mRNA_M-pyrifera_M_contig11173.2450.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig11173.2450.1
Unique NamemRNA_M-pyrifera_M_contig11173.2450.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig11173.2450.1 vs. uniprot
Match: D7FRE2_ECTSI (Checkpoint protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRE2_ECTSI)

HSP 1 Score: 323 bits (827), Expect = 1.560e-109
Identity = 166/185 (89.73%), Postives = 173/185 (93.51%), Query Frame = 1 
Query:    1 MRFKAKIVQDKLLVFAGLIGAIEKIGALCVVHLTEETVHLSVQESGSEGVDVYAELQQDMLFHEYRIESRAGNEILFEANASLLLQSLNSGRTAPTCQIKLAKRAGQPCLSIETRALEIDVVHDIPVKVMPANEASYYRPPKVQMPQVQLELPRQRSLRTVIDRMKGIDKFLYVDADMGGQLVFR 555
            MRFKAKIVQDKLL FAG+IGAIEKIG  CVVHLTE  VHLSVQESGSEGVDVYAEL QDMLFHEYRIESRAGN ILFEANASLLLQ+LNSG+T+PTCQIKLAKRAGQPCLSIETRALEI+VVHDIPVKVMPANEA YY PPKV  PQVQLELPRQRSLRTV+DRMK IDKFL+VDADMGGQLVFR
Sbjct:    1 MRFKAKIVQDKLLAFAGVIGAIEKIGTACVVHLTETRVHLSVQESGSEGVDVYAELIQDMLFHEYRIESRAGNAILFEANASLLLQALNSGKTSPTCQIKLAKRAGQPCLSIETRALEIEVVHDIPVKVMPANEAEYYLPPKVHSPQVQLELPRQRSLRTVVDRMKAIDKFLFVDADMGGQLVFR 185
[Close]
BLAST of mRNA_M-pyrifera_M_contig11173.2450.1 vs. uniprot
Match: A0A7S3YAY1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YAY1_HETAK)

HSP 1 Score: 196 bits (498), Expect = 2.020e-60
Identity = 97/185 (52.43%), Postives = 138/185 (74.59%), Query Frame = 1 
Query:    1 MRFKAKIVQDKLLVFAGLIGAIEKIGALCVVHLTEETVHLSVQESGSEGVDVYAELQQDMLFHEYRIESRAGNEILFEANASLLLQSLNSGRTAPTCQIKLAKRAGQPCLSIETRALEIDVVHDIPVKVMPANEASYYRPPKVQMPQVQLELPRQRSLRTVIDRMKGIDKFLYVDADMGGQLVFR 555
            MRFKAKI Q  L V +GLI  +EK+  +CV++LTE ++ +S++ES  + + V++E+ Q+ LF +YRIES + N IL E   + L ++L SGR AP CQ+KLAKR G+PCL++ETRALE+D+ HD+PVK++   +  ++  P+V  PQVQLELPR RS RTVIDR+KGI++ +Y+DADM G + FR
Sbjct:    2 MRFKAKIGQASLGVLSGLISILEKVSQVCVIYLTESSMRISIKES-QDDIQVFSEISQERLFTDYRIESLSNNCILLEVGTANLGRALASGRRAPACQLKLAKRGGRPCLAVETRALEVDIAHDLPVKLLRPGDVRFHLAPEVPRPQVQLELPRGRSFRTVIDRVKGINQHVYIDADMSGTITFR 185
[Close]
BLAST of mRNA_M-pyrifera_M_contig11173.2450.1 vs. uniprot
Match: A0A7S2SUZ2_9STRA (Checkpoint protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUZ2_9STRA)

HSP 1 Score: 187 bits (475), Expect = 1.970e-55
Identity = 97/187 (51.87%), Postives = 131/187 (70.05%), Query Frame = 1 
Query:    1 MRFKAKIVQDKLLVFAGLIGAIEKIGALCVVHLTEETVHLSVQESGSEGVDV--YAELQQDMLFHEYRIESRAGNEILFEANASLLLQSLNSGRTAPTCQIKLAKRAGQPCLSIETRALEIDVVHDIPVKVMPANEASYYRPPKVQMPQVQLELPRQRSLRTVIDRMKGIDKFLYVDADMGGQLVFR 555
            MRFKAK+  +KL VF G+   +EKIG L VVHL++ ++ L ++    +G DV  ++ L+Q  LFH++RIES++GN IL +     LL +L+S R AP CQ+KL KR GQ  L +ETRALE+DV+HDIPV VM A+E  YY PP V  PQVQLELP  R+L+TVIDR+K I +++Y+  +M G L  R
Sbjct:   44 MRFKAKLSNEKLGVFQGVAATLEKIGPLGVVHLSDTSIQLCIRNDSGQGDDVLAFSALEQKELFHDWRIESQSGNCILLQLTLQNLLDALHSARNAPQCQLKLTKRNGQAALCLETRALEVDVIHDIPVTVMRASEYQYYCPPDVPQPQVQLELPMSRNLKTVIDRLKNISRYIYLHGEMTGALTLR 230
[Close]
BLAST of mRNA_M-pyrifera_M_contig11173.2450.1 vs. uniprot
Match: A0A7S1TZY9_9STRA (Checkpoint protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZY9_9STRA)

HSP 1 Score: 174 bits (440), Expect = 9.280e-51
Identity = 95/189 (50.26%), Postives = 124/189 (65.61%), Query Frame = 1 
Query:    1 MRFKAKIVQDKLLVFAGLIGAIEKIGA----LCVVHLTEETVHLSVQESGSEGVDVYAELQQDMLFHEYRIESRAGNEILFEANASLLLQSLNSGRTAPTCQIKLAKRAGQPCLSIETRALEIDVVHDIPVKVMPANEASYYRPPKVQMPQVQLELPRQRSLRTVIDRMKGIDKFLYVDADMGGQLVFR 555
            MRFKA++ QD LLV  G+I  +EK  A      ++HL+     L++  + +E   V+AEL  D LF EYRIES++ + IL EA  + L ++  SGR AP C +KL KR GQPCL +ETRALE+DV HDIPVKV+ A E   Y PP+V  P VQLELP  R LRTV+DR+K  D+++ +D DM G L  R
Sbjct:    1 MRFKARLFQDMLLVVEGVIMCLEKATAGATPTVLLHLSPGGAKLALPTASTEEPQVFAELAADKLFAEYRIESQSDDCILLEAGLANLARAFRSGRAAPLCLLKLTKRRGQPCLCLETRALEVDVTHDIPVKVLKAAEIEAYAPPEVPAPSVQLELPASRQLRTVVDRLKPFDRYVSLDGDMHGSLTLR 189
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BLAST of mRNA_M-pyrifera_M_contig11173.2450.1 vs. uniprot
Match: A0A4D9CSQ4_9STRA (Checkpoint protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CSQ4_9STRA)

HSP 1 Score: 168 bits (426), Expect = 9.770e-49
Identity = 82/185 (44.32%), Postives = 127/185 (68.65%), Query Frame = 1 
Query:    1 MRFKAKIVQDKLLVFAGLIGAIEKIGALCVVHLTEETVHLSVQESGSEGVDVYAELQQDMLFHEYRIESRAGNEILFEANASLLLQSLNSGRTAPTCQIKLAKRAGQPCLSIETRALEIDVVHDIPVKVMPANEASYYRPPKVQMPQVQLELPRQRSLRTVIDRMKGIDKFLYVDADMGGQLVFR 555
            M+F+A +    L +  G+    E+ G  C+++L+E ++  +  + GS+ V  ++E+QQ+ +F EYRI S A N ILFE   S L+++ +S +TA   +IKLAKRAGQPC+ +E RAL+++++H++P++VM A +  YY PP V MP+VQLELP  RS+RTV++R K +D+F +VD DM G L  R
Sbjct:    1 MKFRAGLAAKDLGILNGVAQCFERFGPSCLIYLSERSIRFASPKLGSDEVRAFSEIQQEKVFSEYRIASLANNSILFEIGLSNLIKAFSSAKTAHFVRIKLAKRAGQPCICLEARALDMELLHEVPIRVMRAADIQYYMPPDVAMPRVQLELPYNRSMRTVLERFKIMDRFCFVDGDMSGALRLR 185
[Close]
BLAST of mRNA_M-pyrifera_M_contig11173.2450.1 vs. uniprot
Match: W7TDG5_9STRA (Checkpoint protein hus1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TDG5_9STRA)

HSP 1 Score: 144 bits (362), Expect = 5.970e-40
Identity = 70/163 (42.94%), Postives = 112/163 (68.71%), Query Frame = 1 
Query:    1 MRFKAKIVQDKLLVFAGLIGAIEKIGALCVVHLTEETVHLSVQESGSEGVDVYAELQQDMLFHEYRIESRAGNEILFEANASLLLQSLNSGRTAPTCQIKLAKRAGQPCLSIETRALEIDVVHDIPVKVMPANEASYYRPPKVQMPQVQLELPRQRSLRTVID 489
            M+F+A +    L    G+    E+ G  C+++L+E ++  +  + GS+ V  ++E+QQ+ +F EYRI S A N ILFE   S L+++ +S +TA   ++KLAKRAGQPC+ +E RAL+++++H++P++VM A +  YY PP V MP+VQLELP  RS+RTV++
Sbjct:    1 MKFRAGLAAKDLGNLNGVAQCFERFGPSCLIYLSERSIRFASPKLGSDEVRAFSEIQQEKVFSEYRIASLANNSILFEIGLSNLIKAFSSAKTAHFVRMKLAKRAGQPCICLEARALDMELLHEVPIRVMRAADIQYYMPPDVAMPRVQLELPYNRSMRTVLE 163
[Close]
BLAST of mRNA_M-pyrifera_M_contig11173.2450.1 vs. uniprot
Match: A0A7R9U1B3_9STRA (Checkpoint protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U1B3_9STRA)

HSP 1 Score: 127 bits (319), Expect = 1.040e-33
Identity = 59/96 (61.46%), Postives = 73/96 (76.04%), Query Frame = 1 
Query:  268 SGRTAPTCQIKLAKRAGQPCLSIETRALEIDVVHDIPVKVMPANEASYYRPPKVQMPQVQLELPRQRSLRTVIDRMKGIDKFLYVDADMGGQLVFR 555
            SGRTAP CQ+KL KR GQPCL +ETRALE+DV HDIPVKV+ A+E   Y PP+V  P VQLEL + R LRT++DR+K  DK+LY+D+ M G +  R
Sbjct:    2 SGRTAPLCQLKLTKRGGQPCLCLETRALEVDVTHDIPVKVLKASEIEAYAPPEVPSPTVQLELMQSRQLRTIVDRLKVFDKYLYIDSSMAGNMTLR 97
[Close]
BLAST of mRNA_M-pyrifera_M_contig11173.2450.1 vs. uniprot
Match: H3H3X3_PHYRM (Checkpoint protein n=23 Tax=Peronosporaceae TaxID=4777 RepID=H3H3X3_PHYRM)

HSP 1 Score: 127 bits (318), Expect = 1.680e-32
Identity = 68/191 (35.60%), Postives = 112/191 (58.64%), Query Frame = 1 
Query:    1 MRFKAKIVQDKLLVFAGLIGAIEKIG------ALCVVHLTEETVHLSVQESGSEGVDVYAELQQDMLFHEYRIESRAGNEILFEANASLLLQSLNSGRTAPTCQIKLAKRAGQPCLSIETRALEIDVVHDIPVKVMPANEASYYRPPKVQMPQVQLELPRQRSLRTVIDRMKGIDKFLYVDADMGGQLVFR 555
            MRF+  + +D L V   +  +  ++G      A CV  LT ET+ ++++  G+E +  +A LQ   LFH+  ++SRA N I F  +     Q+L SG+ A    ++L KR G   L + TRA++ID+V  IP++V+P +   +YR P V  PQ+ +E+P  R+LR+++DR+K + K + V+A   G L+ R
Sbjct:    1 MRFRGTLAKDALAVLLDVAQSFARLGSQSSAKANCVFTLTPETLSIALKSGGAEELQSFARLQVGRLFHDVVVQSRAENHIGFLCDVRHFQQALTSGKDASAVMLRLLKRDGSNFLCLRTRAVDIDIVQSIPIEVLPMSTVEHYREPSVPAPQIAIEMPPLRALRSIVDRLKAMHKTMTVEASKTGTLILR 191
[Close]
BLAST of mRNA_M-pyrifera_M_contig11173.2450.1 vs. uniprot
Match: A0A3M6VA71_9STRA (Checkpoint protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VA71_9STRA)

HSP 1 Score: 118 bits (295), Expect = 4.340e-29
Identity = 65/191 (34.03%), Postives = 109/191 (57.07%), Query Frame = 1 
Query:    1 MRFKAKIVQDKLLVFAGLIGAIEKIGAL------CVVHLTEETVHLSVQESGSEGVDVYAELQQDMLFHEYRIESRAGNEILFEANASLLLQSLNSGRTAPTCQIKLAKRAGQPCLSIETRALEIDVVHDIPVKVMPANEASYYRPPKVQMPQVQLELPRQRSLRTVIDRMKGIDKFLYVDADMGGQLVFR 555
            MRF+  + +D L V   +  +  ++G+       CV  LT ET+ ++++  G+E +  +A LQ   LFH+Y + S+A N I F  +     Q+L+SG+ A    ++L KR G   L + TRA++ID+V  IP+ V+  +   +Y+ P V  PQ+ +E+P  R+LR+++DR+K + K L V     G L+ R
Sbjct:    1 MRFRGTLAKDALAVLLDVAQSFARLGSQNNAKTNCVFTLTPETLSIALKCGGTEELQSFARLQTRRLFHDYVVHSQANNHIYFLCDVRHFQQALSSGKDASGVMLRLLKRDGNNFLCLRTRAVDIDIVQSIPITVLAMSTVEHYKEPSVPAPQIAIEMPPLRALRSIVDRLKVMHKTLTVKISKMGTLILR 191
[Close]
BLAST of mRNA_M-pyrifera_M_contig11173.2450.1 vs. uniprot
Match: A0A0P1B5S5_PLAHL (Checkpoint protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B5S5_PLAHL)

HSP 1 Score: 117 bits (293), Expect = 8.380e-29
Identity = 62/191 (32.46%), Postives = 112/191 (58.64%), Query Frame = 1 
Query:    1 MRFKAKIVQDKLLVFAGLIGAIEKIGAL------CVVHLTEETVHLSVQESGSEGVDVYAELQQDMLFHEYRIESRAGNEILFEANASLLLQSLNSGRTAPTCQIKLAKRAGQPCLSIETRALEIDVVHDIPVKVMPANEASYYRPPKVQMPQVQLELPRQRSLRTVIDRMKGIDKFLYVDADMGGQLVFR 555
            MRF+  + +D L+V   +  +  ++G+       CV  LT ET+ ++++  G+E +  +A LQ   LFH+  ++SRA N I F  +     Q+L SG+ A    ++L KR G   L + TRA++ID++  IP++V+  +   +Y+ P V  P + +E+P  R+LR+++D++KG+ K + V+A   G ++ R
Sbjct:    1 MRFRGTLAKDALVVLLDIAQSFVRLGSQSSAKTNCVFTLTLETLSIALKSGGAEELQSFARLQTTRLFHDVVVQSRAENHIGFLCDMRHFQQALTSGKDASAVMLRLLKRDGSNFLCLRTRAVDIDIIQSIPIEVLAMSTIEHYQEPCVPAPDIAIEMPPLRALRSIVDKLKGMHKTMSVEASRMGTVILR 191
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11173.2450.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRE2_ECTSI1.560e-10989.73Checkpoint protein n=1 Tax=Ectocarpus siliculosus ... [more]
A0A7S3YAY1_HETAK2.020e-6052.43Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2SUZ2_9STRA1.970e-5551.87Checkpoint protein n=1 Tax=Rhizochromulina marina ... [more]
A0A7S1TZY9_9STRA9.280e-5150.26Checkpoint protein n=2 Tax=Phaeomonas parva TaxID=... [more]
A0A4D9CSQ4_9STRA9.770e-4944.32Checkpoint protein n=1 Tax=Nannochloropsis salina ... [more]
W7TDG5_9STRA5.970e-4042.94Checkpoint protein hus1 n=1 Tax=Nannochloropsis ga... [more]
A0A7R9U1B3_9STRA1.040e-3361.46Checkpoint protein n=1 Tax=Pinguiococcus pyrenoido... [more]
H3H3X3_PHYRM1.680e-3235.60Checkpoint protein n=23 Tax=Peronosporaceae TaxID=... [more]
A0A3M6VA71_9STRA4.340e-2934.03Checkpoint protein n=2 Tax=Peronospora effusa TaxI... [more]
A0A0P1B5S5_PLAHL8.380e-2932.46Checkpoint protein n=1 Tax=Plasmopara halstedii Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig11173contigM-pyrifera_M_contig11173:4239..9922 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score325.9
Seed ortholog evalue1.3e-86
Seed eggNOG ortholog2880.D7FRE2
Preferred nameHUS1
KEGG koko:K02870,ko:K10903,ko:K10996
KEGG Pathwayko03010,ko04218,map03010,map04218
KEGG ModuleM00177
Hectar predicted targeting categorysignal peptide
GOsGO:0000003,GO:0000075,GO:0000076,GO:0000077,GO:0000228,GO:0000278,GO:0000723,GO:0000724,GO:0000725,GO:0000785,GO:0000792,GO:0000793,GO:0000794,GO:0001932,GO:0003006,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0006139,GO:0006259,GO:0006275,GO:0006281,GO:0006289,GO:0006302,GO:0006310,GO:0006464,GO:0006468,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0006997,GO:0007049,GO:0007093,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007293,GO:0007338,GO:0007346,GO:0008150,GO:0008152,GO:0008156,GO:0009314,GO:0009411,GO:0009416,GO:0009566,GO:0009628,GO:0009653,GO:0009790,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010212,GO:0010389,GO:0010556,GO:0010558,GO:0010564,GO:0010605,GO:0010639,GO:0010948,GO:0010972,GO:0016043,GO:0016310,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019953,GO:0022402,GO:0022411,GO:0022412,GO:0022414,GO:0022607,GO:0030154,GO:0030717,GO:0030720,GO:0030896,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031399,GO:0031570,GO:0031573,GO:0031974,GO:0031981,GO:0032200,GO:0032268,GO:0032501,GO:0032502,GO:0032504,GO:0032991,GO:0033043,GO:0033313,GO:0033314,GO:0033554,GO:0034641,GO:0035038,GO:0035861,GO:0036211,GO:0040020,GO:0042325,GO:0042592,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0044703,GO:0044773,GO:0044774,GO:0044778,GO:0044818,GO:0045786,GO:0045835,GO:0045930,GO:0045934,GO:0046483,GO:0048468,GO:0048477,GO:0048519,GO:0048523,GO:0048609,GO:0048646,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051174,GO:0051179,GO:0051246,GO:0051276,GO:0051321,GO:0051445,GO:0051447,GO:0051598,GO:0051674,GO:0051704,GO:0051716,GO:0051726,GO:0051783,GO:0051784,GO:0060249,GO:0060255,GO:0061982,GO:0061988,GO:0065007,GO:0065008,GO:0070013,GO:0070192,GO:0070193,GO:0070194,GO:0070925,GO:0071214,GO:0071478,GO:0071479,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0090734,GO:0104004,GO:1901360,GO:1901564,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902749,GO:1902750,GO:1903046,GO:1903047,GO:1990421,GO:2000112,GO:2000113,GO:2000241,GO:2000242
EggNOG free text desc.meiotic DNA integrity checkpoint
EggNOG OGsKOG3999@1,KOG3999@2759
Ec32 ortholog descriptionCell cycle checkpoint, Hus1
Ec32 orthologEc-21_002610.2
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko03011,ko03400
Exons5
Model size555
Cds size555
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig11173.2450.1prot_M-pyrifera_M_contig11173.2450.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig11173 4239..9922 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815630.5564032-CDS-M-pyrifera_M_contig11173:4238..42871622815630.5564032-CDS-M-pyrifera_M_contig11173:4238..4287Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11173 4239..4287 +
1692277495.8413599-CDS-M-pyrifera_M_contig11173:4238..42871692277495.8413599-CDS-M-pyrifera_M_contig11173:4238..4287Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11173 4239..4287 +
1622815630.5730665-CDS-M-pyrifera_M_contig11173:6035..61601622815630.5730665-CDS-M-pyrifera_M_contig11173:6035..6160Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11173 6036..6160 +
1692277495.851571-CDS-M-pyrifera_M_contig11173:6035..61601692277495.851571-CDS-M-pyrifera_M_contig11173:6035..6160Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11173 6036..6160 +
1622815630.5849657-CDS-M-pyrifera_M_contig11173:7419..75901622815630.5849657-CDS-M-pyrifera_M_contig11173:7419..7590Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11173 7420..7590 +
1692277495.8593826-CDS-M-pyrifera_M_contig11173:7419..75901692277495.8593826-CDS-M-pyrifera_M_contig11173:7419..7590Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11173 7420..7590 +
1622815630.5992503-CDS-M-pyrifera_M_contig11173:8553..86491622815630.5992503-CDS-M-pyrifera_M_contig11173:8553..8649Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11173 8554..8649 +
1692277495.8672686-CDS-M-pyrifera_M_contig11173:8553..86491692277495.8672686-CDS-M-pyrifera_M_contig11173:8553..8649Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11173 8554..8649 +
1622815630.6121044-CDS-M-pyrifera_M_contig11173:9808..99221622815630.6121044-CDS-M-pyrifera_M_contig11173:9808..9922Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11173 9809..9922 +
1692277495.8754294-CDS-M-pyrifera_M_contig11173:9808..99221692277495.8754294-CDS-M-pyrifera_M_contig11173:9808..9922Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11173 9809..9922 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig11173.2450.1

>prot_M-pyrifera_M_contig11173.2450.1 ID=prot_M-pyrifera_M_contig11173.2450.1|Name=mRNA_M-pyrifera_M_contig11173.2450.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=185bp
MRFKAKIVQDKLLVFAGLIGAIEKIGALCVVHLTEETVHLSVQESGSEGV
DVYAELQQDMLFHEYRIESRAGNEILFEANASLLLQSLNSGRTAPTCQIK
LAKRAGQPCLSIETRALEIDVVHDIPVKVMPANEASYYRPPKVQMPQVQL
ELPRQRSLRTVIDRMKGIDKFLYVDADMGGQLVFR
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mRNA from alignment at M-pyrifera_M_contig11173:4239..9922+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig11173.2450.1 ID=mRNA_M-pyrifera_M_contig11173.2450.1|Name=mRNA_M-pyrifera_M_contig11173.2450.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=5684bp|location=Sequence derived from alignment at M-pyrifera_M_contig11173:4239..9922+ (Macrocystis pyrifera P11B4 male)
ATGAGATTCAAGGCGAAGATTGTCCAGGACAAGCTGCTGGTGTTCGCAGG
TAGGGGTATATACTCTGTCACCATCAAATCCGTACCGTATCAGCTAGAGA
GCAGTATGAACCCTTGTGGGATGTGCGAGGGGGGGAAAATGAAGAAAAAA
AGTTGACTTGAGAGGGGAAAAAGTGACGGAACCAATTGACGATTACGAGC
ATCGGCCCAACGAAACAGCTCGGGCACCGGGGTCGAAAATCCCATACCCT
ATAGAGGGTTTGAACCCAGCACCCTCCAGAGGGATTTGACCCGACTACCT
CCTTGACGTCTAAGCCCTCGAGAGGGCTCTCGAGAGGGCTCTCGAGAGGG
CTCTCGAGAGGGGTTGCGTACCCATAACCCTCCAGCGGGTGCAGGTGGGT
TTCTTAGCCGATGGGACACGTGTGTTGTGCCTGGGCACCATACACGGTTA
AGCGTCTGGTTTCGTCACGTATCGCAAAGTATCACTGGGGAAGGTAGTGA
TCAGAAGCAGATACAGCGTGCAAATATATATATAGGGGGATGCACGTTTT
TTTCAGGTCCATCGTGGGTTCTGCTTTTTACTACATATGCCCACCCTCAT
TGGCGTATCTCCAACCAGTTGCACCTTGCACGACACGCGCGTAGGTAGCG
CTACACTACCGCAAGGATGCGAGCCATCGCACTCCCCTATATAGACTCGA
CTTTCACAGCTCGGTTGCTCCACAACCAAGAGGCTGCGAGAACCGACTGA
CTCCGTCTCAGGAAAGCGTCTCAGCTACATATTTCTGTAGCCACCCTCTT
CTGTGTTGGCGCCCTCCCTGATGTGCATGGAGCAAGCGGGCTTTCAAGGT
CGGTCTAGGAGTGTGCGATTAGTCGCATCCTTGCAATACATCATATACAC
TCTAGACGGCTGGCGGATAAGTCAGCACACACCTCTCACCCCTGTGGTCG
CTTCACCCCGCCCCTAAAACAGCTTTTCGTACCAGGTACGTTGAGAATTT
GTAGTAGCAATTCCAGCCCGCTTGTCGCCCTCCCCAACCGCGTGTTGTTG
GTGTTGTTGTTGTTTTTTTTTCCATGACTTTACCACTGCCGTGTGTTTTA
TTTTGCCGGCACTGCTGTCCGCAAGAAGTGTTATGTGTACACTTGTATCA
AACGATCAATCTCCTGCGGTCTAAATCGTACCGGTACCGGCTCTCACGGT
TCGGTTCGGTGAGCGAAACAAGAACGCACAGGGTGTGTGCTCTGATGCTC
GTGGCATGGGCTTGGAGCGGTCGCACCCCGCAGCTGACGCTTTCCGGGGC
TTTGGCCTCCGCGAATGACCGCGGTGAACCCTGCACCCTCTTCCCTCGCC
CCTTTTGCCCCTTCCCCCTCCCGTCCCCTCCCCTCCCCTCCCTCGATGTC
GTACGTGCACTATGCCTCCCCCCGCTGGTGTTGGTGCTGATGGTGGTTGT
GGTGCTTTCGGCGGTACTGTACTGGTGTTGATGTTGGTGGTGTTGGTGTT
GGTGATGCTCGCTGTGTTGACGGTATTGATGTTGGCGTTTTGGTGTGTTG
GTGTCGCTGCTGGTTGCTGTTGCTGTTGCTGGTGGTTGTGGTGTTGGTGG
TGGTATTGTTGTTGGTGTTGGTGCTGCTGGTGGATATACTATTGTTGTTG
GTGGTGGCGTTTGTGATGTGGTGGTGTTGCTGGTGTTGGTATTGGTGTTG
GTGTTGGTGTTGGTGTTGGTGTTGGTATTGGTGTCGGTGTTGGTGTTGTT
GTTGGTGTTGGTGTTGGTGTTGGTGTTGGTTCTGATGGTGGTGACAGGCC
TGATAGGGGCGATCGAGAAGATCGGAGCGTTGTGTGTGGTGCACCTGACG
GAGGAGACGGTCCACCTCTCCGTGCAGGAGAGCGGATCGGAAGGGGTCGA
CGTCTACGCCGAGCTGCAGCAGGTAAGTCAGGCTTCAAGGGCAGAGACAG
AACTACGGGAACGGGGAGGAGAAATAGGAGGGAGAAAGGGAGAATTTAGG
GGTGGGAGGGAGTAGGAGGGGAGGTGGGGGGAGGGAAGGGAGGAAAGGGG
GGCAGGGCGGGCGGGGGGCGGGGTGAGGAGTGATACAGACGTGGCGTACT
CGTGTATGATTCCACGGGCTATTTCGTTGTTGACCGTTTATTGATTCAGA
AAGGACGTGTTATACCACGGCTACAGGAAGAGCAGTGTCGCCATGCAGCG
GTTGCCCAACCCCCTTGCGATGTCAGTAAACATTTTCGGGAAAGCTGCTT
TGGAATCAGCGTTGTCTCATATTGTCAGTGGCAGAAGGGTACAGAGAGGA
AGGGGGGGAAGGAGGTGTGCTGTAGATGCGTGGAGGGGGGGAGGGGTGGG
GCAGGGATCGGAGGGAAGAAACGGCTTGAATGGTTTGAGATGACAAGCCG
CTTGTGGGGCGGTTCCTTCTGGTGTGGTCTGAGAATTATGTTGGTGGTTG
CGCCGCATGCTTGAGTTTGATCCACGGAGCTGTGGGGGCCTTTTCCTGCT
CGTCATGTGGTGCATGGCGCGTATGAATATAATGTGTATCAGGTATGCAG
CATCTGGTGCGCGACATCATCCGGATTGTGTGTGGTATTCGTGAGGAGAG
TTACTTTGCCACCCCTTTGTTGCCTGCCTTGATCACGTGACCATTGACCA
TGCGTCCCTTTCGGGACGGAGAGGGACACTCTACGGAAGGTGAATAACTT
GATTTTTCGTTTTCTCGATACCGTTTGCGGCCAGCCCCAAGAGATCGATT
GTGGGCGCTGCGATCGTGCAAGCCTCACGCCGTGCTCGGTGGATAAAGTC
CACGCCCTCTGCACACTGTTTATGCCTGTTTATGCGGCCATTGCTCGTCC
TCCCGTGTCCTATATGACCCCCGACCCCCCCCTTCACGCTTGTCTCTGGC
TTCTCTCCCGCCCCCGTTTCTCCCCCCCCTCCTCCGTCAGTAATAAGCCA
ACAAGGGCCATGTGCTTATCCAAGCAAGTTTTGTCGAGTTCCTTTCTATG
CCGTACCATGCTTTCATGGATGCACTGTGAGCGCTCTACTCTGACTTGAT
CTGCTCTTTTCTGACCTGCTCTGCTTTCTCCTGCTCTCCATGCGATGCTC
TCGTTGTTATTGGTTATTTTGTTGCTGCTGTTGTTGTTGTTGTTGTTGTT
GTTTTTGTCTGCGCGGTCTCGTTTCTGGAAGGACATGTTGTTTCACGAGT
ACCGCATCGAGAGCAGGGCGGGCAACGAGATCCTGTTCGAGGCCAACGCG
TCGCTCCTCCTGCAGTCGCTCAACTCCGGCAGGACCGCTCCCACGTGCCA
GATCAAGCTGGCCAAGCGGGCGGGCCAGCCGTGCCTGTCCATTGAGACCA
GGGTGAGCAAAAAATCACACATTTTTAGTGCTTGGATAGCGCGGATTGGG
TTTGATTGGGTTGGGCTGGGGGTGCGTTGGGCTGCGCTAGGCTGGCTTTG
ATTGGGTCGAGTTCGGCGGAGTTGGGTTGGGTAGTAGCACAGAAGCACAG
CACGTGGCACAGCAGAGCACATTAGGACAGCGACGCATTATGTATAGCAC
AGACAGCAGGACAGACAGTAGCACAGCAGCACGGTAGCATCGCACAGCGA
TAAACCGGCACCACTGAAGCACTGCGCAGTCGAACAGCGCCGTAGCACAG
CAGTACAGCAGAACAGCACAGCAAGCACAGCAGTAACAACCCGCCCTGAC
GCTATCCTAAGGAAATACCGGTTGTATCCCCCCTGTACTGTACTGAGTAT
CAATTCCGTCATCGTTTCCCACCCTCTCCTTTGCAGCAATGCCGACTAAA
CTCCTCGATATTAACGTACAGCCCCTGCCCCCCCCCCGCACACACACACC
AATAAACAAATCGAATATCGACGCTGTTGTCCATGTGCAAGAAAGTCCGC
CTCCCACAAGCGGTTATTTGTAGGATGCAGCCTACCCTTCATGCGACTCG
CCAACCACCTCACCTCACGACGCTTCGCATAGCTTGGTGCGGGCAATGCT
TATGCCCGTTCGGTGAAAACTCGACGTGCTCCGTCCCGGCACTGTAGGGA
TGCGAGGGTCTATGGGCTTACGACTACGACCATGCATGGCATGACTTCCA
TGGCATAACTTCACGCCCTCGCCCCCCCCTGACGCTTCCCTAACGCATTA
CATGTCCTGTCAAACCCCTGAACGAGTACCAGGTGTACGTAAAGCCCCTT
TTTTTCTAACTCCTCGTCGTTTCCATTCTCTCATTTGCGGCTGCTGCGAC
TAAACGCCTCATTTTGACTGCGCAAACCCCGCTGACGGCGTGTTTGAACC
GCTCACGGTGGGAAGGCTCTGGAGATCGACGTGGTGCATGACATTCCCGT
GAAGGTTATGCCGGCTAACGAGGCCTCGTACTACCGCCCGCCGAAGGTTC
AAATGCCCCAGGTGCGCGTATGCCCGTCTATGTGCGTATCTATGTGGTTG
CATGTCCCGATGTATGTGCGTGCGTGTGCGTACATATGTACGTCCCTGCG
CGTTCATTCTCGTACGTGTACTACGCGTGTCTGTGTGCATGTATGTGCAT
GTAGTGCGTGTGCGCGTGTGTCGTGTATGTCTGTGCACGCGTGAGCGGAA
TCGGCAGAGGGACGGGGCCTGAGAGCGAGGGGGCGGGAGGGAGGGAGAGA
GGGAGGGAGTGGGGGTGGGTGGGGGGAAGGGGGGTTCATATACGGACTGA
TAGGAGCGACAAGGCGGTCCCGTACTTGTAGGTAGTCGCTGCTGCATGCG
AAGGTTGCTGAGGCGCGGCGGCTTACGTGAACCCTCCGCCGTGCGTCGAC
TCACCCGGTTGGCGTGCGTGCTGTGCCCGGTTCAATCCACCGGTGCTGTG
ACTCCTATCAGACGACAACGCTACCCGCTTTCCCATCACCCATGGAAGCT
AACCATCAATTCCTGGAAATATTCGGCGCGTTGGCGAGCGAAGTGGTCGC
TGCACGACAGCGCTGGAGTCCACCGCCACCGCCACCCCCGCCCCCTTTGC
CCACTTTCCACCCTCCACCCTTACCCCTTACGCCTCCTCCGCCCACCCTC
CGCCCCCCACCCCCGGCCACTACCCCCACCCCCCTTCGCCCACCCCCCAC
CTACCCCATGCTTCAGCGCCCCCCCCCCCCCGACGCGTTCCGCTAGCGGC
GGTCGCGTGTCGCCCGGATTTGAGCGTTTGACGTTTGGGGACTTGCTTGA
ACCGACGGAGGCAAGTCTGACTGACTCCGCTTTCCTCTTGACCTCTTGAA
TAACAACAGAAATGGCACAGCAGCTACTGTGCACCGATCGCTCTGTGCCA
ACAAAAAAAAGCGGCAAAGCGTCGTCCACCCCGTTCCCCTTCTCCCGACT
CCCCTAAATACGCCTCCGCCGCAACTGCTCTTGCTCTTCCTCTGTGCTCG
CTACGATACCTAATGCGGTTTGTCAAGGTCCCCCTCTCCCCCCTCCCCCA
CCCCCTCCCGTCTCCCCCACACCACATACCACACCAAACGCACTTCCGCC
GCGATGGCTCTGGCTGTTCTCCTGTGCTCAATATATATGTATATATTATG
TCCTCGCGCGGTTTGTGAAGGTCCAACTCGAGTTGCCGCGCCAGCGGTCT
CTTCGCACCGTGATCGACCGAATGAAGGGGATAGACAAGTTTCTCTACGT
TGACGCGGACATGGGAGGGCAGCTGGTGTTCAGG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig11173:4239..9922+

>mRNA_M-pyrifera_M_contig11173.2450.1 ID=mRNA_M-pyrifera_M_contig11173.2450.1|Name=mRNA_M-pyrifera_M_contig11173.2450.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1110bp|location=Sequence derived from alignment at M-pyrifera_M_contig11173:4239..9922+ (Macrocystis pyrifera P11B4 male)
ATGAGATTCAAGGCGAAGATTGTCCAGGACAAGCTGCTGGTGTTCGCAGA
TGAGATTCAAGGCGAAGATTGTCCAGGACAAGCTGCTGGTGTTCGCAGGC
CTGATAGGGGCGATCGAGAAGATCGGAGCGTTGTGTGTGGTGCACCTGAC
GGAGGAGACGGTCCACCTCTCCGTGCAGGAGAGCGGATCGGAAGGGGTCG
ACGTCTACGCCGAGCTGCAGCAGGCCTGATAGGGGCGATCGAGAAGATCG
GAGCGTTGTGTGTGGTGCACCTGACGGAGGAGACGGTCCACCTCTCCGTG
CAGGAGAGCGGATCGGAAGGGGTCGACGTCTACGCCGAGCTGCAGCAGGA
CATGTTGTTTCACGAGTACCGCATCGAGAGCAGGGCGGGCAACGAGATCC
TGTTCGAGGCCAACGCGTCGCTCCTCCTGCAGTCGCTCAACTCCGGCAGG
ACCGCTCCCACGTGCCAGATCAAGCTGGCCAAGCGGGCGGGCCAGCCGTG
CCTGTCCATTGAGACCAGGGACATGTTGTTTCACGAGTACCGCATCGAGA
GCAGGGCGGGCAACGAGATCCTGTTCGAGGCCAACGCGTCGCTCCTCCTG
CAGTCGCTCAACTCCGGCAGGACCGCTCCCACGTGCCAGATCAAGCTGGC
CAAGCGGGCGGGCCAGCCGTGCCTGTCCATTGAGACCAGGGCTCTGGAGA
TCGACGTGGTGCATGACATTCCCGTGAAGGTTATGCCGGCTAACGAGGCC
TCGTACTACCGCCCGCCGAAGGTTCAAATGCCCCAGGCTCTGGAGATCGA
CGTGGTGCATGACATTCCCGTGAAGGTTATGCCGGCTAACGAGGCCTCGT
ACTACCGCCCGCCGAAGGTTCAAATGCCCCAGGTCCAACTCGAGTTGCCG
CGCCAGCGGTCTCTTCGCACCGTGATCGACCGAATGAAGGGGATAGACAA
GTTTCTCTACGTTGACGCGGACATGGGAGGGCAGCTGGTGTTCAGGGTCC
AACTCGAGTTGCCGCGCCAGCGGTCTCTTCGCACCGTGATCGACCGAATG
AAGGGGATAGACAAGTTTCTCTACGTTGACGCGGACATGGGAGGGCAGCT
GGTGTTCAGG
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