mRNA_M-pyrifera_M_contig111809.2467.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig111809.2467.1 vs. uniprot
Match: A0A7X2E526_BACTU (MBL fold metallo-hydrolase n=3 Tax=Bacillus cereus group TaxID=86661 RepID=A0A7X2E526_BACTU) HSP 1 Score: 155 bits (392), Expect = 2.630e-43 Identity = 78/185 (42.16%), Postives = 110/185 (59.46%), Query Frame = 1
Query: 4 VLGEVRRLTDKPIAWLVCTHFHPEHNFGAQAFPDTTKVIYATAQHRDLAEKGEHYRSWFVEMFADDVAALLAPVVLRNPDLTFERRAVVDLGGRPVELLHFGRAAHTRGDTLVFVPDAGIVFAGGLTPNGKFPIMPDADSDGNGWIETLSELRELDITRIVPGHGAVADPALIDTIDTYLRALRD 558
V+ EVR++TDK + THFHPEHNFGAQ F + + +IY Q +L KG Y F + F +D+A L V L P LT++ A +DLGG V+L F R AHTRGD ++F+P+ ++F G L N F I PD D+ G+ WI+ L L++ +VPGHG + + +LI YL L++
Sbjct: 76 VMKEVRKITDKKRMFFTTTHFHPEHNFGAQFFANESVIIYNQEQKLELLNKGPEYIELF-KGFGEDIAEFLEDVQLVMPSLTYKESAEIDLGGITVQL--FSRPAHTRGDQVIFLPEQRVLFCGDLVENRFFSIFPDEDAKGSAWIDVLENLQKFHADIVVPGHGEIGNNSLISECQGYLLKLKE 257
BLAST of mRNA_M-pyrifera_M_contig111809.2467.1 vs. uniprot
Match: A0A853BKJ7_9ACTN (Glyoxylase-like metal-dependent hydrolase (Beta-lactamase superfamily II) n=2 Tax=Streptomonospora TaxID=104204 RepID=A0A853BKJ7_9ACTN) HSP 1 Score: 144 bits (362), Expect = 8.480e-39 Identity = 83/176 (47.16%), Postives = 100/176 (56.82%), Query Frame = 1
Query: 46 WLVCTHFHPEHNFGAQAFPDTTKVIYATAQHRDLAEKGEHYRSWFVEMFADDVAALLAPVVLRNPDLTFERRAVVDLGGRPVELLHFGRAAHTRGDTLVFVPDAGIVFAGGLTPNGKFPIMP-----DADSDGNGWIETLSELRELDITRIVPGHGAVADPALIDTIDTYLRALRD 558
+L THFHPEH FGA+AF + AQ DLA KG Y F + D VA L+ V L PD+ +E A +DLGGR V L GRA H+RGD +V VPDAG+VF G L G+FPI+P D D G GWI L L + +VPGHGAV P L+ + LR LRD
Sbjct: 75 YLTTTHFHPEHAFGARAFAGRAVYLANRAQAADLAAKGPGYLDMFRGL-GDHVARRLSGVDLPAPDVVYEESAELDLGGRVVRLRAVGRA-HSRGDQVVEVPDAGVVFTGDLVEAGQFPILPWFPPHDTDVSGTGWIAALRRLAAEEPRTVVPGHGAVGGPDLLADAEGCLRLLRD 248
BLAST of mRNA_M-pyrifera_M_contig111809.2467.1 vs. uniprot
Match: UPI00189241CD (MBL fold metallo-hydrolase n=1 Tax=Catenulispora rubra TaxID=280293 RepID=UPI00189241CD) HSP 1 Score: 140 bits (352), Expect = 2.380e-37 Identity = 79/176 (44.89%), Postives = 99/176 (56.25%), Query Frame = 1
Query: 46 WLVCTHFHPEHNFGAQAFPDTTKVIYATAQHRDLAEKGEHYRSWFVEMFADDVAALLAPVVLRNPDLTFERRAVVDLGGRPVELLHFGRAAHTRGDTLVFVPDAGIVFAGGLTPNGKFPIMP-----DADSDGNGWIETLSELRELDITRIVPGHGAVADPALIDTIDTYLRALRD 558
+L THFHPEH FGAQAF D + AQ DL++KG Y + F ++ A VA L L PD+ F+ +DLGGR V L GRA H+RGD +V VPDAG++F G L G+F I P D D G WI + L +VPGHGA+ D AL+ + YLR LRD
Sbjct: 75 YLTTTHFHPEHAFGAQAFADEATYVVNRAQADDLSQKGAGYLAMFTQLGAP-VARELDGTELPTPDVVFDDGYALDLGGRTVHLRPTGRA-HSRGDQIVTVPDAGVLFTGDLAEAGQFAIFPWFPPHDTDVSGLRWIRVMEGLAAEQHRVVVPGHGAIGDAALLAEVRDYLRELRD 248
BLAST of mRNA_M-pyrifera_M_contig111809.2467.1 vs. uniprot
Match: UPI001AEDCA41 (MBL fold metallo-hydrolase n=1 Tax=Pseudaminobacter soli TaxID=2831468 RepID=UPI001AEDCA41) HSP 1 Score: 139 bits (350), Expect = 3.910e-37 Identity = 80/175 (45.71%), Postives = 98/175 (56.00%), Query Frame = 1
Query: 49 LVCTHFHPEHNFGAQAFPDTTKVIYATAQHRDLAEKGEHYRSWFVEMFADDVAALLAPVVLRNPDLTF-ERRAVVDLGGRPVELLHFGRAAHTRGDTLVFVPDAGIVFAGGLTPNGKFPIMP-----DADSDGNGWIETLSELRELDITRIVPGHGAVADPALIDTIDTYLRALR 555
L THFHPEH FGAQ F ++Y TAQ +LA KGE Y S F F VAA L +VL +PD T+ E +DLGGR VEL FG AHTRGD +V VPDA +VF G L FPI P DAD D + W L +L +VPGHG+V ++ + Y+ L+
Sbjct: 77 LTLTHFHPEHGFGAQEFKGRATILYNTAQRDELAAKGEAYLSMF-RTFGPGVAAALEDIVLVDPDETYAEATKRLDLGGRVVELSTFG-LAHTRGDQVVTVPDAKVVFTGDLAEERIFPIFPWFPPGDADLDADNWARVLEDLEATRPAIVVPGHGSVGGAEILHQVRYYILDLK 249
BLAST of mRNA_M-pyrifera_M_contig111809.2467.1 vs. uniprot
Match: UPI00036E7FA7 (MBL fold metallo-hydrolase n=1 Tax=Amycolatopsis benzoatilytica TaxID=346045 RepID=UPI00036E7FA7) HSP 1 Score: 139 bits (349), Expect = 5.380e-37 Identity = 80/176 (45.45%), Postives = 97/176 (55.11%), Query Frame = 1
Query: 46 WLVCTHFHPEHNFGAQAFPDTTKVIYATAQHRDLAEKGEHYRSWFVEMFADDVAALLAPVVLRNPDLTFERRAVVDLGGRPVELLHFGRAAHTRGDTLVFVPDAGIVFAGGLTPNGKFPIMP-----DADSDGNGWIETLSELRELDITRIVPGHGAVADPALIDTIDTYLRALRD 558
+L THFHPEH FGAQ F + AQ DLAEKG Y F + + VA L V L PD+ ++ +DLGGR VEL GRA H+RGD +V VPD+G++F G L G+F I P D D G WIE L L +VPGHGAV P L+D + YL LRD
Sbjct: 75 YLTTTHFHPEHAFGAQTFAGPATYLVNRAQAVDLAEKGPGYLRMFAGL-GEPVARQLEGVQLAEPDVVYDESYDLDLGGRVVELRATGRA-HSRGDQVVTVPDSGVLFTGDLAEAGQFAIFPWFPPHDTDVSGIRWIEVLRRLSGQRSEIVVPGHGAVRGPELLDELRGYLEVLRD 248
BLAST of mRNA_M-pyrifera_M_contig111809.2467.1 vs. uniprot
Match: UPI0017BC4686 (MBL fold metallo-hydrolase n=1 Tax=Saccharothrix sp. TaxID=1873460 RepID=UPI0017BC4686) HSP 1 Score: 137 bits (346), Expect = 1.540e-36 Identity = 79/176 (44.89%), Postives = 94/176 (53.41%), Query Frame = 1
Query: 46 WLVCTHFHPEHNFGAQAFPDTTKVIYATAQHRDLAEKGEHYRSWFVEMFADDVAALLAPVVLRNPDLTFERRAVVDLGGRPVELLHFGRAAHTRGDTLVFVPDAGIVFAGGLTPNGKFPIMP-----DADSDGNGWIETLSELRELDITRIVPGHGAVADPALIDTIDTYLRALRD 558
+L THFHPEH FGAQ F D + Q DLA KG Y F + A+ VA L V L PDL +R +DLGGR V+L GR H+RGD +V VPDAG++F G L G F I P D D G GW+ L L +VPGHG V D L+ + YLR LRD
Sbjct: 75 YLTTTHFHPEHAFGAQVFADEATYLVNRDQADDLARKGPGYLEMFRGL-AESVARRLVDVELVRPDLVHDRDHDLDLGGRVVQLHATGRG-HSRGDQVVRVPDAGVLFTGDLVEAGGFAIFPWFPPHDTDVSGTGWLAVLERLAATGARTVVPGHGEVGDARLLAEVRDYLRLLRD 248
BLAST of mRNA_M-pyrifera_M_contig111809.2467.1 vs. uniprot
Match: UPI001C069F1A (MBL fold metallo-hydrolase n=1 Tax=Nocardia albiluteola TaxID=2842303 RepID=UPI001C069F1A) HSP 1 Score: 137 bits (345), Expect = 2.550e-36 Identity = 77/176 (43.75%), Postives = 96/176 (54.55%), Query Frame = 1
Query: 46 WLVCTHFHPEHNFGAQAFPDTTKVIYATAQHRDLAEKGEHYRSWFVEMFADDVAALLAPVVLRNPDLTFERRAVVDLGGRPVELLHFGRAAHTRGDTLVFVPDAGIVFAGGLTPNGKFPIMP-----DADSDGNGWIETLSELRELDITRIVPGHGAVADPALIDTIDTYLRALRD 558
+L THFHPEH FGAQ F + AQ DLA KGE Y + F ++ + +A L V L PD +E +DLGGR VEL GRA H+RGD +V VPDAG++F G L G+F I P D D G WI + L +VPGHGA+ D L+ + YL LRD
Sbjct: 75 YLTTTHFHPEHAFGAQVFAGEATYLINRAQADDLAHKGESYLAMFSQL-GEPIARQLEDVTLTTPDQVYEGAYELDLGGRTVELRPTGRA-HSRGDQVVAVPDAGVLFTGDLAEAGQFAIFPWFPPYDTDVSGLRWISVMERLAAEPARVVVPGHGAIGDGRLLADVRDYLCELRD 248
BLAST of mRNA_M-pyrifera_M_contig111809.2467.1 vs. uniprot
Match: UPI001AAF1E31 (MBL fold metallo-hydrolase n=1 Tax=Actinomadura violacea TaxID=2819934 RepID=UPI001AAF1E31) HSP 1 Score: 136 bits (342), Expect = 6.800e-36 Identity = 79/176 (44.89%), Postives = 96/176 (54.55%), Query Frame = 1
Query: 46 WLVCTHFHPEHNFGAQAFPDTTKVIYATAQHRDLAEKGEHYRSWFVEMFADDVAALLAPVVLRNPDLTFERRAVVDLGGRPVELLHFGRAAHTRGDTLVFVPDAGIVFAGGLTPNGKFPIMP-----DADSDGNGWIETLSELRELDITRIVPGHGAVADPALIDTIDTYLRALRD 558
+L THFHPEH FGAQAF + AQ DLA KG+ Y F + A VA L V LR PD+ ++ +DLGGR V L GRA H+RGD +V VPDAG++F G L G+F I P D D G WI + L E +VPGHG V P L+ + YL LRD
Sbjct: 75 YLTTTHFHPEHAFGAQAFAGEATYLVNRAQAEDLAAKGDGYLHMFRGLGAP-VARQLEGVALRAPDVVYDAAHDLDLGGRVVRLRATGRA-HSRGDQVVTVPDAGVMFTGDLAEAGQFAIFPWFPPHDTDVSGTRWIAVMRRLAEQAPRVVVPGHGDVGGPGLLADVRDYLELLRD 248
BLAST of mRNA_M-pyrifera_M_contig111809.2467.1 vs. uniprot
Match: A0A0K3B4R7_9PSEU (Fumarylacetoacetase n=2 Tax=Kibdelosporangium sp. MJ126-NF4 TaxID=703222 RepID=A0A0K3B4R7_9PSEU) HSP 1 Score: 137 bits (344), Expect = 7.740e-36 Identity = 77/176 (43.75%), Postives = 100/176 (56.82%), Query Frame = 1
Query: 46 WLVCTHFHPEHNFGAQAFPDTTKVIYATAQHRDLAEKGEHYRSWFVEMFADDVAALLAPVVLRNPDLTFERRAVVDLGGRPVELLHFGRAAHTRGDTLVFVPDAGIVFAGGLTPNGKFPIMP-----DADSDGNGWIETLSELRELDITRIVPGHGAVADPALIDTIDTYLRALRD 558
+L THFHPEH FGAQ+F + AQ DLA KG Y F + A +A L V L PD+ ++ +DLGGR V + GRA H++GD +V VPDAG++F G LT G+F I P DAD G WIE ++ L D +VPGHG V+ P L+ + YL +LRD
Sbjct: 116 YLTTTHFHPEHAFGAQSFTGEATYLVNAAQAADLATKGPGYLDMFRGLGAP-IARQLEGVELVKPDMVYDDTHDLDLGGRTVRMSATGRA-HSKGDQVVTVPDAGVLFTGDLTEAGQFSIFPWFPPYDADVSGLRWIEVMNRLISTDPRVVVPGHGDVSGPGLLTDVRDYLESLRD 289
BLAST of mRNA_M-pyrifera_M_contig111809.2467.1 vs. uniprot
Match: A0A0N1NPM1_9ACTN (Beta-lactamase domain protein n=1 Tax=Actinobacteria bacterium OK074 TaxID=1592327 RepID=A0A0N1NPM1_9ACTN) HSP 1 Score: 135 bits (340), Expect = 1.620e-35 Identity = 81/190 (42.63%), Postives = 99/190 (52.11%), Query Frame = 1
Query: 4 VLGEVRRLTDKPIAWLVCTHFHPEHNFGAQAFPDTTKVIYATAQHRDLAEKGEHYRSWFVEMFADDVAALLAPVVLRNPDLTFERRAVVDLGGRPVELLHFGRAAHTRGDTLVFVPDAGIVFAGGLTPNGKFPIMP-----DADSDGNGWIETLSELRELDITRIVPGHGAVADPALIDTIDTYLRALRD 558
VLG RRL + +L THFHPEH FGAQ F ++Y TAQ +L KG + F F +AA L V L +PD+T++ RA +DLGGR L G AHT GD +V V D ++F G L FP P D D D WI L EL L +VPGHG V D LI + YL +RD
Sbjct: 73 VLGWARRLAGERPLYLTLTHFHPEHGFGAQEFKGAATIVYNTAQRDELRRKGPAFLDMF-RGFGPGIAAELEGVELVDPDVTYDGRAELDLGGRTAVLRAVG-PAHTVGDQVVLVDDR-VLFGGDLLETRMFPFTPYFPPFDTDGDPARWITVLDELSALGPEIVVPGHGEVTDAGLIQEVHDYLAHVRD 259 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig111809.2467.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig111809.2467.1 >prot_M-pyrifera_M_contig111809.2467.1 ID=prot_M-pyrifera_M_contig111809.2467.1|Name=mRNA_M-pyrifera_M_contig111809.2467.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=188bp TVLGEVRRLTDKPIAWLVCTHFHPEHNFGAQAFPDTTKVIYATAQHRDLAback to top mRNA from alignment at M-pyrifera_M_contig111809:25..588- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig111809.2467.1 ID=mRNA_M-pyrifera_M_contig111809.2467.1|Name=mRNA_M-pyrifera_M_contig111809.2467.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=564bp|location=Sequence derived from alignment at M-pyrifera_M_contig111809:25..588- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig111809:25..588- >mRNA_M-pyrifera_M_contig111809.2467.1 ID=mRNA_M-pyrifera_M_contig111809.2467.1|Name=mRNA_M-pyrifera_M_contig111809.2467.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1128bp|location=Sequence derived from alignment at M-pyrifera_M_contig111809:25..588- (Macrocystis pyrifera P11B4 male)back to top |