mRNA_M-pyrifera_M_contig111764.2457.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig111764.2457.1 vs. uniprot
Match: D8TP34_VOLCA (Uncharacterized protein n=4 Tax=Volvocaceae TaxID=3065 RepID=D8TP34_VOLCA) HSP 1 Score: 176 bits (446), Expect = 2.530e-48 Identity = 76/146 (52.05%), Postives = 113/146 (77.40%), Query Frame = 1
Query: 1 LTDEEEQRKEELSTQGFSNWSKKDFSIFLKCCEVYGRNSHALIAAETETKTPEEVAEYSAVFWERYEEVDGWEKMLTHIERGEVKLQKRDAMINALSAKMKKYKDPWKQLKVVYNTNKGKQFTAEEDRFLICMTHQVGYGNWDALK 438
LT+EE+ +E+L GF +W+K+DF+ F++ CE YGR + IAAE + KT EEV Y+ VFW+RY E+ WEK++ +IERGE K+Q++ ++NA++AK+++YK+PW++LK+ Y NKGK +T EEDRF++CM H++GYGNWD LK
Sbjct: 826 LTEEEQAEREQLLEDGFKDWTKRDFNAFVRACEKYGRENIPQIAAEVDGKTDEEVHAYAKVFWKRYRELSDWEKVIKNIERGEQKIQRQQDIMNAVAAKLERYKNPWQELKIQYGANKGKAYTEEEDRFILCMVHKLGYGNWDDLK 971
BLAST of mRNA_M-pyrifera_M_contig111764.2457.1 vs. uniprot
Match: I0Z4M3_COCSC (Uncharacterized protein n=2 Tax=Coccomyxa TaxID=41891 RepID=I0Z4M3_COCSC) HSP 1 Score: 174 bits (440), Expect = 1.580e-47 Identity = 75/146 (51.37%), Postives = 114/146 (78.08%), Query Frame = 1
Query: 1 LTDEEEQRKEELSTQGFSNWSKKDFSIFLKCCEVYGRNSHALIAAETETKTPEEVAEYSAVFWERYEEVDGWEKMLTHIERGEVKLQKRDAMINALSAKMKKYKDPWKQLKVVYNTNKGKQFTAEEDRFLICMTHQVGYGNWDALK 438
L +EE + KE+L ++GFSNW+++DF+ F++ CE YGRNS A I E + KT EEV+ YS FW+RY+E+ WE+++ +IERGE ++Q++ ++ A++AKM++YK+PW++LK+ Y NKGK +T EEDRF++CM H++GYG WD LK
Sbjct: 766 LGEEEIEEKEQLLSEGFSNWNRRDFNAFVRACEKYGRNSLAEITREVDGKTEEEVSTYSKTFWKRYKELSDWERVIKNIERGEQRIQRQQDIMTAIAAKMERYKNPWQELKLQYGANKGKAYTEEEDRFILCMVHKLGYGAWDELK 911
BLAST of mRNA_M-pyrifera_M_contig111764.2457.1 vs. uniprot
Match: A0A1Y1HX93_KLENI (Chromatin remodeling complex WSTF-ISWI small subunit n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HX93_KLENI) HSP 1 Score: 174 bits (440), Expect = 1.640e-47 Identity = 76/146 (52.05%), Postives = 111/146 (76.03%), Query Frame = 1
Query: 1 LTDEEEQRKEELSTQGFSNWSKKDFSIFLKCCEVYGRNSHALIAAETETKTPEEVAEYSAVFWERYEEVDGWEKMLTHIERGEVKLQKRDAMINALSAKMKKYKDPWKQLKVVYNTNKGKQFTAEEDRFLICMTHQVGYGNWDALK 438
LT EEE KE+L +GF NWS++DF+ F++ E YGR+ A IA E E KTP+EV +Y+AVFW+RY+E++ WEK + +IERGE ++ ++D M+ A+ K+ +Y++PW +LK+ Y NKGK +T E+DRFL+CM +++GYGNWD LK
Sbjct: 856 LTPEEEAEKEQLLQEGFDNWSRRDFNAFIRANEKYGRHDLASIATEIEGKTPDEVQDYAAVFWDRYQELNDWEKFIKNIERGEQRIARKDEMMQAIERKLARYRNPWYELKIQYGQNKGKLYTEEDDRFLLCMVNKLGYGNWDELK 1001
BLAST of mRNA_M-pyrifera_M_contig111764.2457.1 vs. uniprot
Match: Q4JLR9_CHLRE (Chromatin-remodelling complex ATPase ISWI2 n=4 Tax=Chlamydomonas TaxID=3052 RepID=Q4JLR9_CHLRE) HSP 1 Score: 173 bits (439), Expect = 2.220e-47 Identity = 75/146 (51.37%), Postives = 114/146 (78.08%), Query Frame = 1
Query: 1 LTDEEEQRKEELSTQGFSNWSKKDFSIFLKCCEVYGRNSHALIAAETETKTPEEVAEYSAVFWERYEEVDGWEKMLTHIERGEVKLQKRDAMINALSAKMKKYKDPWKQLKVVYNTNKGKQFTAEEDRFLICMTHQVGYGNWDALK 438
LT+EE + +E+L +GF W+K+DF+ F++ CE YGR + IAAE + KT +EV EY+ VFW+RY E+ +EK++ +IERGE K+Q++ ++NA++AK+++YK+PW++LK+ Y NKGK +T EEDRF++CM H++GYGNWD LK
Sbjct: 830 LTEEELEEREKLLEEGFKEWTKRDFNAFVRACEKYGRENIPQIAAEVDGKTEDEVREYAKVFWQRYRELADYEKVIKNIERGEQKIQRQQDIMNAIAAKLERYKNPWQELKIQYGANKGKAYTEEEDRFILCMVHKLGYGNWDDLK 975
BLAST of mRNA_M-pyrifera_M_contig111764.2457.1 vs. uniprot
Match: A0A2V0PM92_9CHLO (Chromatin-remodeling complex ATPase chain (Fragment) n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PM92_9CHLO) HSP 1 Score: 163 bits (412), Expect = 3.120e-47 Identity = 73/146 (50.00%), Postives = 108/146 (73.97%), Query Frame = 1
Query: 1 LTDEEEQRKEELSTQGFSNWSKKDFSIFLKCCEVYGRNSHALIAAETETKTPEEVAEYSAVFWERYEEVDGWEKMLTHIERGEVKLQKRDAMINALSAKMKKYKDPWKQLKVVYNTNKGKQFTAEEDRFLICMTHQVGYGNWDALK 438
LT+EE KE L T+GFS+W+++DF F++ CE YGR+ IA E +TK+ +EV Y+A FW RY+E++ WEK++ +IERGE K+Q++ ++ AL AK+++Y++PW+ LKV Y KGK + EEDRF++C TH++GYG WD LK
Sbjct: 22 LTEEEVAEKERLLTEGFSSWNRRDFGAFVRACEKYGRDRLDQIAGELDTKSLDEVKAYAAAFWARYQELNDWEKVIKNIERGEQKIQRQADIMAALRAKIERYRNPWQDLKVAYGQAKGKAYNEEEDRFILCKTHELGYGAWDELK 167
BLAST of mRNA_M-pyrifera_M_contig111764.2457.1 vs. uniprot
Match: A0A7J8P7W4_GOSRA (SANT domain-containing protein (Fragment) n=2 Tax=Gossypium TaxID=3633 RepID=A0A7J8P7W4_GOSRA) HSP 1 Score: 159 bits (403), Expect = 2.780e-46 Identity = 72/146 (49.32%), Postives = 107/146 (73.29%), Query Frame = 1
Query: 1 LTDEEEQRKEELSTQGFSNWSKKDFSIFLKCCEVYGRNSHALIAAETETKTPEEVAEYSAVFWERYEEVDGWEKMLTHIERGEVKLQKRDAMINALSAKMKKYKDPWKQLKVVYNTNKGKQFTAEEDRFLICMTHQVGYGNWDALK 438
LT EE + KE L +GFS+WS++DF+ F++ CE YGRN IA+E E KT EEV Y+ VF ERY+E++ +++++ +IERGE ++ +RD ++ A+ K+ +YK+PW +LK+ Y NKGK + E DRF+ICM H++GYGNW+ LK
Sbjct: 15 LTAEELEEKERLLEEGFSSWSRRDFNTFIRACEKYGRNDIMSIASEMEGKTEEEVERYAKVFKERYKELNDYDRIIKNIERGEARISRRDEIMKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYGNWEELK 160
BLAST of mRNA_M-pyrifera_M_contig111764.2457.1 vs. uniprot
Match: A0A1I9Q1V6_9INSE (SANT domain-containing protein (Fragment) n=10 Tax=Cloeon TaxID=197151 RepID=A0A1I9Q1V6_9INSE) HSP 1 Score: 158 bits (400), Expect = 5.630e-46 Identity = 77/139 (55.40%), Postives = 103/139 (74.10%), Query Frame = 1
Query: 1 LTDEEEQRKEELSTQGFSNWSKKDFSIFLKCCEVYGRNSHALIAAETETKTPEEVAEYSAVFWERYEEVDGWEKMLTHIERGEVKLQKRDAMINALSAKMKKYKDPWKQLKVVYNTNKGKQFTAEEDRFLICMTHQVGY 417
LTDEE+ KE L T GF+NWSK+DF+ F+K E YGR+ IA E E KTPEEV EYSAVFW+R E+ ++++T IERGE K+Q+R ++ AL AKM +Y+ P+ QL++ Y TNKGK +T EEDRFL+CM H++G+
Sbjct: 26 LTDEEQTEKERLLTTGFTNWSKRDFNQFIKANEKYGRDDIDNIAREVEGKTPEEVMEYSAVFWDRCSELQDIDRIMTQIERGETKIQRRASIKKALDAKMARYRAPFHQLRIAYGTNKGKNYTEEEDRFLVCMLHKLGF 164
BLAST of mRNA_M-pyrifera_M_contig111764.2457.1 vs. uniprot
Match: A0A250X559_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250X559_9CHLO) HSP 1 Score: 168 bits (425), Expect = 1.710e-45 Identity = 74/146 (50.68%), Postives = 110/146 (75.34%), Query Frame = 1
Query: 1 LTDEEEQRKEELSTQGFSNWSKKDFSIFLKCCEVYGRNSHALIAAETETKTPEEVAEYSAVFWERYEEVDGWEKMLTHIERGEVKLQKRDAMINALSAKMKKYKDPWKQLKVVYNTNKGKQFTAEEDRFLICMTHQVGYGNWDALK 438
L+ EE++ + L QGF W+++DF++F++ CE +GRN+ IA E E K+ EEV +YS VFW+R++E+ WEK+ +IERGE K+QK NA+++K+ KYK+PW++LK+VY NKGK +T +EDRF++CMTH++GYG WD LK
Sbjct: 807 LSQEEDEERMRLLEQGFGGWTRRDFNMFVRACEKFGRNALTQIAGEIEGKSEEEVRQYSKVFWQRHKELSDWEKVTKNIERGEQKIQKFHDNQNAIASKLAKYKNPWQELKLVYGPNKGKAYTEDEDRFILCMTHKLGYGQWDELK 952
BLAST of mRNA_M-pyrifera_M_contig111764.2457.1 vs. uniprot
Match: A0A835YLR3_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835YLR3_9CHLO) HSP 1 Score: 167 bits (423), Expect = 3.190e-45 Identity = 72/146 (49.32%), Postives = 110/146 (75.34%), Query Frame = 1
Query: 1 LTDEEEQRKEELSTQGFSNWSKKDFSIFLKCCEVYGRNSHALIAAETETKTPEEVAEYSAVFWERYEEVDGWEKMLTHIERGEVKLQKRDAMINALSAKMKKYKDPWKQLKVVYNTNKGKQFTAEEDRFLICMTHQVGYGNWDALK 438
L++EE +E L +GF W+K+DF+ F++ CE YGR + IAAE + KT +EV Y+ VFW+R+ E+ WEK++ +IERGE K+Q++ ++NA++ K+++YK+PW++LK+ Y NKGK +T EEDRF++CM H++GYGNWD LK
Sbjct: 828 LSEEELAEREALLEEGFKEWTKRDFNAFVRACEKYGRENVPQIAAEVDGKTEDEVRAYAKVFWKRHRELADWEKVIKNIERGEQKIQRQQDIMNAIAGKLERYKNPWQELKIQYGANKGKAYTEEEDRFILCMVHKLGYGNWDDLK 973
BLAST of mRNA_M-pyrifera_M_contig111764.2457.1 vs. uniprot
Match: UPI00053CA22F (ISWI chromatin-remodeling complex ATPase CHR11-like n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053CA22F) HSP 1 Score: 158 bits (399), Expect = 3.570e-45 Identity = 72/146 (49.32%), Postives = 104/146 (71.23%), Query Frame = 1
Query: 1 LTDEEEQRKEELSTQGFSNWSKKDFSIFLKCCEVYGRNSHALIAAETETKTPEEVAEYSAVFWERYEEVDGWEKMLTHIERGEVKLQKRDAMINALSAKMKKYKDPWKQLKVVYNTNKGKQFTAEEDRFLICMTHQVGYGNWDALK 438
LT EE + KE L +GFS WS++DF+ FL+ CE YGRN IA E E KT EEV Y+ F ERY+E++ +++++ +IERGE ++ ++D ++ A+ K+ +YK+PW +LKV Y NKGK + + DRF+ICM H++GYGNWD LK
Sbjct: 52 LTAEEVEEKERLLEEGFSTWSRRDFNTFLRACEKYGRNDIKSIATEMEGKTEEEVERYAKAFKERYKELNDYDRIIKNIERGEARISRKDEIMKAIGKKLDRYKNPWLELKVQYGQNKGKLYNEDCDRFMICMVHKLGYGNWDELK 197 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig111764.2457.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig111764.2457.1 >prot_M-pyrifera_M_contig111764.2457.1 ID=prot_M-pyrifera_M_contig111764.2457.1|Name=mRNA_M-pyrifera_M_contig111764.2457.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=147bp LTDEEEQRKEELSTQGFSNWSKKDFSIFLKCCEVYGRNSHALIAAETETKback to top mRNA from alignment at M-pyrifera_M_contig111764:8..448- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig111764.2457.1 ID=mRNA_M-pyrifera_M_contig111764.2457.1|Name=mRNA_M-pyrifera_M_contig111764.2457.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=441bp|location=Sequence derived from alignment at M-pyrifera_M_contig111764:8..448- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig111764:8..448- >mRNA_M-pyrifera_M_contig111764.2457.1 ID=mRNA_M-pyrifera_M_contig111764.2457.1|Name=mRNA_M-pyrifera_M_contig111764.2457.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=882bp|location=Sequence derived from alignment at M-pyrifera_M_contig111764:8..448- (Macrocystis pyrifera P11B4 male)back to top |