGHGSXXXXXXXXXXXXXXAVLDPLHVFEGHTDVVEDVAWSPFQSHVFGSVSDDKRLLLWDVRS--GDKPVKETVAHAGEANALS 474
PQN F+IATKT + +V V+DY+ HPS+PP D NP LRLRGH+ EGYGL W+K G LLSG+DD +IC+WD N V+D +F+ H VVEDVAW ++FGSV DD+ LL+WD+RS KP++ VAH+ E N L+
Sbjct: 23 PQNPFVIATKTVNAEVYVFDYSKHPSKPPLDGA-CNPDLRLRGHSSEGYGLSWSKFKPGHLLSGSDDAQICLWDINA-------------TPKNKVIDAQQIFKAHEGVVEDVAWHMSHEYLFGSVGDDQYLLIWDLRSPSASKPIQSVVAHSMEVNCLA 168
BLAST of mRNA_M-pyrifera_M_contig111839.2476.1 vs. uniprot
Match: A0A814BMB1_9BILA (Hypothetical protein n=1 Tax=Brachionus calyciflorus TaxID=104777 RepID=A0A814BMB1_9BILA) HSP 1 Score: 156 bits (394), Expect = 2.310e-42 Identity = 78/160 (48.75%), Postives = 99/160 (61.88%), Query Frame = 1
Query: 1 PQNSFLIATKTPSGQVCVYDYALHPSEPPEDAEEANPQLRLRGHTREGYGLDWNKTHEGRLLSGADDKRICVWDTNGHGSXXXXXXXXXXXXXXAVLDPLHVFEGHTDVVEDVAWSPFQSHVFGSVSDDKRLLLWDVRS--GDKPVKETVAHAGEANALS 474
PQN +IATKTPS V ++DY HPS+P + + E NP+LRL+GHT+EGYGL WN G LLS +DD IC+W+ N + + LD L +F GHT VVEDVAW +FGSV DDK+L+LWD RS +KP + AH+ E N LS
Sbjct: 133 PQNQCIIATKTPSSDVLIFDYTKHPSKP-DPSGECNPELRLKGHTKEGYGLSWNPNVNGHLLSASDDHTICLWNINANPTNK-------------ALDALSIFTGHTAVVEDVAWHLLHDSIFGSVGDDKKLMLWDTRSTGANKPTQIIDAHSAEVNCLS 278
BLAST of mRNA_M-pyrifera_M_contig111839.2476.1 vs. uniprot
Match: A0A6A1WKQ8_9ROSI (WD-40 repeat-containing protein MSI1 n=1 Tax=Morella rubra TaxID=262757 RepID=A0A6A1WKQ8_9ROSI) HSP 1 Score: 155 bits (391), Expect = 2.560e-42 Identity = 78/158 (49.37%), Postives = 100/158 (63.29%), Query Frame = 1
Query: 1 PQNSFLIATKTPSGQVCVYDYALHPSEPPEDAEEANPQLRLRGHTREGYGLDWNKTHEGRLLSGADDKRICVWDTNGHGSXXXXXXXXXXXXXXAVLDPLHVFEGHTDVVEDVAWSPFQSHVFGSVSDDKRLLLWDVR--SGDKPVKETVAHAGEANA 468
PQNSF+IATKT S +V V+DY+ HPS+PP D +P LRLRGH+ EGYGL W+K +G LLSG+DD +IC+WD N LD + +F+ H VVEDVAW H+FGSV DD+ LL+WD+R S KPV+ +AH E+ A
Sbjct: 135 PQNSFIIATKTVSAEVYVFDYSKHPSKPPLDGA-CSPDLRLRGHSTEGYGLSWSKFKQGHLLSGSDDAQICLWDINS-------------TPKNKTLDAMQIFKVHEGVVEDVAWHLRHEHLFGSVGDDQHLLIWDLRTSSASKPVQSVIAHQSESVA 278
BLAST of mRNA_M-pyrifera_M_contig111839.2476.1 vs. uniprot
Match: A0A453LR20_AEGTS (CAF1C_H4-bd domain-containing protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453LR20_AEGTS) HSP 1 Score: 155 bits (392), Expect = 2.830e-42 Identity = 80/160 (50.00%), Postives = 99/160 (61.88%), Query Frame = 1
Query: 1 PQNSFLIATKTPSGQVCVYDYALHPSEPPEDAEEANPQLRLRGHTREGYGLDWNKTHEGRLLSGADDKRICVWDTNGHGSXXXXXXXXXXXXXXAVLDPLHVFEGHTDVVEDVAWSPFQSHVFGSVSDDKRLLLWDVRSG--DKPVKETVAHAGEANALS 474
PQNSF+IATKT S +V V+DY+ HPS+PP D NP LRL+GH EGYGL W+ EG LLSG+DD +IC+WD +G LD +F+ H VVEDVAW ++FGSV DD LL+WD+RS KPV+ VAH GE N L+
Sbjct: 131 PQNSFIIATKTVSAEVYVFDYSKHPSKPPLDGA-CNPDLRLKGHNSEGYGLSWSIFKEGHLLSGSDDAQICLWDITANGKNK-------------TLDAYQIFKFHDGVVEDVAWHLRHEYLFGSVGDDHHLLIWDMRSPAPTKPVQSVVAHQGEVNCLA 276 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig111839.2476.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig111839.2476.1 >prot_M-pyrifera_M_contig111839.2476.1 ID=prot_M-pyrifera_M_contig111839.2476.1|Name=mRNA_M-pyrifera_M_contig111839.2476.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=196bp PQNSFLIATKTPSGQVCVYDYALHPSEPPEDAEEANPQLRLRGHTREGYGback to top mRNA from alignment at M-pyrifera_M_contig111839:2..589- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig111839.2476.1 ID=mRNA_M-pyrifera_M_contig111839.2476.1|Name=mRNA_M-pyrifera_M_contig111839.2476.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=588bp|location=Sequence derived from alignment at M-pyrifera_M_contig111839:2..589- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig111839:2..589- >mRNA_M-pyrifera_M_contig111839.2476.1 ID=mRNA_M-pyrifera_M_contig111839.2476.1|Name=mRNA_M-pyrifera_M_contig111839.2476.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1176bp|location=Sequence derived from alignment at M-pyrifera_M_contig111839:2..589- (Macrocystis pyrifera P11B4 male)back to top |