mRNA_M-pyrifera_M_contig111778.2461.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig111778.2461.1
Unique NamemRNA_M-pyrifera_M_contig111778.2461.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig111778.2461.1 vs. uniprot
Match: F4PX08_CAVFA (Neurofibromin n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PX08_CAVFA)

HSP 1 Score: 168 bits (426), Expect = 8.200e-45
Identity = 87/186 (46.77%), Postives = 130/186 (69.89%), Query Frame = 1 
Query:   19 EQIIQQLTASKDRYNLSSPQNSIARSKAFRPSDVPGTLLNMALLNLTASNHALRVAAYNLLVSLCASFSFSVSFNLLEATDIAIPRNCTEFVVNVSTELAQNEPSMTLEFLLEALQGINKTDKIGQILVLDYMRPWIANLRSLEDVKGQPDEAAKLSKFKDLFSSFLALTIRESSEIEPDILSKVW 576
            +QI+Q +  SK R+ LS P + +A +++FRP D+PGTLLN+ALLNL ++ +ALRVAAYN+L +LC + +FS++  LLE + + IP+N T+FV+ VS +L++ E  +TLEFL E L GI K   + + LVLDY+ PWIANL         P+ A KL+K   + ++ + L+IRE+ +++  ILSKVW
Sbjct: 1735 QQILQAVNQSKARWKLSKPDSKLA-NRSFRPQDIPGTLLNVALLNLGSTKNALRVAAYNMLSALCRNSNFSLNLQLLETSGLCIPKNSTQFVIRVSEKLSRTETGLTLEFLAECLHGITKASAVAKYLVLDYVSPWIANLALFTQPSPTPEAAEKLAKTNTVINALIDLSIRET-QMKSIILSKVW 1918
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BLAST of mRNA_M-pyrifera_M_contig111778.2461.1 vs. uniprot
Match: L8GHJ9_ACACA (Gtpase-activator protein for Ras family gtpase n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GHJ9_ACACA)

HSP 1 Score: 159 bits (401), Expect = 1.870e-41
Identity = 90/193 (46.63%), Postives = 126/193 (65.28%), Query Frame = 1 
Query:   16 SEQIIQQLTASKDRYNLSSPQ-NSIARSKAFRPSDVPGTLLNMALLNLTASNHALRVAAYNLLVSLCASFSFSVSFNLLEATDIAIPRNCTEFVVNVSTELAQNEPSMTLEFLLEALQGINK--TDKIGQILVLDYMRPWIANLRSLEDVKGQPDEAAKLSKFKDLFSSFLALTIRESSEIEPDILSKVWSLV 585
            S++I+  L ASK R NL+ P  +  +R ++FR SDVPGTLLNMALLNL  +N ALRV AYNLL SLCASF+ SV  +L E + +AIPRN   F+V +S +LA+ E +MTLEFL+EAL GI K   +  G+ L L+Y+  W+ NLR    +  + + A  + K   + +  +  TI+E+S   P I +KVW ++
Sbjct: 1744 SDRIVMALKASKARLNLAKPAADPSSRKRSFRASDVPGTLLNMALLNLGNTNAALRVEAYNLLASLCASFNLSVQLHLWETSGLAIPRNTNSFIVGLSKKLARTEANMTLEFLIEALHGIEKIKANLPGKQLCLNYLTHWLPNLRDFCLLTDKSESALNIDKTTQIVTMLMDFTIKETSMTGPAIQTKVWEVI 1936
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BLAST of mRNA_M-pyrifera_M_contig111778.2461.1 vs. uniprot
Match: A0A8J4Q1Q7_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4Q1Q7_9MYCE)

HSP 1 Score: 159 bits (401), Expect = 1.870e-41
Identity = 89/191 (46.60%), Postives = 127/191 (66.49%), Query Frame = 1 
Query:   19 EQIIQQLTASKDRYNLSSPQNSIARSKAFRPSDVPGTLLNMALLNLTASNHALRVAAYNLLVSLCASFSFSVSFNLLEATDIAIPRNCTEFVVNVSTELAQNEPSMTLEFLLEALQGINKTDKIGQILVLDYMRPWIANL-----RSLEDVKGQPDEAAKLSKFKDLFSSFLALTIRESSEIEPDILSKVW 576
            +QIIQ +  SK R+ LS P + I+ ++ FRP D+PGTLLN+ALLNL ++ +ALRVAAYN+L +LC + +FS+   LLE   + IP+N T+FV+ VS +LA+ E ++TLEFL E L GI K   + + LVLDY+ PWI NL     +S  D+    +E  K  K   + +S + L+I E+S ++  ILSKVW
Sbjct: 1761 QQIIQAVNQSKARWKLSKPDSKIS-NRVFRPQDIPGTLLNVALLNLGSTRNALRVAAYNMLSALCRNSNFSLKLQLLETNGLCIPKNSTQFVIRVSEKLAKTEKALTLEFLSECLYGIKKASAVAKYLVLDYISPWIPNLEIFCHKSSTDIHSSSEE--KYQKTISVINSLIDLSITETS-MKASILSKVW 1947
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BLAST of mRNA_M-pyrifera_M_contig111778.2461.1 vs. uniprot
Match: W6K4Y2_DICDI (Neurofibromin 1 n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=W6K4Y2_DICDI)

HSP 1 Score: 153 bits (387), Expect = 1.420e-39
Identity = 84/186 (45.16%), Postives = 124/186 (66.67%), Query Frame = 1 
Query:   19 EQIIQQLTASKDRYNLSSPQNSIARSKAFRPSDVPGTLLNMALLNLTASNHALRVAAYNLLVSLCASFSFSVSFNLLEATDIAIPRNCTEFVVNVSTELAQNEPSMTLEFLLEALQGINKTDKIGQILVLDYMRPWIANLRSLEDVKGQPDEAAKLSKFKDLFSSFLALTIRESSEIEPDILSKVW 576
            +Q+IQ +  SK R+ LS P+  I+ ++ FRP D+PGTLLN+ALLNL ++ +ALRVA+YN+L +LC + +FS+   LLE   + IP+N T+FV+ VS +LA+ E ++TLEFL E L GI K   + + L+LDY+ PWI NL          +E  K  K  ++ +S + L +RE+S ++  ILSKVW
Sbjct: 1753 QQVIQAVNQSKARWKLSKPETKIS-NRVFRPQDIPGTLLNVALLNLGSTKNALRVASYNMLSALCRNSNFSLKHQLLETNGLCIPKNSTQFVIRVSEKLAKTETALTLEFLTECLHGITKASAVAKYLILDYISPWIPNLVIFCQKSENFEE--KYQKTINVITSLIDLGVREAS-MKSIILSKVW 1934
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BLAST of mRNA_M-pyrifera_M_contig111778.2461.1 vs. uniprot
Match: UPI000644D540 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644D540)

HSP 1 Score: 151 bits (381), Expect = 9.070e-39
Identity = 79/195 (40.51%), Postives = 131/195 (67.18%), Query Frame = 1 
Query:    1 LYSSSSEQIIQQLTASKDRYNLSSPQNSIARSKAFRPSDVPGTLLNMALLNLTASNHALRVAAYNLLVSLCASFSFSVSFNLLEATDIAIPRNCTEFVVNVSTELAQNEPSMTLEFLLEALQGINKTDKIGQILVLDYMRPWIANLRSLEDVKGQPDEAAKLSKFKDLFSSFLALTIRESSEIEPDILSKVWSLV 585
            L S+  +Q+IQ +     R+ LS P+  ++ S+ FRP D+PGTLLN+ALLNL ++ +ALRVAAYN+L +LC + +FS++  LLE + + IP+N ++F++ +S +L++ +  +TLEFL E+L GI++   I + LVLDY+ PWI NL       G PD   +  K  ++ +  + L+I+E+S ++  IL+K+W+ +
Sbjct: 1726 LRSAQRKQVIQAIVQCIARWKLSKPETKVS-SRVFRPQDIPGTLLNVALLNLGSTRNALRVAAYNMLSALCRNSNFSINMQLLETSGLCIPKNISQFIIRISDKLSKTQTPLTLEFLQESLHGISRASAIAKHLVLDYIEPWIPNLTLFCQRPG-PDHLERYKKTINVINQLIDLSIKEAS-MKSVILAKIWTTI 1917
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BLAST of mRNA_M-pyrifera_M_contig111778.2461.1 vs. uniprot
Match: A0A152A6G6_9MYCE (Ras-GAP domain-containing protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A152A6G6_9MYCE)

HSP 1 Score: 150 bits (380), Expect = 1.230e-38
Identity = 86/192 (44.79%), Postives = 121/192 (63.02%), Query Frame = 1 
Query:    1 LYSSSSEQIIQQLTASKDRYNLSSPQNSIARSKAFRPSDVPGTLLNMALLNLTASNHALRVAAYNLLVSLCASFSFSVSFNLLEATDIAIPRNCTEFVVNVSTELAQNEPSMTLEFLLEALQGINKTDKIGQILVLDYMRPWIANLRSLEDVKGQPDEAAKLSKFKDLFSSFLALTIRESSEIEPDILSKVW 576
            L S S +QIIQ +   K R+ LS P  +   ++ FRP D+PGTLLN+ALLNL ++ +ALRVAAYN+L +LC + +F++   LLE   + IP+N T+FV+ VS +LA+ E  +TLEFL E L GI K   + + LVLDY+ PWI NL          +E  K  K   + +S + L++ E S ++  ILSKVW
Sbjct: 1731 LRSPSVQQIIQAINQLKARWKLSKPDQTKISNRVFRPQDIPGTLLNVALLNLGSTRNALRVAAYNMLSALCRNSNFALKLQLLETNGLCIPKNSTQFVIRVSEKLAKTEKPLTLEFLSECLHGITKASAVAKYLVLDYISPWIPNLADFCQKSCLNEE--KYQKTITVLNSLIDLSLHEVS-MKSLILSKVW 1919
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BLAST of mRNA_M-pyrifera_M_contig111778.2461.1 vs. uniprot
Match: UPI000F555BC3 (LOW QUALITY PROTEIN: neurofibromin-like n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=UPI000F555BC3)

HSP 1 Score: 148 bits (374), Expect = 7.870e-38
Identity = 82/195 (42.05%), Postives = 116/195 (59.49%), Query Frame = 1 
Query:    1 LYSSSSEQIIQQLTASKDRYNLSSPQNSIARSKAFRPSDVPGTLLNMALLNLTASNHALRVAAYNLLVSLCASFSFSVSFNLLEATDIAIPRNCTEFVVNVSTELAQNEPSMTLEFLLEALQGINKTDKIGQILVLDYMRPWIANLRSLEDVKGQPDEAAKLSKFKDLFSSFLALTIRESSEIEPDILSKVWSLV 585
            L S+ SEQI+Q +T  K R+ LS P +S   SK  +P DVPGTLLNMALLNL  S+ +LR+AAYNLL S+  SF+  +   LLE T + IP N T F+V +S +LA  EP +TLEFL E + G  K+D   + L L+YM PW+ NL           +  K+++   +    + LT++E   + P + + +W  V
Sbjct: 1531 LMSNDSEQIVQAVTHVKTRWQLSQPDSSTTTSKKIKPKDVPGTLLNMALLNLGTSDPSLRLAAYNLLCSVTKSFNLKIEERLLEGTGLCIPANNTLFIVGISEKLAAREPQLTLEFLEECIAGFVKSDYELKHLCLEYMAPWLPNLARFCRFPADDPQKVKMTR---ILEELINLTVKEKGTMYPSVQATIWGNV 1722
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BLAST of mRNA_M-pyrifera_M_contig111778.2461.1 vs. uniprot
Match: UPI0009E26095 (neurofibromin-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E26095)

HSP 1 Score: 148 bits (373), Expect = 1.070e-37
Identity = 82/195 (42.05%), Postives = 116/195 (59.49%), Query Frame = 1 
Query:    1 LYSSSSEQIIQQLTASKDRYNLSSPQNSIARSKAFRPSDVPGTLLNMALLNLTASNHALRVAAYNLLVSLCASFSFSVSFNLLEATDIAIPRNCTEFVVNVSTELAQNEPSMTLEFLLEALQGINKTDKIGQILVLDYMRPWIANLRSLEDVKGQPDEAAKLSKFKDLFSSFLALTIRESSEIEPDILSKVWSLV 585
            L S+  EQI+Q +T  K R+ LS P +S A SK  +P DVPGTLLNMALLNL  S+ +LR+AAYNLL S+  SF+  +   LLE T + IP N T F+V +S +LA  EP +TLEFL E + G  K+D   + L L+YM PW+ NL           +  K+++   +    + LT++E   + P + + +W  V
Sbjct: 1604 LMSNDCEQIVQAVTHVKTRWQLSQPDSSTATSKKIKPKDVPGTLLNMALLNLGTSDPSLRLAAYNLLCSVTKSFNLKIEERLLEGTGLCIPTNNTLFIVGISEKLAAREPQLTLEFLEECIAGFVKSDYELKHLCLEYMAPWLPNLARFCRFPADDPQKVKMTR---ILEELINLTVKEKGTMYPSVQATIWGNV 1795
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BLAST of mRNA_M-pyrifera_M_contig111778.2461.1 vs. uniprot
Match: UPI001CF2AF0A (neurofibromin-like n=2 Tax=Acropora TaxID=6127 RepID=UPI001CF2AF0A)

HSP 1 Score: 146 bits (369), Expect = 3.710e-37
Identity = 81/195 (41.54%), Postives = 116/195 (59.49%), Query Frame = 1 
Query:    1 LYSSSSEQIIQQLTASKDRYNLSSPQNSIARSKAFRPSDVPGTLLNMALLNLTASNHALRVAAYNLLVSLCASFSFSVSFNLLEATDIAIPRNCTEFVVNVSTELAQNEPSMTLEFLLEALQGINKTDKIGQILVLDYMRPWIANLRSLEDVKGQPDEAAKLSKFKDLFSSFLALTIRESSEIEPDILSKVWSLV 585
            L S+ +EQI++ +T  K R+ LS P +S A SK  +P DVPGTLLNMALLNL  S+ +LR+AAYNLL S+  SF+  +   LLE T + IP N T F+V +S +LA  EP +TLEFL E + G  K+D   + L L+YM PW+ NL           +  K++    +    + LT++E   + P + + +W  V
Sbjct: 1705 LMSNHTEQIVEAVTHVKTRWQLSQPDSSTAASKKIKPKDVPGTLLNMALLNLGTSDPSLRLAAYNLLCSVTKSFNLKIEERLLEGTGLCIPANNTLFIVGISEKLAAREPQLTLEFLEECIAGFVKSDYELKHLCLEYMAPWLPNLARFFRYPADDPQKVKMTH---ILEELINLTVKEKGAMYPSVQATIWGNV 1896
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BLAST of mRNA_M-pyrifera_M_contig111778.2461.1 vs. uniprot
Match: A0A6S7GCF9_PARCT (Neurofibromin isoform X4 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7GCF9_PARCT)

HSP 1 Score: 145 bits (366), Expect = 9.310e-37
Identity = 83/190 (43.68%), Postives = 113/190 (59.47%), Query Frame = 1 
Query:    7 SSSSEQIIQQLTASKDRYNLSSPQNSIARSKAFRPSDVPGTLLNMALLNLTASNHALRVAAYNLLVSLCASFSFSVSFNLLEATDIAIPRNCTEFVVNVSTELAQNEPSMTLEFLLEALQGINKTDKIGQILVLDYMRPWIANLRSLEDVKGQPDEAAKLSKFKDLFSSFLALTIRESSEIEPDILSKVW 576
            S+ S+QI+Q +T  K R+ +S P N  A  K   P DVPGTLLNMALLNL   + +LR+AAYNLL SL A F F +   L E T + IP N T F+V +S+ LA  EP +TLEFL E + G  K++   + L L+YM PW+ANL        +P +  KL++   +    + LTI E   + P I +K+W
Sbjct: 1382 SNESDQIVQAVTHLKKRWQMSQP-NQTAAIKKILPKDVPGTLLNMALLNLGTRDPSLRLAAYNLLCSLTAVFHFKIEERLFEGTGLCIPANNTIFIVGISSSLANKEPHLTLEFLQECITGFKKSNHELKHLCLEYMAPWLANLSRYCK---EPTKGTKLAQVNAILEDLIELTIAEKGAMYPSIQAKIW 1567
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig111778.2461.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
F4PX08_CAVFA8.200e-4546.77Neurofibromin n=1 Tax=Cavenderia fasciculata (stra... [more]
L8GHJ9_ACACA1.870e-4146.63Gtpase-activator protein for Ras family gtpase n=1... [more]
A0A8J4Q1Q7_9MYCE1.870e-4146.60Uncharacterized protein n=1 Tax=Polysphondylium vi... [more]
W6K4Y2_DICDI1.420e-3945.16Neurofibromin 1 n=1 Tax=Dictyostelium discoideum T... [more]
UPI000644D5409.070e-3940.51hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
A0A152A6G6_9MYCE1.230e-3844.79Ras-GAP domain-containing protein n=1 Tax=Tieghemo... [more]
UPI000F555BC37.870e-3842.05LOW QUALITY PROTEIN: neurofibromin-like n=1 Tax=Po... [more]
UPI0009E260951.070e-3742.05neurofibromin-like n=1 Tax=Orbicella faveolata Tax... [more]
UPI001CF2AF0A3.710e-3741.54neurofibromin-like n=2 Tax=Acropora TaxID=6127 Rep... [more]
A0A6S7GCF9_PARCT9.310e-3743.68Neurofibromin isoform X4 n=1 Tax=Paramuricea clava... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig111778contigM-pyrifera_M_contig111778:5..589 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeOpisthokonta
Seed ortholog score135.2
Seed ortholog evalue3.3e-29
Seed eggNOG ortholog192875.XP_004364674.1
Preferred nameNF1
KEGG koko:K08052
KEGG Pathwayko01521,ko04010,ko04014,map01521,map04010,map04014
Hectar predicted targeting categoryother localisation
GOsGO:0000165,GO:0000302,GO:0001503,GO:0001505,GO:0001568,GO:0001649,GO:0001654,GO:0001655,GO:0001656,GO:0001666,GO:0001822,GO:0001889,GO:0001932,GO:0001933,GO:0001936,GO:0001937,GO:0001938,GO:0001942,GO:0001944,GO:0001952,GO:0001953,GO:0002682,GO:0002683,GO:0002761,GO:0002762,GO:0003008,GO:0003674,GO:0005096,GO:0005488,GO:0005515,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005783,GO:0005789,GO:0005829,GO:0005886,GO:0006464,GO:0006468,GO:0006469,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006835,GO:0006836,GO:0006865,GO:0006915,GO:0006950,GO:0006979,GO:0006996,GO:0007010,GO:0007154,GO:0007162,GO:0007165,GO:0007166,GO:0007264,GO:0007265,GO:0007267,GO:0007268,GO:0007269,GO:0007272,GO:0007275,GO:0007399,GO:0007406,GO:0007417,GO:0007420,GO:0007422,GO:0007423,GO:0007507,GO:0007517,GO:0007519,GO:0007568,GO:0007610,GO:0007611,GO:0007612,GO:0007613,GO:0007614,GO:0007616,GO:0007622,GO:0007623,GO:0007626,GO:0007632,GO:0007635,GO:0008017,GO:0008047,GO:0008092,GO:0008150,GO:0008152,GO:0008219,GO:0008284,GO:0008285,GO:0008289,GO:0008306,GO:0008340,GO:0008344,GO:0008355,GO:0008366,GO:0008429,GO:0008542,GO:0008544,GO:0008582,GO:0008625,GO:0009266,GO:0009314,GO:0009408,GO:0009409,GO:0009410,GO:0009416,GO:0009611,GO:0009628,GO:0009636,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009792,GO:0009887,GO:0009888,GO:0009892,GO:0009898,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010001,GO:0010033,GO:0010035,GO:0010038,GO:0010259,GO:0010468,GO:0010563,GO:0010594,GO:0010605,GO:0010632,GO:0010646,GO:0010647,GO:0010648,GO:0010720,GO:0010721,GO:0010810,GO:0010812,GO:0010941,GO:0010942,GO:0010975,GO:0010976,GO:0012501,GO:0012505,GO:0014002,GO:0014013,GO:0014014,GO:0014037,GO:0014044,GO:0014047,GO:0014051,GO:0014065,GO:0014069,GO:0014070,GO:0014706,GO:0015631,GO:0015711,GO:0015718,GO:0015800,GO:0015812,GO:0015849,GO:0016020,GO:0016021,GO:0016043,GO:0016049,GO:0016310,GO:0016525,GO:0019220,GO:0019222,GO:0019538,GO:0019932,GO:0019933,GO:0019935,GO:0021510,GO:0021537,GO:0021543,GO:0021700,GO:0021761,GO:0021764,GO:0021782,GO:0021896,GO:0021897,GO:0021915,GO:0021987,GO:0022008,GO:0022011,GO:0022404,GO:0022405,GO:0022603,GO:0023014,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0023061,GO:0030029,GO:0030036,GO:0030154,GO:0030155,GO:0030198,GO:0030199,GO:0030234,GO:0030325,GO:0030334,GO:0030336,GO:0030424,GO:0030425,GO:0030534,GO:0030695,GO:0030900,GO:0031210,GO:0031224,GO:0031226,GO:0031235,GO:0031279,GO:0031281,GO:0031323,GO:0031324,GO:0031344,GO:0031346,GO:0031399,GO:0031400,GO:0031960,GO:0031984,GO:0032228,GO:0032268,GO:0032269,GO:0032279,GO:0032292,GO:0032386,GO:0032387,GO:0032501,GO:0032502,GO:0032870,GO:0032879,GO:0032880,GO:0032940,GO:0032991,GO:0033157,GO:0033554,GO:0033673,GO:0033993,GO:0034103,GO:0034599,GO:0034605,GO:0034614,GO:0035020,GO:0035021,GO:0035239,GO:0035249,GO:0035270,GO:0035295,GO:0035556,GO:0035690,GO:0036211,GO:0036293,GO:0036477,GO:0040007,GO:0040008,GO:0040012,GO:0040013,GO:0040014,GO:0040018,GO:0042048,GO:0042060,GO:0042063,GO:0042065,GO:0042066,GO:0042127,GO:0042175,GO:0042221,GO:0042303,GO:0042306,GO:0042308,GO:0042325,GO:0042326,GO:0042493,GO:0042542,GO:0042552,GO:0042633,GO:0042981,GO:0042995,GO:0043005,GO:0043009,GO:0043010,GO:0043062,GO:0043065,GO:0043067,GO:0043068,GO:0043085,GO:0043086,GO:0043087,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043394,GO:0043405,GO:0043407,GO:0043408,GO:0043409,GO:0043412,GO:0043473,GO:0043523,GO:0043525,GO:0043535,GO:0043547,GO:0043549,GO:0043588,GO:0043933,GO:0044087,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045124,GO:0045202,GO:0045475,GO:0045545,GO:0045595,GO:0045596,GO:0045597,GO:0045637,GO:0045638,GO:0045664,GO:0045666,GO:0045670,GO:0045671,GO:0045685,GO:0045686,GO:0045761,GO:0045762,GO:0045765,GO:0045859,GO:0045886,GO:0045926,GO:0045927,GO:0045936,GO:0046578,GO:0046580,GO:0046677,GO:0046717,GO:0046822,GO:0046823,GO:0046850,GO:0046903,GO:0046928,GO:0046929,GO:0046942,GO:0048015,GO:0048017,GO:0048145,GO:0048147,GO:0048167,GO:0048168,GO:0048169,GO:0048468,GO:0048483,GO:0048485,GO:0048511,GO:0048512,GO:0048513,GO:0048514,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048545,GO:0048583,GO:0048584,GO:0048585,GO:0048588,GO:0048589,GO:0048592,GO:0048593,GO:0048638,GO:0048639,GO:0048640,GO:0048699,GO:0048708,GO:0048710,GO:0048712,GO:0048713,GO:0048715,GO:0048731,GO:0048732,GO:0048745,GO:0048820,GO:0048844,GO:0048853,GO:0048854,GO:0048856,GO:0048869,GO:0050678,GO:0050679,GO:0050680,GO:0050767,GO:0050768,GO:0050769,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050803,GO:0050804,GO:0050805,GO:0050807,GO:0050877,GO:0050890,GO:0050896,GO:0050997,GO:0051046,GO:0051048,GO:0051049,GO:0051051,GO:0051056,GO:0051058,GO:0051093,GO:0051094,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051172,GO:0051174,GO:0051179,GO:0051223,GO:0051224,GO:0051234,GO:0051239,GO:0051240,GO:0051241,GO:0051246,GO:0051248,GO:0051270,GO:0051271,GO:0051336,GO:0051338,GO:0051339,GO:0051345,GO:0051348,GO:0051349,GO:0051384,GO:0051588,GO:0051589,GO:0051641,GO:0051649,GO:0051716,GO:0051932,GO:0051960,GO:0051961,GO:0051962,GO:0051963,GO:0051964,GO:0060255,GO:0060284,GO:0060322,GO:0060341,GO:0060429,GO:0060537,GO:0060538,GO:0060589,GO:0060840,GO:0061008,GO:0061061,GO:0061534,GO:0061535,GO:0065007,GO:0065008,GO:0065009,GO:0070201,GO:0070301,GO:0070405,GO:0070417,GO:0070482,GO:0070848,GO:0070887,GO:0071236,GO:0071241,GO:0071248,GO:0071310,GO:0071363,GO:0071383,GO:0071384,GO:0071385,GO:0071396,GO:0071407,GO:0071466,GO:0071495,GO:0071548,GO:0071549,GO:0071695,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071900,GO:0071901,GO:0071944,GO:0072001,GO:0072091,GO:0072358,GO:0072359,GO:0080090,GO:0090087,GO:0090317,GO:0090596,GO:0097190,GO:0097191,GO:0097237,GO:0097327,GO:0097367,GO:0097435,GO:0097447,GO:0097458,GO:0098552,GO:0098562,GO:0098597,GO:0098772,GO:0098773,GO:0098794,GO:0098827,GO:0098916,GO:0098984,GO:0099177,GO:0099536,GO:0099537,GO:0099572,GO:0099643,GO:0120025,GO:0120035,GO:0120038,GO:1900180,GO:1900181,GO:1900271,GO:1901214,GO:1901216,GO:1901342,GO:1901343,GO:1901564,GO:1901654,GO:1901655,GO:1901700,GO:1901701,GO:1902041,GO:1902043,GO:1902105,GO:1902106,GO:1902531,GO:1902532,GO:1902692,GO:1903530,GO:1903531,GO:1903706,GO:1903707,GO:1903827,GO:1903828,GO:1904396,GO:1904397,GO:1904589,GO:1904590,GO:1904950,GO:1905809,GO:1990089,GO:1990090,GO:2000026,GO:2000145,GO:2000146,GO:2000177,GO:2000178,GO:2000181,GO:2000647,GO:2001233,GO:2001235,GO:2001236,GO:2001238,GO:2001239,GO:2001241
EggNOG free text desc.gamma-aminobutyric acid secretion, neurotransmission
EggNOG OGs38EMB@33154,KOG1826@1,KOG1826@2759
COG Functional cat.V
Best tax levelOpisthokonta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Exons1
Model size585
Cds size585
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815631.1514065-CDS-M-pyrifera_M_contig111778:4..5891622815631.1514065-CDS-M-pyrifera_M_contig111778:4..589Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig111778 5..589 -
1692277496.1351633-CDS-M-pyrifera_M_contig111778:4..5891692277496.1351633-CDS-M-pyrifera_M_contig111778:4..589Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig111778 5..589 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig111778.2461.1prot_M-pyrifera_M_contig111778.2461.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig111778 5..589 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig111778.2461.1

>prot_M-pyrifera_M_contig111778.2461.1 ID=prot_M-pyrifera_M_contig111778.2461.1|Name=mRNA_M-pyrifera_M_contig111778.2461.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=195bp
LYSSSSEQIIQQLTASKDRYNLSSPQNSIARSKAFRPSDVPGTLLNMALL
NLTASNHALRVAAYNLLVSLCASFSFSVSFNLLEATDIAIPRNCTEFVVN
VSTELAQNEPSMTLEFLLEALQGINKTDKIGQILVLDYMRPWIANLRSLE
DVKGQPDEAAKLSKFKDLFSSFLALTIRESSEIEPDILSKVWSLV
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mRNA from alignment at M-pyrifera_M_contig111778:5..589-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig111778.2461.1 ID=mRNA_M-pyrifera_M_contig111778.2461.1|Name=mRNA_M-pyrifera_M_contig111778.2461.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=585bp|location=Sequence derived from alignment at M-pyrifera_M_contig111778:5..589- (Macrocystis pyrifera P11B4 male)
CTCTACAGCAGCAGCTCCGAGCAGATCATCCAGCAGCTCACCGCCTCGAA
GGACCGCTACAACCTCTCGAGCCCGCAGAACTCCATTGCCAGGAGCAAGG
CCTTCCGCCCCTCTGACGTGCCTGGCACGCTGCTCAATATGGCGCTGCTC
AACCTGACGGCCTCGAACCACGCCCTGCGTGTGGCAGCCTACAATCTCCT
CGTGTCGCTCTGCGCCTCCTTCTCATTCTCGGTCAGCTTCAACCTCCTGG
AGGCGACAGACATTGCCATCCCCCGCAACTGTACCGAGTTCGTCGTCAAC
GTCAGTACTGAGCTGGCGCAGAACGAGCCCAGCATGACGCTGGAGTTTCT
CCTCGAGGCACTGCAGGGCATCAACAAGACGGACAAGATCGGTCAGATCC
TCGTGCTGGACTACATGCGGCCCTGGATCGCCAACCTCCGCTCGCTCGAG
GACGTGAAGGGCCAGCCAGACGAGGCTGCCAAGCTGAGCAAGTTCAAGGA
CCTCTTCAGCTCCTTCCTGGCCCTCACCATCCGCGAGTCGTCAGAGATCG
AGCCCGACATCCTCTCCAAGGTGTGGTCGCTGGTC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig111778:5..589-

>mRNA_M-pyrifera_M_contig111778.2461.1 ID=mRNA_M-pyrifera_M_contig111778.2461.1|Name=mRNA_M-pyrifera_M_contig111778.2461.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1170bp|location=Sequence derived from alignment at M-pyrifera_M_contig111778:5..589- (Macrocystis pyrifera P11B4 male)
CTCTACAGCAGCAGCTCCGAGCAGATCATCCAGCAGCTCACCGCCTCGAA
GGACCGCTACAACCTCTCGAGCCCGCAGAACTCCATTGCCAGGAGCAAGG
CCTTCCGCCCCTCTGACGTGCCTGGCACGCTGCTCAATATGGCGCTGCTC
AACCTGACGGCCTCGAACCACGCCCTGCGTGTGGCAGCCTACAATCTCCT
CGTGTCGCTCTGCGCCTCCTTCTCATTCTCGGTCAGCTTCAACCTCCTGG
AGGCGACAGACATTGCCATCCCCCGCAACTGTACCGAGTTCGTCGTCAAC
GTCAGTACTGAGCTGGCGCAGAACGAGCCCAGCATGACGCTGGAGTTTCT
CCTCGAGGCACTGCAGGGCATCAACAAGACGGACAAGATCGGTCAGATCC
TCGTGCTGGACTACATGCGGCCCTGGATCGCCAACCTCCGCTCGCTCGAG
GACGTGAAGGGCCAGCCAGACGAGGCTGCCAAGCTGAGCAAGTTCAAGGA
CCTCTTCAGCTCCTTCCTGGCCCTCACCATCCGCGAGTCGTCAGAGATCG
AGCCCGACATCCTCTCCAAGGTGTGGTCGCTGGTCCTCTACAGCAGCAGC
TCCGAGCAGATCATCCAGCAGCTCACCGCCTCGAAGGACCGCTACAACCT
CTCGAGCCCGCAGAACTCCATTGCCAGGAGCAAGGCCTTCCGCCCCTCTG
ACGTGCCTGGCACGCTGCTCAATATGGCGCTGCTCAACCTGACGGCCTCG
AACCACGCCCTGCGTGTGGCAGCCTACAATCTCCTCGTGTCGCTCTGCGC
CTCCTTCTCATTCTCGGTCAGCTTCAACCTCCTGGAGGCGACAGACATTG
CCATCCCCCGCAACTGTACCGAGTTCGTCGTCAACGTCAGTACTGAGCTG
GCGCAGAACGAGCCCAGCATGACGCTGGAGTTTCTCCTCGAGGCACTGCA
GGGCATCAACAAGACGGACAAGATCGGTCAGATCCTCGTGCTGGACTACA
TGCGGCCCTGGATCGCCAACCTCCGCTCGCTCGAGGACGTGAAGGGCCAG
CCAGACGAGGCTGCCAAGCTGAGCAAGTTCAAGGACCTCTTCAGCTCCTT
CCTGGCCCTCACCATCCGCGAGTCGTCAGAGATCGAGCCCGACATCCTCT
CCAAGGTGTGGTCGCTGGTC
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