mRNA_M-pyrifera_M_contig111698.2441.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig111698.2441.1
Unique NamemRNA_M-pyrifera_M_contig111698.2441.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig111698.2441.1 vs. uniprot
Match: A0A1S8VWX5_9FUNG (Uncharacterized protein n=1 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8VWX5_9FUNG)

HSP 1 Score: 162 bits (410), Expect = 8.190e-47
Identity = 83/133 (62.41%), Postives = 101/133 (75.94%), Query Frame = 1
Query:   16 RELRCDVLGGADAGIAVLSLDRSRAKNALGRVLMDEFRGALDRIRFDREIRAVVVQSVVDGVFCAGADLKERAEMSESEVGSFVVGLRGGFDLLAALPQPTVACIDGFALGGGLELAMACDLRVAGPKAVMGL 414
            RE   + L G DAGI VL+LDR  AKNALGR L+ +FR +++++ FD ++R V+V+S VDGVFCAGADLKERA M ++EV SFV  LR  F  L ALP PT+A IDGFALGGGLELA+  DLRVAG KA +GL
Sbjct:   45 RECTVEALQGTDAGIYVLTLDRPTAKNALGRNLLAQFRESINQMHFDEKVRVVIVKSAVDGVFCAGADLKERARMEQTEVASFVHSLRASFSELEALPMPTIAAIDGFALGGGLELALGTDLRVAGSKAKVGL 177          
BLAST of mRNA_M-pyrifera_M_contig111698.2441.1 vs. uniprot
Match: A0A0L0RVD8_ALLM3 (Uncharacterized protein n=2 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0RVD8_ALLM3)

HSP 1 Score: 160 bits (404), Expect = 7.220e-46
Identity = 82/133 (61.65%), Postives = 99/133 (74.44%), Query Frame = 1
Query:   16 RELRCDVLGGADAGIAVLSLDRSRAKNALGRVLMDEFRGALDRIRFDREIRAVVVQSVVDGVFCAGADLKERAEMSESEVGSFVVGLRGGFDLLAALPQPTVACIDGFALGGGLELAMACDLRVAGPKAVMGL 414
            RE   + L GAD GI +LSL+R +AKNAL R L+ EFR  LD +RFD + R +VV+S+VD VFCAGADLKERA M+ +EV +FV  LR  F  L ALP PT+A IDG ALGGGLE+A+ CDLRVAGP A +GL
Sbjct:   49 REAYIEKLAGADTGITILSLNRPKAKNALSRQLLAEFRECLDAVRFDADTRVLVVRSLVDRVFCAGADLKERATMNPTEVAAFVSSLRAAFSELEALPMPTIAAIDGAALGGGLEMALCCDLRVAGPGAKLGL 181          
BLAST of mRNA_M-pyrifera_M_contig111698.2441.1 vs. uniprot
Match: F4PCS4_BATDJ (Uncharacterized protein n=3 Tax=Batrachochytrium dendrobatidis TaxID=109871 RepID=F4PCS4_BATDJ)

HSP 1 Score: 156 bits (394), Expect = 1.520e-44
Identity = 80/136 (58.82%), Postives = 99/136 (72.79%), Query Frame = 1
Query:    7 SFGRELRCDVLGGADAGIAVLSLDRSRAKNALGRVLMDEFRGALDRIRFDREIRAVVVQSVVDGVFCAGADLKERAEMSESEVGSFVVGLRGGFDLLAALPQPTVACIDGFALGGGLELAMACDLRVAGPKAVMGL 414
            S  RE   + L G D GI VL+LDR  AKNALGR L+ +FR +++ +RF+ + R V+V+S VDGVFCAGADLKERA+M  SEV +FV  LR  F  L +LP PT+A +DGFALGGGLELA+  DLRV G KA +GL
Sbjct:   30 STARECNVEALHGNDKGIFVLTLDRPAAKNALGRTLLSQFRQSINDLRFNDQARVVIVKSAVDGVFCAGADLKERAQMQPSEVAAFVNSLRAAFSELESLPMPTIAVVDGFALGGGLELALCTDLRVGGQKAKVGL 165          
BLAST of mRNA_M-pyrifera_M_contig111698.2441.1 vs. uniprot
Match: UPI001FADA3A0 (enoyl-CoA hydratase-related protein n=5 Tax=unclassified Geothrix TaxID=2647902 RepID=UPI001FADA3A0)

HSP 1 Score: 152 bits (384), Expect = 2.150e-43
Identity = 81/133 (60.90%), Postives = 97/133 (72.93%), Query Frame = 1
Query:   19 ELRCDVLGGADAGIAVLSLDRSRAKNALGRVLMDEFRGALDRIRFDREIRAVVVQSVVDGVFCAGADLKERAEMSESEVGSFVVGLRGGFDLLAALPQPTVACIDGFALGGGLELAMACDLRVAGPKAVMGLV 417
            E+R + LGGADAG+ +L LDR  AKNALGR LM EFR AL  +RFD  +R VV+ S+V GVFCAGADLKERA M+ +E  +FV GLR  F  L  LP P +A ++G A GGGLELA+A DLRVAG  A +GLV
Sbjct:    2 EIRVERLGGADAGLVLLGLDRPEAKNALGRQLMAEFRQALADLRFDPAVRVVVMHSLVPGVFCAGADLKERAGMAPAETAAFVHGLRSAFTELEDLPVPVIAVLEGAAFGGGLELALAADLRVAGTDAKLGLV 134          
BLAST of mRNA_M-pyrifera_M_contig111698.2441.1 vs. uniprot
Match: UPI0018E706FC (enoyl-CoA hydratase domain-containing protein 2, mitochondrial isoform X1 n=1 Tax=Dermochelys coriacea TaxID=27794 RepID=UPI0018E706FC)

HSP 1 Score: 153 bits (386), Expect = 2.810e-43
Identity = 79/139 (56.83%), Postives = 105/139 (75.54%), Query Frame = 1
Query:    1 SESFGRELRCDVLGGADAGIAVLSLDRSRAKNALGRVLMDEFRGALDRIRFDREIRAVVVQSVVDGVFCAGADLKERAEMSESEVGSFVVGLRGGFDLLAALPQPTVACIDGFALGGGLELAMACDLRVAGPKAVMGLV 417
            S S G+E+  +V GG  +GIA + ++R+ AKN+LG+VL++E   AL+ +R D  IR VV +S V GVFCAGADLKERA+M+++EVG FV  LR   D +AALP PT+A I+G+ALGGGLELA+ACDLR+A   A MGL+
Sbjct:   29 SSSGGKEILVNVHGGESSGIAEILMNRAHAKNSLGKVLVNELFRALESLRCDERIRVVVFKSEVKGVFCAGADLKERAQMNDTEVGHFVHRLRSLMDEIAALPVPTIAAIEGYALGGGLELALACDLRIAASSAKMGLI 167          
BLAST of mRNA_M-pyrifera_M_contig111698.2441.1 vs. uniprot
Match: A0A8C8ZZQ4_PROSS (Enoyl-CoA hydratase domain containing 2 n=4 Tax=Lemuriformes TaxID=376915 RepID=A0A8C8ZZQ4_PROSS)

HSP 1 Score: 152 bits (385), Expect = 3.160e-43
Identity = 78/133 (58.65%), Postives = 100/133 (75.19%), Query Frame = 1
Query:   19 ELRCDVLGGADAGIAVLSLDRSRAKNALGRVLMDEFRGALDRIRFDREIRAVVVQSVVDGVFCAGADLKERAEMSESEVGSFVVGLRGGFDLLAALPQPTVACIDGFALGGGLELAMACDLRVAGPKAVMGLV 417
            E++   L G D GI+ + ++R RA+NALG VL+ E   AL R+R +R++R ++ +S V GVFCAGADLKER +MSE+EVG FV  LRG  D +AA P PT+A +DGFALGGGLELA+ACDLRVA   AVMGL+
Sbjct:   33 EIQVRALAGPDQGISEILMNRPRARNALGNVLVSELLDALARLREERQVRVLIFRSGVKGVFCAGADLKEREQMSEAEVGVFVQRLRGLMDDIAAFPAPTIAAMDGFALGGGLELALACDLRVAASSAVMGLI 165          
BLAST of mRNA_M-pyrifera_M_contig111698.2441.1 vs. uniprot
Match: A0A674I1Q2_TERCA (Enoyl-CoA hydratase domain-containing protein 2, mitochondrial-like n=16 Tax=Durocryptodira TaxID=1579337 RepID=A0A674I1Q2_TERCA)

HSP 1 Score: 152 bits (385), Expect = 3.970e-43
Identity = 78/139 (56.12%), Postives = 104/139 (74.82%), Query Frame = 1
Query:    1 SESFGRELRCDVLGGADAGIAVLSLDRSRAKNALGRVLMDEFRGALDRIRFDREIRAVVVQSVVDGVFCAGADLKERAEMSESEVGSFVVGLRGGFDLLAALPQPTVACIDGFALGGGLELAMACDLRVAGPKAVMGLV 417
            S S G+E+  +V GG  +GIA + ++R+ A+N+LGRVL++E    L+ +R D  IR VV +S V GVFCAGADLKERA+M+++EVG FV  LR   D +AALP PT+A I+G+ALGGGLELA+ACDLR+A   A MGL+
Sbjct:   29 SSSGGKEIMVNVHGGESSGIAEILMNRAHARNSLGRVLVNELFRVLESLRCDERIRVVVFKSEVKGVFCAGADLKERAQMNDTEVGHFVHRLRSLMDEIAALPMPTIAAIEGYALGGGLELALACDLRIAASSAKMGLI 167          
BLAST of mRNA_M-pyrifera_M_contig111698.2441.1 vs. uniprot
Match: A0A3D6EH44_9BACT (Enoyl-CoA hydratase n=1 Tax=Holophagaceae bacterium TaxID=2052165 RepID=A0A3D6EH44_9BACT)

HSP 1 Score: 150 bits (379), Expect = 1.210e-42
Identity = 81/133 (60.90%), Postives = 95/133 (71.43%), Query Frame = 1
Query:   19 ELRCDVLGGADAGIAVLSLDRSRAKNALGRVLMDEFRGALDRIRFDREIRAVVVQSVVDGVFCAGADLKERAEMSESEVGSFVVGLRGGFDLLAALPQPTVACIDGFALGGGLELAMACDLRVAGPKAVMGLV 417
            E+R + L G D GI +L LDR  AKNALGR LM EFR AL  +R D  +R VV+ S+V GVFCAGADLKERAEMS++E  +FV GLR  F  L  LP P +A ++G A GGGLELA+A DLRVAG  A MGLV
Sbjct:    2 EIRLERLAGPDTGIFLLGLDRPAAKNALGRQLMGEFRQALADLRVDPSVRVVVLHSLVPGVFCAGADLKERAEMSQAEAEAFVQGLRSAFTELEDLPMPVIAVLEGAAFGGGLELALAADLRVAGTGAKMGLV 134          
BLAST of mRNA_M-pyrifera_M_contig111698.2441.1 vs. uniprot
Match: A0A8C5SHS9_LATLA (Enoyl-CoA hydratase domain containing 2 n=18 Tax=Serpentes TaxID=8570 RepID=A0A8C5SHS9_LATLA)

HSP 1 Score: 151 bits (381), Expect = 1.700e-42
Identity = 78/134 (58.21%), Postives = 97/134 (72.39%), Query Frame = 1
Query:   16 RELRCDVLGGADAGIAVLSLDRSRAKNALGRVLMDEFRGALDRIRFDREIRAVVVQSVVDGVFCAGADLKERAEMSESEVGSFVVGLRGGFDLLAALPQPTVACIDGFALGGGLELAMACDLRVAGPKAVMGLV 417
            +E+   V G AD GIA + ++R  A+NALG+V +DE    LD + FD  IRAV+V+S V GVFCAGADLKERA MS++E   FV  LR   D +AALP PT+A IDG+ALGGGLE+A+ACDLRVA   A MGL+
Sbjct:   37 KEILLHVHGKADCGIAEIQMNRPHARNALGKVFVDELYEILDVLHFDESIRAVIVKSKVKGVFCAGADLKERARMSDAEADHFVQRLRSLMDNIAALPMPTIAAIDGYALGGGLEMALACDLRVAASSAKMGLI 170          
BLAST of mRNA_M-pyrifera_M_contig111698.2441.1 vs. uniprot
Match: UPI001FABCD0D (enoyl-CoA hydratase-related protein n=1 Tax=Geothrix sp. SG189 TaxID=2922721 RepID=UPI001FABCD0D)

HSP 1 Score: 149 bits (377), Expect = 2.430e-42
Identity = 82/133 (61.65%), Postives = 95/133 (71.43%), Query Frame = 1
Query:   19 ELRCDVLGGADAGIAVLSLDRSRAKNALGRVLMDEFRGALDRIRFDREIRAVVVQSVVDGVFCAGADLKERAEMSESEVGSFVVGLRGGFDLLAALPQPTVACIDGFALGGGLELAMACDLRVAGPKAVMGLV 417
            E+R + L G D GI +L LDR  AKNALGR LM EFR AL  +RFD   R VVV S+V GVFCAGADLKERA MS+ E  +FV GLRG F  L  LP P +A ++G A GGGLELA+A DLRVAG +A +GLV
Sbjct:    2 EVRLERLRGDDTGIVLLGLDRPAAKNALGRQLMAEFRQALADLRFDPAARVVVVHSLVPGVFCAGADLKERAGMSQGETVTFVHGLRGAFTELEDLPMPVIAVLEGAAFGGGLELALAADLRVAGAEAKLGLV 134          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig111698.2441.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1S8VWX5_9FUNG8.190e-4762.41Uncharacterized protein n=1 Tax=Batrachochytrium s... [more]
A0A0L0RVD8_ALLM37.220e-4661.65Uncharacterized protein n=2 Tax=Allomyces macrogyn... [more]
F4PCS4_BATDJ1.520e-4458.82Uncharacterized protein n=3 Tax=Batrachochytrium d... [more]
UPI001FADA3A02.150e-4360.90enoyl-CoA hydratase-related protein n=5 Tax=unclas... [more]
UPI0018E706FC2.810e-4356.83enoyl-CoA hydratase domain-containing protein 2, m... [more]
A0A8C8ZZQ4_PROSS3.160e-4358.65Enoyl-CoA hydratase domain containing 2 n=4 Tax=Le... [more]
A0A674I1Q2_TERCA3.970e-4356.12Enoyl-CoA hydratase domain-containing protein 2, m... [more]
A0A3D6EH44_9BACT1.210e-4260.90Enoyl-CoA hydratase n=1 Tax=Holophagaceae bacteriu... [more]
A0A8C5SHS9_LATLA1.700e-4258.21Enoyl-CoA hydratase domain containing 2 n=18 Tax=S... [more]
UPI001FABCD0D2.430e-4261.65enoyl-CoA hydratase-related protein n=1 Tax=Geothr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig111698contigM-pyrifera_M_contig111698:172..588 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score165.2
Seed ortholog evalue2.1e-38
Seed eggNOG ortholog28583.AMAG_10589T0
KEGG rclassRC02416
KEGG koko:K05607
KEGG ReactionR02085
KEGG Pathwayko00280,ko01100,map00280,map01100
KEGG ModuleM00036
Hectar predicted targeting categoryother localisation
EggNOG free text desc.hydratase
EggNOG OGs38CD5@33154,3NWFN@4751,COG1024@1,KOG1679@2759
EC4.2.1.18
COG Functional cat.I
Best tax levelFungi
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons1
Model size417
Cds size417
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815629.8746204-CDS-M-pyrifera_M_contig111698:171..5881622815629.8746204-CDS-M-pyrifera_M_contig111698:171..588Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig111698 172..588 +
1692277495.4497712-CDS-M-pyrifera_M_contig111698:171..5881692277495.4497712-CDS-M-pyrifera_M_contig111698:171..588Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig111698 172..588 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig111698.2441.1prot_M-pyrifera_M_contig111698.2441.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig111698 172..588 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig111698.2441.1

>prot_M-pyrifera_M_contig111698.2441.1 ID=prot_M-pyrifera_M_contig111698.2441.1|Name=mRNA_M-pyrifera_M_contig111698.2441.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=139bp
SESFGRELRCDVLGGADAGIAVLSLDRSRAKNALGRVLMDEFRGALDRIR
FDREIRAVVVQSVVDGVFCAGADLKERAEMSESEVGSFVVGLRGGFDLLA
ALPQPTVACIDGFALGGGLELAMACDLRVAGPKAVMGLV
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mRNA from alignment at M-pyrifera_M_contig111698:172..588+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig111698.2441.1 ID=mRNA_M-pyrifera_M_contig111698.2441.1|Name=mRNA_M-pyrifera_M_contig111698.2441.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=417bp|location=Sequence derived from alignment at M-pyrifera_M_contig111698:172..588+ (Macrocystis pyrifera P11B4 male)
TCGGAGTCGTTTGGTCGCGAGCTGCGTTGCGACGTGCTGGGGGGTGCGGA CGCTGGGATCGCGGTGCTGAGCCTGGACCGTTCTCGGGCGAAGAACGCGC TGGGGAGGGTGTTGATGGACGAATTCCGGGGAGCCTTGGATCGGATTCGA TTTGACCGCGAGATTCGTGCGGTGGTGGTGCAGTCGGTGGTGGACGGCGT GTTCTGCGCCGGCGCAGACCTGAAGGAGCGCGCGGAGATGAGCGAGAGCG AGGTGGGGAGTTTTGTGGTGGGGTTGCGGGGAGGGTTCGATTTGTTGGCC GCATTGCCTCAGCCCACAGTGGCTTGTATCGATGGATTTGCGCTGGGAGG AGGTTTGGAGCTCGCGATGGCCTGCGATCTACGAGTAGCAGGACCCAAGG CCGTGATGGGCTTGGTG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig111698:172..588+

>mRNA_M-pyrifera_M_contig111698.2441.1 ID=mRNA_M-pyrifera_M_contig111698.2441.1|Name=mRNA_M-pyrifera_M_contig111698.2441.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=834bp|location=Sequence derived from alignment at M-pyrifera_M_contig111698:172..588+ (Macrocystis pyrifera P11B4 male)
TCGGAGTCGTTTGGTCGCGAGCTGCGTTGCGACGTGCTGGGGGGTGCGGA
CGCTGGGATCGCGGTGCTGAGCCTGGACCGTTCTCGGGCGAAGAACGCGC
TGGGGAGGGTGTTGATGGACGAATTCCGGGGAGCCTTGGATCGGATTCGA
TTTGACCGCGAGATTCGTGCGGTGGTGGTGCAGTCGGTGGTGGACGGCGT
GTTCTGCGCCGGCGCAGACCTGAAGGAGCGCGCGGAGATGAGCGAGAGCG
AGGTGGGGAGTTTTGTGGTGGGGTTGCGGGGAGGGTTCGATTTGTTGGCC
GCATTGCCTCAGCCCACAGTGGCTTGTATCGATGGATTTGCGCTGGGAGG
AGGTTTGGAGCTCGCGATGGCCTGCGATCTACGAGTAGCAGGACCCAAGG
CCGTGATGGGCTTGGTGTCGGAGTCGTTTGGTCGCGAGCTGCGTTGCGAC
GTGCTGGGGGGTGCGGACGCTGGGATCGCGGTGCTGAGCCTGGACCGTTC
TCGGGCGAAGAACGCGCTGGGGAGGGTGTTGATGGACGAATTCCGGGGAG
CCTTGGATCGGATTCGATTTGACCGCGAGATTCGTGCGGTGGTGGTGCAG
TCGGTGGTGGACGGCGTGTTCTGCGCCGGCGCAGACCTGAAGGAGCGCGC
GGAGATGAGCGAGAGCGAGGTGGGGAGTTTTGTGGTGGGGTTGCGGGGAG
GGTTCGATTTGTTGGCCGCATTGCCTCAGCCCACAGTGGCTTGTATCGAT
GGATTTGCGCTGGGAGGAGGTTTGGAGCTCGCGATGGCCTGCGATCTACG
AGTAGCAGGACCCAAGGCCGTGATGGGCTTGGTG
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