mRNA_M-pyrifera_M_contig111694.2440.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig111694.2440.1 vs. uniprot
Match: A0A5A8CKW1_CAFRO (Uncharacterized protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CKW1_CAFRO) HSP 1 Score: 172 bits (436), Expect = 7.010e-48 Identity = 93/213 (43.66%), Postives = 124/213 (58.22%), Query Frame = 1
Query: 4 VFAYFKDLLYRFRSRGSPIEMLRTINPSEAALMDAASKLRVLVRLGGASFPPQIYYKIVTEAPICDVGAFAPRDSYIVPKLEHEKRRET-------------------------GKGEKGGGGEERVVEVVVGDRKVKAKTTHQGGWYQRVENNGWRPVIAQTIAEAQMDPVTKETAARAKPWHWSKLKRREHTRLRQKRKKIEWLRRLYKQG 567
FAYFK + RF+ +P+E+LR +NP+EA L+DAAS L V +RLGGASFPP +YYK+ T AP+CDVGAFAPR SY +L +R G G GG R+ + + GWY R ENNGWRPV +T+ EA+ DP+TK TAAR +PWHWS+L+R E + ++K ++ WL RLY++G
Sbjct: 89 AFAYFKGVCLRFQRDCTPVELLRVLNPTEAGLVDAASGLTVSLRLGGASFPPAVYYKVATLAPVCDVGAFAPR-SYATERLSLRERDADQVLGPAALASAKASLLALPSAPAGPGAGPTXXGGRGRLAGXXXXXXAAVSGAGERPGWYTRWENNGWRPVAVKTLQEAEADPLTKLTAARRQPWHWSRLQRNEDRQAKRKERRRRWLMRLYREG 300
BLAST of mRNA_M-pyrifera_M_contig111694.2440.1 vs. uniprot
Match: A0A7S1UGA4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UGA4_9STRA) HSP 1 Score: 156 bits (394), Expect = 9.220e-42 Identity = 89/193 (46.11%), Postives = 119/193 (61.66%), Query Frame = 1
Query: 1 RVFAYFKDLLYRFRSRGSPIEMLRTINPSEAALMDAASKLRVLVRLGGASFPPQIYYKIVTEAPICDVGAFAPRDSYIVPKLEHEKRRETGKGEKGGGGEE----RVVEVVVGDRKVKAKTTHQGGWYQRVENNGWRPVIAQTIAEAQMDPVTKETAARAKPWHWSKLKRREHTRLRQKRKKIEWLRRLYKQG 567
R++ Y++DL+ RF G P E+LR INP+EA L DAA+ + V RLGG SFPP IYYKI T P+ DVGAFAPRD V ++ G+E RV E + + K++ GWY+RVE NGWRPV Q I + +DPV KET AR+KP+HWS+L+R+E ++K KK WL+++Y G
Sbjct: 210 RIYRYYRDLI-RFFFAGDPKELLRAINPAEAQLFDAAAGVFVRFRLGGYSFPPTIYYKIFTHRPVADVGAFAPRDYTRVNDVDDM-------------GDEACAIRVGETLY-EAKLRGGDADGQGWYRRVECNGWRPVTLQVIQDKGLDPVYKETHARSKPFHWSRLQRQEDVLRKRKAKKRRWLQKMYMDG 387
BLAST of mRNA_M-pyrifera_M_contig111694.2440.1 vs. uniprot
Match: A0A6A3NXA8_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3NXA8_9STRA) HSP 1 Score: 151 bits (381), Expect = 1.820e-40 Identity = 85/200 (42.50%), Postives = 120/200 (60.00%), Query Frame = 1
Query: 1 RVFAYFKDLLYRFRSRGSPIEMLRTINPSEAALMDAASKLRVLVRLGGASFPPQIYYKIVTEAPICDVGAFAPRDSYIVPKL-----EHEKRRETGKGEKGGGGEERVVEVVVGDRKVKAKTTHQGG--WYQRVENNGWRPVIAQTIAEAQMDPVTKETAAR--AKPWHWSKLKRREHTRLRQKRKKIEWLRRLYKQGAV 573
R+F Y++DLL FRS G P MLR INPSEA+L+DA+ +V RLGG +FPP IYYKI T P+CD+GAF+P+D + + HEKRR T + VG+ +A+ + WY+R+ENNGWRPV A+ +AEA DP+ + T R +H+SKL R++ ++ KK W+++LY QG +
Sbjct: 169 RIFRYYRDLL-SFRSTGDPARMLRAINPSEASLLDASMGAQVRFRLGGLAFPPTIYYKIFTRKPVCDLGAFSPKDYTVARQAGPLSHSHEKRRTTF--------------IRVGNSYYRARQHAEDTRLWYRRLENNGWRPVTAKVLAEANADPIAQATGGRHAVSGFHYSKLVRQQDRERARRHKKRLWMQKLYTQGLL 353
BLAST of mRNA_M-pyrifera_M_contig111694.2440.1 vs. uniprot
Match: A0A662XTL0_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XTL0_9STRA) HSP 1 Score: 147 bits (372), Expect = 4.830e-39 Identity = 85/202 (42.08%), Postives = 117/202 (57.92%), Query Frame = 1
Query: 1 RVFAYFKDLLYRFRSRGSPIEMLRTINPSEAALMDAASKLRVLVRLGGASFPPQIYYKIVTEAPICDVGAFAPRDSYIV----PKLEHEKRRETGKGEKGGGGEERVVEVVVGDRKVKAKTTHQGG--WYQRVENNGWRPVIAQTIAEAQMDPVTKETAAR-----AKPWHWSKLKRREHTRLRQKRKKIEWLRRLYKQGAV 573
R+F Y++DLL FRS G P MLR INP EA L+DA+ +V RLGG FPP IYYKI T P+CD+GAF+P+D + P RR G+ E + VG+ +A+ Q WY+R+ENNGWRPV A+ +AEA DP+ + T R A +H+SKL R++ ++ KK W+++LY QG +
Sbjct: 170 RIFRYYRDLL-TFRSTGDPARMLRAINPGEAGLLDASMGAQVRFRLGGLVFPPTIYYKIFTRRPVCDLGAFSPKDYTLARQGAPVSHSHARRSRGQTES-------ATFIRVGNSYYRARQQEQDTRLWYRRLENNGWRPVTAKVLAEANADPIAQATGGRRAVAPAGGFHYSKLVRQQDRESARRHKKRLWMQKLYTQGLL 363
BLAST of mRNA_M-pyrifera_M_contig111694.2440.1 vs. uniprot
Match: A0A329S981_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329S981_9STRA) HSP 1 Score: 148 bits (373), Expect = 5.460e-39 Identity = 85/201 (42.29%), Postives = 121/201 (60.20%), Query Frame = 1
Query: 1 RVFAYFKDLLYRFRSRGSPIEMLRTINPSEAALMDAASKLRVLVRLGGASFPPQIYYKIVTEAPICDVGAFAPRDSYIVPKLE------HEKRRETGKGEKGGGGEERVVEVVVGDRKVKAKTTHQGG--WYQRVENNGWRPVIAQTIAEAQMDPVTKETAAR--AKPWHWSKLKRREHTRLRQKRKKIEWLRRLYKQGAV 573
R+F Y++DLL FRS G P MLR INPSEA+L+DA+ +V RLGG +FPP IYYKI T P+CD+GAF+P+D Y V + H KRR G + VG+ +A+ + WY+R+ENNGWRPV A+ +AEA DP+ + T +R +H+SK+ R++ ++ KK W+++LY QG +
Sbjct: 211 RIFRYYRDLL-TFRSTGDPARMLRAINPSEASLLDASMGAQVRFRLGGLAFPPTIYYKIFTRKPVCDLGAFSPKD-YTVARQSAPVSHSHVKRRP--------GQSVHTTYIRVGNSYYRARQQAEDTRLWYRRLENNGWRPVTAKVLAEANADPIAQATGSRRAVNGFHYSKVVRQQDRERARRHKKRLWMQKLYTQGLL 401
BLAST of mRNA_M-pyrifera_M_contig111694.2440.1 vs. uniprot
Match: H3GR87_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GR87_PHYRM) HSP 1 Score: 149 bits (376), Expect = 2.230e-38 Identity = 85/200 (42.50%), Postives = 119/200 (59.50%), Query Frame = 1
Query: 1 RVFAYFKDLLYRFRSRGSPIEMLRTINPSEAALMDAASKLRVLVRLGGASFPPQIYYKIVTEAPICDVGAFAPRDSYIVPKL-----EHEKRRETGKGEKGGGGEERVVEVVVGDRKVKAKTTHQGG--WYQRVENNGWRPVIAQTIAEAQMDPVTKETAARAKP--WHWSKLKRREHTRLRQKRKKIEWLRRLYKQGAV 573
R+F Y++DLL FRS G P MLR INPSEA+L+DA+ +V RLGG +FPP IYYKI T P+CD+GAF+P+D + + H KRR G + VG+ +AK + WY+R+ENNGWRPV A+ +AEA DP+ + T R +H+SKL R++ ++ KK W+++LY QG +
Sbjct: 138 RIFRYYRDLL-SFRSTGDPARMLRAINPSEASLLDASMGAQVRFRLGGLAFPPTIYYKIFTRKPVCDLGAFSPKDYTVARQAAPVSHSHAKRRP--------GQSVHTTYIRVGNSYYRAKQQAEDTRLWYRRLENNGWRPVTAKVLAEANADPIAQATGGRRAVGGFHYSKLVRQQDRERVRRHKKRLWMQKLYTQGLL 328
BLAST of mRNA_M-pyrifera_M_contig111694.2440.1 vs. uniprot
Match: A0A3F2S1R3_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S1R3_9STRA) HSP 1 Score: 142 bits (358), Expect = 6.260e-38 Identity = 83/200 (41.50%), Postives = 119/200 (59.50%), Query Frame = 1
Query: 1 RVFAYFKDLLYRFRSRGSPIEMLRTINPSEAALMDAASKLRVLVRLGGASFPPQIYYKIVTEAPICDVGAFAPRDSYIV----PKLEHEKRRETGKGEKGGGGEERVVEVVVGDRKVKAKTTHQGG--WYQRVENNGWRPVIAQTIAEAQMDPVTKETAARAKP-WHWSKLKRREHTRLRQKRKKIEWLRRLYKQGAVKA 579
RVF Y++DLL FR+ G MLR INPSEA+L+DA+ +V RLGG +FPP IYYKI T P+CD+GAF+P++ + P +RR GK + VG+ +A+ Q WY+R+ENNGWRPV A+ +AEA DP+ + T+ R +H SK+ R++ ++ KK W+++LY QG + A
Sbjct: 61 RVFRYYRDLL-AFRNTGDSGRMLRAINPSEASLLDASMGAQVRFRLGGLAFPPTIYYKIFTRKPVCDLGAFSPKNYTVARQSAPANHSHERRRKGKCVS-------TTFIRVGNSYYRARQQEQDTRLWYRRLENNGWRPVTAKVLAEANADPIAQATSERTVAGFHHSKIVRQQDRERARRHKKRLWMQKLYTQGLLTA 252
BLAST of mRNA_M-pyrifera_M_contig111694.2440.1 vs. uniprot
Match: A0A225X237_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X237_9STRA) HSP 1 Score: 142 bits (359), Expect = 1.240e-37 Identity = 77/196 (39.29%), Postives = 116/196 (59.18%), Query Frame = 1
Query: 1 RVFAYFKDLLYRFRSRGSPIEMLRTINPSEAALMDAASKLRVLVRLGGASFPPQIYYKIVTEAPICDVGAFAPRDSYIVPKLEHEKRRETGKGEKGGGGEERVVEVVVGDRKVKAKTTHQGG--WYQRVENNGWRPVIAQTIAEAQMDPVTKETAARA-KPWHWSKLKRREHTRLRQKRKKIEWLRRLYKQGAVKA 579
R+F Y++DLL FR+ G P MLR INPSEA+L+DA+ +V RLGG +FPP IYYKI T P+CD+G F+P++ + + + R + VG+ +A+ + WY R+ENNGWRPV A+ +AEA DP+ + T R + +H+SK+ R++ ++ KK W+++LY QG + A
Sbjct: 127 RIFRYYRDLL-TFRNTGDPARMLRAINPSEASLLDASMGAQVRFRLGGLTFPPTIYYKIFTRKPVCDLGTFSPKNYTVARQTAPSSHSHI---------KSRTTYIRVGNSYYRARQQAEDTRLWYHRLENNGWRPVTAKVLAEADADPIAQATGRRTVENFHYSKIVRQQDRERARRYKKRLWMQKLYSQGLLTA 312
BLAST of mRNA_M-pyrifera_M_contig111694.2440.1 vs. uniprot
Match: A0A0N7L5N7_PLAHL (IQ motif, EF-hand binding site n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L5N7_PLAHL) HSP 1 Score: 144 bits (364), Expect = 1.540e-37 Identity = 80/199 (40.20%), Postives = 120/199 (60.30%), Query Frame = 1
Query: 1 RVFAYFKDLLYRFRSRGSPIEMLRTINPSEAALMDAASKLRVLVRLGGASFPPQIYYKIVTEAPICDVGAFAPRDSYIVPK---LEHEKRRETGKGEKGGGGEERVVEVVVGDRKVKAKTTHQGG--WYQRVENNGWRPVIAQTIAEAQMDPVTKETAAR---AKPWHWSKLKRREHTRLRQKRKKIEWLRRLYKQGAV 573
R+F Y++DLL FR G P++MLR INPSEA+L+DA+ +V RLGG +FPP +YYKI T P+CD+G F+P+D I K + H + + + + + VG+ +A+ + WY R+ENNGWRPV A+ +AEA DP+T+ T +R +H+SKL R + ++ KK W+++LY QG +
Sbjct: 220 RIFQYYRDLL-TFRGTGDPVQMLRAINPSEASLLDASMSAQVRFRLGGLTFPPTVYYKIFTRKPVCDLGVFSPKDYTISRKSASVTHSQVKSR---------INQYLYIRVGNSYYRAQHQMEDTRLWYSRLENNGWRPVTAKVLAEANADPITRTTGSRYTIGGNYHYSKLVRLQDRERTRRNKKRLWMQKLYAQGLL 408
BLAST of mRNA_M-pyrifera_M_contig111694.2440.1 vs. uniprot
Match: K3WFF6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WFF6_GLOUD) HSP 1 Score: 141 bits (355), Expect = 3.440e-37 Identity = 78/196 (39.80%), Postives = 115/196 (58.67%), Query Frame = 1
Query: 1 RVFAYFKDLLYRFRSRGSPIEMLRTINPSEAALMDAASKLRVLVRLGGASFPPQIYYKIVTEAPICDVGAFAPRDSYIVPKLEHEKRRETGKGEKGGGGEERVVEVVVGDRKVKAKTTHQGG--WYQRVENNGWRPVIAQTIAEAQMDPVTKETAARAK--PWHWSKLKRREHTRLRQKRKKIEWLRRLYKQGAVK 576
R++ Y++DL+ F++ G P MLRTINPSEA L+DAA V RLGG +FPP IYYKI T +CDV AF+P+D + + ++ K + VG+ +AK Q WY+R+ENNGWRPV A+ +A+A DPV + T ++ +H+S L R++ +++ KK W+ +LY QG +K
Sbjct: 96 RIYRYYRDLI-TFQNTGDPARMLRTINPSEAGLLDAAMGAHVRFRLGGMAFPPTIYYKIFTRKAVCDVNAFSPKDYTLARQTMPHPHSKSKK---------HTCFIRVGNAYYRAKQAEQDTRFWYRRIENNGWRPVTAKVVADATNDPVAQATNRKSSVSTFHYSSLVRKQDAEKQRRLKKRMWMHKLYTQGLLK 281 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig111694.2440.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig111694.2440.1 >prot_M-pyrifera_M_contig111694.2440.1 ID=prot_M-pyrifera_M_contig111694.2440.1|Name=mRNA_M-pyrifera_M_contig111694.2440.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=193bp RVFAYFKDLLYRFRSRGSPIEMLRTINPSEAALMDAASKLRVLVRLGGASback to top mRNA from alignment at M-pyrifera_M_contig111694:3..581+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig111694.2440.1 ID=mRNA_M-pyrifera_M_contig111694.2440.1|Name=mRNA_M-pyrifera_M_contig111694.2440.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=579bp|location=Sequence derived from alignment at M-pyrifera_M_contig111694:3..581+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig111694:3..581+ >mRNA_M-pyrifera_M_contig111694.2440.1 ID=mRNA_M-pyrifera_M_contig111694.2440.1|Name=mRNA_M-pyrifera_M_contig111694.2440.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1158bp|location=Sequence derived from alignment at M-pyrifera_M_contig111694:3..581+ (Macrocystis pyrifera P11B4 male)back to top |