mRNA_M-pyrifera_M_contig111798.2465.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig111798.2465.1
Unique NamemRNA_M-pyrifera_M_contig111798.2465.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig111798.2465.1 vs. uniprot
Match: A6CFV0_9PLAN (Uncharacterized protein n=8 Tax=Planctomycetaceae TaxID=126 RepID=A6CFV0_9PLAN)

HSP 1 Score: 375 bits (964), Expect = 2.410e-128
Identity = 182/195 (93.33%), Postives = 187/195 (95.90%), Query Frame = 1
Query:    1 IAGYPTDVYGKGSKYNIGPLGVAFMDKDHLVVGDGSRPDGEELVRIYKVGDKPLAKWVKEDTAAQTLGPIKAGDKSAKGEGNFYGVAFGDGAIFVTCNGDDTKGWVAKSVVKDGKAGPLEPSIETKTATNVDAPAAITFTLDGKELVVGQMGEVNVAGDSLLTFYDPKTGKLTKSLKTGLSDIAGLAYSPKTKKL 585
            IAGYPTDVYGKG KYNIGPLGVAFMDKDHLVVGDGSRPD EELVRIYKVGDKPL KWVKEDTA QTLGPIKAGDKSAKGEGNFYGVA GDGAI++TCNGDDTKGWVAKSV+KDGKAGPLEPSI TK ATNVDAP AITF+LDGKELV+GQMGEVNVAGDSLLTFYDPKTGKLTKSLKTGLSDIAGLAYSPKTKKL
Sbjct:  138 IAGYPTDVYGKGPKYNIGPLGVAFMDKDHLVVGDGSRPDAEELVRIYKVGDKPLEKWVKEDTAVQTLGPIKAGDKSAKGEGNFYGVAVGDGAIYITCNGDDTKGWVAKSVIKDGKAGPLEPSIATKEATNVDAPVAITFSLDGKELVIGQMGEVNVAGDSLLTFYDPKTGKLTKSLKTGLSDIAGLAYSPKTKKL 332          
BLAST of mRNA_M-pyrifera_M_contig111798.2465.1 vs. uniprot
Match: A0A518AFB1_9PLAN (Uncharacterized protein n=8 Tax=Gimesia TaxID=1649453 RepID=A0A518AFB1_9PLAN)

HSP 1 Score: 374 bits (959), Expect = 1.300e-127
Identity = 183/195 (93.85%), Postives = 187/195 (95.90%), Query Frame = 1
Query:    1 IAGYPTDVYGKGSKYNIGPLGVAFMDKDHLVVGDGSRPDGEELVRIYKVGDKPLAKWVKEDTAAQTLGPIKAGDKSAKGEGNFYGVAFGDGAIFVTCNGDDTKGWVAKSVVKDGKAGPLEPSIETKTATNVDAPAAITFTLDGKELVVGQMGEVNVAGDSLLTFYDPKTGKLTKSLKTGLSDIAGLAYSPKTKKL 585
            I  YPTD+YGKG KYNIGPLG+ FM KD LV+GDGSRPDGEELVRIYKVGDKPL KWVKEDTAAQTLGPIKAGDKSAKGEGNFYGVAFG GAI+VTCNGDDTKGWVAKSVVKDGKAGPLEPSIETKTATNVDAPAAITFTLDGKELVVGQMGEVNVAGDSLLTFYDPKTGKLTKSLKTGLSDIAGLAYSPKTKKL
Sbjct:  136 IDAYPTDIYGKGPKYNIGPLGLTFMSKDMLVIGDGSRPDGEELVRIYKVGDKPLEKWVKEDTAAQTLGPIKAGDKSAKGEGNFYGVAFGAGAIYVTCNGDDTKGWVAKSVVKDGKAGPLEPSIETKTATNVDAPAAITFTLDGKELVVGQMGEVNVAGDSLLTFYDPKTGKLTKSLKTGLSDIAGLAYSPKTKKL 330          
BLAST of mRNA_M-pyrifera_M_contig111798.2465.1 vs. uniprot
Match: A0A517VQ26_9PLAN (NHL repeat protein n=3 Tax=Gimesia TaxID=1649453 RepID=A0A517VQ26_9PLAN)

HSP 1 Score: 350 bits (897), Expect = 2.750e-118
Identity = 170/195 (87.18%), Postives = 181/195 (92.82%), Query Frame = 1
Query:    1 IAGYPTDVYGKGSKYNIGPLGVAFMDKDHLVVGDGSRPDGEELVRIYKVGDKPLAKWVKEDTAAQTLGPIKAGDKSAKGEGNFYGVAFGDGAIFVTCNGDDTKGWVAKSVVKDGKAGPLEPSIETKTATNVDAPAAITFTLDGKELVVGQMGEVNVAGDSLLTFYDPKTGKLTKSLKTGLSDIAGLAYSPKTKKL 585
            IAGYPTDVYGKG KYNIGPLG+AF++KDHLVVGDGSRPDG ELVRIYKVGDKPLAKWVKED+AAQTLGPIKAGDK+AKGEGNFYGVA G G IFVTCNGDDTKGWVAKSVVKDGKAGPLE +I TK ATNVDAP AITF+ DGK+LV+GQMGE+NV  D+LLTFYDP TGKL KSLKTGLSDIAGLAYSPKTKKL
Sbjct:  130 IAGYPTDVYGKGPKYNIGPLGLAFLNKDHLVVGDGSRPDGSELVRIYKVGDKPLAKWVKEDSAAQTLGPIKAGDKTAKGEGNFYGVAVGGGNIFVTCNGDDTKGWVAKSVVKDGKAGPLELTIATKEATNVDAPVAITFSPDGKQLVIGQMGEMNVPNDALLTFYDPATGKLNKSLKTGLSDIAGLAYSPKTKKL 324          
BLAST of mRNA_M-pyrifera_M_contig111798.2465.1 vs. uniprot
Match: A0A3M1VLY8_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M1VLY8_9BACT)

HSP 1 Score: 274 bits (700), Expect = 2.010e-89
Identity = 139/195 (71.28%), Postives = 156/195 (80.00%), Query Frame = 1
Query:    1 IAGYPTDVYGKGSKYNIGPLGVAFMDKDHLVVGDGSRPDGEELVRIYKVGDKPLAKWVKEDTAAQTLGPIKAGDKSAKGEGNFYGVAFGDGAIFVTCNGDDTKGWVAKSVVKDGKAGPLEPSIETKTATNVDAPAAITFTLDGKELVVGQMGEVNVAGDSLLTFYDPKTGKLTKSLKTGLSDIAGLAYSPKTKKL 585
            I G+ TD+YGKG KY IGPLG+AF  KD LVVGDGSRPDGEELVRIYK+      + +KE  A  TLGPIKAG+KSA+GEGNFYGVA G GAIFVTCNGDDTKGWVAK+ +K G    LEP+I TK AT VDAP AITF+ DG +LV+GQMGE+ V GDSLLTFYDPKTGKL K  +TGLSDIAGLAY PKT +L
Sbjct:   59 IVGFGTDIYGKGPKYEIGPLGLAFWGKDKLVVGDGSRPDGEELVRIYKLPAGAPHEPLKETDAVYTLGPIKAGEKSARGEGNFYGVAVGAGAIFVTCNGDDTKGWVAKANIKGGTPEQLEPTIATKVATGVDAPVAITFSPDG-DLVIGQMGEMTVPGDSLLTFYDPKTGKLKKKFETGLSDIAGLAYHPKTGEL 252          
BLAST of mRNA_M-pyrifera_M_contig111798.2465.1 vs. uniprot
Match: A0A518CHR6_9PLAN (Uncharacterized protein n=1 Tax=Polystyrenella longa TaxID=2528007 RepID=A0A518CHR6_9PLAN)

HSP 1 Score: 268 bits (686), Expect = 4.000e-87
Identity = 131/195 (67.18%), Postives = 155/195 (79.49%), Query Frame = 1
Query:    1 IAGYPTDVYGKGSKYNIGPLGVAFMDKDHLVVGDGSRPDGEELVRIYKVGDKPLAKWVKEDTAAQTLGPIKAGDKSAKGEGNFYGVAFGDGAIFVTCNGDDTKGWVAKSVVKDGKAGPLEPSIETKTATNVDAPAAITFTLDGKELVVGQMGEVNVAGDSLLTFYDPKTGKLTKSLKTGLSDIAGLAYSPKTKKL 585
            ++G+PTDVYGKG KYNIGPLGV F+   H+VVGDGSRPDGEELVR+Y++  K  +    +  A  TLGPI  G+++AKGEGNFYGVA  + AIFVTCNGDDTKGWV+K+ + +GK G L+P I TK AT  DAP AITF+ DG ELVVGQMGE+NV  DSLLTFYDP TG+L +SLKT LSDIAGLAYSP+T KL
Sbjct:   74 VSGFPTDVYGKGPKYNIGPLGVGFLGDKHIVVGDGSRPDGEELVRVYELNGKKKS----DADAVYTLGPIVKGEQTAKGEGNFYGVAVNESAIFVTCNGDDTKGWVSKADIAEGKPGELKPFIATKEATGTDAPVAITFSPDGSELVVGQMGEMNVPSDSLLTFYDPATGELKRSLKTELSDIAGLAYSPETSKL 264          
BLAST of mRNA_M-pyrifera_M_contig111798.2465.1 vs. uniprot
Match: A0A3B9CVJ8_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3B9CVJ8_9PLAN)

HSP 1 Score: 268 bits (685), Expect = 5.490e-87
Identity = 134/195 (68.72%), Postives = 154/195 (78.97%), Query Frame = 1
Query:    1 IAGYPTDVYGKGSKYNIGPLGVAFMDKDHLVVGDGSRPDGEELVRIYKVGDKPLAKWVKEDTAAQTLGPIKAGDKSAKGEGNFYGVAFGDGAIFVTCNGDDTKGWVAKSVVKDGKAGPLEPSIETKTATNVDAPAAITFTLDGKELVVGQMGEVNVAGDSLLTFYDPKTGKLTKSLKTGLSDIAGLAYSPKTKKL 585
            I GY  DVYGKG KYNIGPLGVAF++ +HLVVGDGSRPDGEELVRI+K+  +  ++  KE  A QTLGPI   + + KGEGNFYGVA G GA+FVTCNGDDTKGWVAK+ +K GK G L+P I TK AT VDAP AIT + D K +VVGQ GEV V GD+LLTFYDP +GKL KS++TGLSDI GLAYSPKT KL
Sbjct:   74 IGGYGNDVYGKGPKYNIGPLGVAFLNGNHLVVGDGSRPDGEELVRIFKISTEEHSEQ-KETDAVQTLGPITKSELTVKGEGNFYGVAVGAGAVFVTCNGDDTKGWVAKAEIKGGKVGELKPFISTKEATEVDAPVAITVSPDAKSVVVGQGGEVGVPGDALLTFYDPASGKLQKSVETGLSDITGLAYSPKTGKL 267          
BLAST of mRNA_M-pyrifera_M_contig111798.2465.1 vs. uniprot
Match: A0A2E0SL03_9PLAN (Uncharacterized protein n=1 Tax=Planctomyces sp. TaxID=37635 RepID=A0A2E0SL03_9PLAN)

HSP 1 Score: 267 bits (682), Expect = 1.610e-86
Identity = 132/195 (67.69%), Postives = 154/195 (78.97%), Query Frame = 1
Query:    1 IAGYPTDVYGKGSKYNIGPLGVAFMDKDHLVVGDGSRPDGEELVRIYKVGDKPLAKWVKEDTAAQTLGPIKAGDKSAKGEGNFYGVAFGDGAIFVTCNGDDTKGWVAKSVVKDGKAGPLEPSIETKTATNVDAPAAITFTLDGKELVVGQMGEVNVAGDSLLTFYDPKTGKLTKSLKTGLSDIAGLAYSPKTKKL 585
            ++ +P D+YGKG KY+IGPLG+  ++ +HLVVGDGSRPDGEELVR+YK+  K  +    E  A  TLGPI AG+KSAKGEGNFYGVA  + AIFVTCNGDDTKGWV+K+ + DGK   L P I TK AT  DAP AITFT DG ELV+GQMGE+NVA DSLLTFYDP TG+L +SLKT LSDIAGLAYSP+T KL
Sbjct:   74 VSEFPEDIYGKGPKYDIGPLGLGLLNNEHLVVGDGSRPDGEELVRVYKLDGKKKS----EGDAVYTLGPITAGEKSAKGEGNFYGVAVNESAIFVTCNGDDTKGWVSKADIVDGKPQELVPFIATKEATGTDAPVAITFTPDGSELVIGQMGEMNVANDSLLTFYDPGTGELKRSLKTELSDIAGLAYSPQTGKL 264          
BLAST of mRNA_M-pyrifera_M_contig111798.2465.1 vs. uniprot
Match: A0A356AG30_9PLAN (Uncharacterized protein n=4 Tax=Planctomycetaceae TaxID=126 RepID=A0A356AG30_9PLAN)

HSP 1 Score: 258 bits (660), Expect = 5.310e-83
Identity = 129/195 (66.15%), Postives = 152/195 (77.95%), Query Frame = 1
Query:    1 IAGYPTDVYGKGSKYNIGPLGVAFMDKDHLVVGDGSRPDGEELVRIYKVGDKPLAKWVKEDTAAQTLGPIKAGDKSAKGEGNFYGVAFGDGAIFVTCNGDDTKGWVAKSVVKDGKAGPLEPSIETKTATNVDAPAAITFTLDGKELVVGQMGEVNVAGDSLLTFYDPKTGKLTKSLKTGLSDIAGLAYSPKTKKL 585
            I+ YPTDVYGKG KYNIGPLGV F+  DH+VVGDGSRPDGEELVR+YK+   P  + V ED+A  TLGPI+ G+ SAKGEGNFYGVA     IF+T NGDDTKGW+ K+ VK+GK   L+ +I TK AT VDAP AIT   +G E+VVGQMGE+NV GDSLLT Y+ K+G+L  S +TGLSDIAGLA+SPKT KL
Sbjct:   85 ISSYPTDVYGKGPKYNIGPLGVGFLGNDHIVVGDGSRPDGEELVRVYKISANPATQPVAEDSAEFTLGPIEQGEDSAKGEGNFYGVAVNKAGIFITANGDDTKGWILKAEVKNGKPQELKAAIATKVATGVDAPVAITNGENG-EIVVGQMGEMNVPGDSLLTVYNAKSGELLSSYETGLSDIAGLAFSPKTGKL 278          
BLAST of mRNA_M-pyrifera_M_contig111798.2465.1 vs. uniprot
Match: A0A3B1DTW0_9ZZZZ (Uncharacterized protein n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B1DTW0_9ZZZZ)

HSP 1 Score: 254 bits (649), Expect = 9.560e-81
Identity = 129/200 (64.50%), Postives = 149/200 (74.50%), Query Frame = 1
Query:    1 IAGYPTDVYGKGSKYNIGPLGVAFMDKDHLVVGDGSRPDGEELVRIYK-----VGDKPLAKWVKEDTAAQTLGPIKAGDKSAKGEGNFYGVAFGDGAIFVTCNGDDTKGWVAKSVVKDGKAGPLEPSIETKTATNVDAPAAITFTLDGKELVVGQMGEVNVAGDSLLTFYDPKTGKLTKSLKTGLSDIAGLAYSPKTKKL 585
            I  Y TDVYGKG +YNIGPLG+ F+DK+HLVV DGSR DGEELVRIYK     V +K   K+ KED+AA TLGPIKA +KS  GEGNF+GV  G G IFVTC+GDDTKGW+AKS  KDGK G LE  I TK    VDAP+AI  + DG++LVV QMGE+  AGDSLL  Y+PK GK+ K   TGL+DI GLA SPKTKK+
Sbjct:  114 IDNYATDVYGKGPRYNIGPLGLTFIDKNHLVVADGSRKDGEELVRIYKLTKGSVENKTKLKYAKEDSAAFTLGPIKASEKSKNGEGNFFGVTIGAGNIFVTCHGDDTKGWIAKSKFKDGKPGKLELFIATKEVLQVDAPSAIMMSADGEDLVVAQMGEITQAGDSLLVTYNPKDGKMRKKYTTGLNDIVGLAISPKTKKV 313          
BLAST of mRNA_M-pyrifera_M_contig111798.2465.1 vs. uniprot
Match: A0A3N5RFP4_9PLAN (Uncharacterized protein n=2 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3N5RFP4_9PLAN)

HSP 1 Score: 252 bits (644), Expect = 1.060e-80
Identity = 124/195 (63.59%), Postives = 144/195 (73.85%), Query Frame = 1
Query:    1 IAGYPTDVYGKGSKYNIGPLGVAFMDKDHLVVGDGSRPDGEELVRIYKVGDKPLAKWVKEDTAAQTLGPIKAGDKSAKGEGNFYGVAFGDGAIFVTCNGDDTKGWVAKSVVKDGKAGPLEPSIETKTATNVDAPAAITFTLDGKELVVGQMGEVNVAGDSLLTFYDPKTGKLTKSLKTGLSDIAGLAYSPKTKKL 585
            +  + TD+YGKG KY+IGPLGVA + ++HL+VGDGS  D EELVR++K+G  P       D AA  LGPI  GD SAKGEGNFY +A G  A +VT NGDDTKGW+ K  +KDGK G LEP I TK   NVDAP  IT + DGK+LVVGQMGEVN+AGDSLL FY+P  GKL KS  TGL+DIAGLAYSPKT KL
Sbjct:   75 VDAFKTDIYGKGPKYDIGPLGVALLGEEHLIVGDGSLQDAEELVRVFKIGANPPTTPTAADNAAFKLGPIGPGDASAKGEGNFYAIAVGPKAFYVTSNGDDTKGWILKCDIKDGKPGKLEPFIATKPLVNVDAPVGITLSPDGKQLVVGQMGEVNIAGDSLLCFYNPDDGKLLKSHATGLNDIAGLAYSPKTGKL 269          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig111798.2465.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A6CFV0_9PLAN2.410e-12893.33Uncharacterized protein n=8 Tax=Planctomycetaceae ... [more]
A0A518AFB1_9PLAN1.300e-12793.85Uncharacterized protein n=8 Tax=Gimesia TaxID=1649... [more]
A0A517VQ26_9PLAN2.750e-11887.18NHL repeat protein n=3 Tax=Gimesia TaxID=1649453 R... [more]
A0A3M1VLY8_9BACT2.010e-8971.28Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A518CHR6_9PLAN4.000e-8767.18Uncharacterized protein n=1 Tax=Polystyrenella lon... [more]
A0A3B9CVJ8_9PLAN5.490e-8768.72Uncharacterized protein n=1 Tax=Planctomycetaceae ... [more]
A0A2E0SL03_9PLAN1.610e-8667.69Uncharacterized protein n=1 Tax=Planctomyces sp. T... [more]
A0A356AG30_9PLAN5.310e-8366.15Uncharacterized protein n=4 Tax=Planctomycetaceae ... [more]
A0A3B1DTW0_9ZZZZ9.560e-8164.50Uncharacterized protein n=1 Tax=hydrothermal vent ... [more]
A0A3N5RFP4_9PLAN1.060e-8063.59Uncharacterized protein n=2 Tax=Planctomycetaceae ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig111798contigM-pyrifera_M_contig111798:3..587 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score376.3
Seed ortholog evalue8.5e-102
Seed eggNOG ortholog344747.PM8797T_11706
Hectar predicted targeting categoryother localisation
EggNOG free text desc.amine dehydrogenase activity
EggNOG OGs2IYZ2@203682,COG3391@1,COG3391@2
COG Functional cat.S
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
Exons1
Model size585
Cds size585
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815631.3331993-CDS-M-pyrifera_M_contig111798:2..5871622815631.3331993-CDS-M-pyrifera_M_contig111798:2..587Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig111798 3..587 +
1692277496.1900122-CDS-M-pyrifera_M_contig111798:2..5871692277496.1900122-CDS-M-pyrifera_M_contig111798:2..587Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig111798 3..587 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig111798.2465.1prot_M-pyrifera_M_contig111798.2465.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig111798 3..587 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig111798.2465.1

>prot_M-pyrifera_M_contig111798.2465.1 ID=prot_M-pyrifera_M_contig111798.2465.1|Name=mRNA_M-pyrifera_M_contig111798.2465.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=195bp
IAGYPTDVYGKGSKYNIGPLGVAFMDKDHLVVGDGSRPDGEELVRIYKVG
DKPLAKWVKEDTAAQTLGPIKAGDKSAKGEGNFYGVAFGDGAIFVTCNGD
DTKGWVAKSVVKDGKAGPLEPSIETKTATNVDAPAAITFTLDGKELVVGQ
MGEVNVAGDSLLTFYDPKTGKLTKSLKTGLSDIAGLAYSPKTKKL
back to top

mRNA from alignment at M-pyrifera_M_contig111798:3..587+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig111798.2465.1 ID=mRNA_M-pyrifera_M_contig111798.2465.1|Name=mRNA_M-pyrifera_M_contig111798.2465.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=585bp|location=Sequence derived from alignment at M-pyrifera_M_contig111798:3..587+ (Macrocystis pyrifera P11B4 male)
ATCGCCGGTTACCCGACCGACGTCTACGGCAAAGGTTCTAAATACAACAT CGGACCTCTGGGCGTGGCTTTCATGGATAAAGATCATCTCGTCGTAGGTG ACGGCAGCCGTCCCGATGGTGAAGAACTGGTTCGCATCTACAAAGTCGGC GACAAGCCACTGGCCAAGTGGGTGAAAGAAGACACCGCAGCTCAGACTCT GGGGCCGATCAAAGCTGGCGACAAGTCTGCCAAAGGCGAAGGTAACTTCT ACGGCGTCGCTTTTGGCGACGGTGCGATCTTCGTTACCTGTAACGGCGAC GACACCAAAGGCTGGGTCGCCAAGTCGGTTGTCAAAGACGGCAAAGCCGG TCCGCTGGAACCCAGCATCGAAACCAAAACCGCAACTAACGTTGATGCTC CTGCAGCCATCACCTTCACACTCGACGGCAAAGAACTGGTCGTCGGTCAG ATGGGTGAAGTCAACGTCGCCGGCGATTCGCTGCTGACCTTCTACGATCC CAAAACCGGTAAGCTGACCAAGAGCCTGAAAACCGGCCTGAGCGACATCG CCGGCCTGGCTTACAGCCCCAAAACCAAGAAACTG
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig111798:3..587+

>mRNA_M-pyrifera_M_contig111798.2465.1 ID=mRNA_M-pyrifera_M_contig111798.2465.1|Name=mRNA_M-pyrifera_M_contig111798.2465.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1170bp|location=Sequence derived from alignment at M-pyrifera_M_contig111798:3..587+ (Macrocystis pyrifera P11B4 male)
ATCGCCGGTTACCCGACCGACGTCTACGGCAAAGGTTCTAAATACAACAT
CGGACCTCTGGGCGTGGCTTTCATGGATAAAGATCATCTCGTCGTAGGTG
ACGGCAGCCGTCCCGATGGTGAAGAACTGGTTCGCATCTACAAAGTCGGC
GACAAGCCACTGGCCAAGTGGGTGAAAGAAGACACCGCAGCTCAGACTCT
GGGGCCGATCAAAGCTGGCGACAAGTCTGCCAAAGGCGAAGGTAACTTCT
ACGGCGTCGCTTTTGGCGACGGTGCGATCTTCGTTACCTGTAACGGCGAC
GACACCAAAGGCTGGGTCGCCAAGTCGGTTGTCAAAGACGGCAAAGCCGG
TCCGCTGGAACCCAGCATCGAAACCAAAACCGCAACTAACGTTGATGCTC
CTGCAGCCATCACCTTCACACTCGACGGCAAAGAACTGGTCGTCGGTCAG
ATGGGTGAAGTCAACGTCGCCGGCGATTCGCTGCTGACCTTCTACGATCC
CAAAACCGGTAAGCTGACCAAGAGCCTGAAAACCGGCCTGAGCGACATCG
CCGGCCTGGCTTACAGCCCCAAAACCAAGAAACTGATCGCCGGTTACCCG
ACCGACGTCTACGGCAAAGGTTCTAAATACAACATCGGACCTCTGGGCGT
GGCTTTCATGGATAAAGATCATCTCGTCGTAGGTGACGGCAGCCGTCCCG
ATGGTGAAGAACTGGTTCGCATCTACAAAGTCGGCGACAAGCCACTGGCC
AAGTGGGTGAAAGAAGACACCGCAGCTCAGACTCTGGGGCCGATCAAAGC
TGGCGACAAGTCTGCCAAAGGCGAAGGTAACTTCTACGGCGTCGCTTTTG
GCGACGGTGCGATCTTCGTTACCTGTAACGGCGACGACACCAAAGGCTGG
GTCGCCAAGTCGGTTGTCAAAGACGGCAAAGCCGGTCCGCTGGAACCCAG
CATCGAAACCAAAACCGCAACTAACGTTGATGCTCCTGCAGCCATCACCT
TCACACTCGACGGCAAAGAACTGGTCGTCGGTCAGATGGGTGAAGTCAAC
GTCGCCGGCGATTCGCTGCTGACCTTCTACGATCCCAAAACCGGTAAGCT
GACCAAGAGCCTGAAAACCGGCCTGAGCGACATCGCCGGCCTGGCTTACA
GCCCCAAAACCAAGAAACTG
back to top