mRNA_M-pyrifera_M_contig111669.2434.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig111669.2434.1 vs. uniprot
Match: A0A517PLF6_9PLAN (Uncharacterized protein n=10 Tax=Gimesia TaxID=1649453 RepID=A0A517PLF6_9PLAN) HSP 1 Score: 410 bits (1055), Expect = 4.730e-136 Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 1
Query: 1 SRGWTEAGFQVYFNNKGSLNEKTKAPWILDEPSAFWDYRALQYYGELTDRGRRNADEIQIDYRIDISRPEYTRGELEGRGDLWVVSASAFQNYRRLVTDRMQRDGLRVWVYGTSNPVHESNRQLQAWAVDAWRYGATGLVPWQTVDKSGQALRKADQLGLFIFYQTPEGKTVIRHSARLKAYREAEQLIEYLTLVQ 588
SRGWTEAGFQVYFNNKGSLNEKTKAPWILDEPSAFWDYRALQYYGELTDRGRRNADEIQIDYRIDISRPEYTRGELEGRGDLWVVSASAFQNYRRLVTDRMQRDGLRVWVYGTSNPVHESNRQLQAWAVDAWRYGATGLVPWQTVDKSGQALRKADQLGLFIFYQTPEGKTVIRHSARLKAYREAEQLIEYLTLVQ
Sbjct: 631 SRGWTEAGFQVYFNNKGSLNEKTKAPWILDEPSAFWDYRALQYYGELTDRGRRNADEIQIDYRIDISRPEYTRGELEGRGDLWVVSASAFQNYRRLVTDRMQRDGLRVWVYGTSNPVHESNRQLQAWAVDAWRYGATGLVPWQTVDKSGQALRKADQLGLFIFYQTPEGKTVIRHSARLKAYREAEQLIEYLTLVQ 826
BLAST of mRNA_M-pyrifera_M_contig111669.2434.1 vs. uniprot
Match: A0A812PJG9_SYMMI (SigL protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812PJG9_SYMMI) HSP 1 Score: 394 bits (1011), Expect = 6.230e-126 Identity = 187/195 (95.90%), Postives = 192/195 (98.46%), Query Frame = 1
Query: 4 RGWTEAGFQVYFNNKGSLNEKTKAPWILDEPSAFWDYRALQYYGELTDRGRRNADEIQIDYRIDISRPEYTRGELEGRGDLWVVSASAFQNYRRLVTDRMQRDGLRVWVYGTSNPVHESNRQLQAWAVDAWRYGATGLVPWQTVDKSGQALRKADQLGLFIFYQTPEGKTVIRHSARLKAYREAEQLIEYLTLVQ 588
RGW++AGFQVYFNNKGSLNEKTKAPWILDEPSA+WDYRALQYYGELTDRGRRNA+EIQIDYRIDISRPEY RGEL GRGDLWVVSASAFQNYRRLVTDRMQRDGLRVWVYGTSNPVHESNRQLQAWAVDAWRYGATGLVPWQTVDKSGQALRKADQLGLFIF +TPEGKTVIRHSARLKAYREAEQLIEYLTLVQ
Sbjct: 1059 RGWSQAGFQVYFNNKGSLNEKTKAPWILDEPSAYWDYRALQYYGELTDRGRRNAEEIQIDYRIDISRPEYCRGELAGRGDLWVVSASAFQNYRRLVTDRMQRDGLRVWVYGTSNPVHESNRQLQAWAVDAWRYGATGLVPWQTVDKSGQALRKADQLGLFIFDKTPEGKTVIRHSARLKAYREAEQLIEYLTLVQ 1253
BLAST of mRNA_M-pyrifera_M_contig111669.2434.1 vs. uniprot
Match: A6CCV4_9PLAN (Uncharacterized protein n=5 Tax=Gimesia TaxID=1649453 RepID=A6CCV4_9PLAN) HSP 1 Score: 375 bits (963), Expect = 1.000e-122 Identity = 174/196 (88.78%), Postives = 188/196 (95.92%), Query Frame = 1
Query: 1 SRGWTEAGFQVYFNNKGSLNEKTKAPWILDEPSAFWDYRALQYYGELTDRGRRNADEIQIDYRIDISRPEYTRGELEGRGDLWVVSASAFQNYRRLVTDRMQRDGLRVWVYGTSNPVHESNRQLQAWAVDAWRYGATGLVPWQTVDKSGQALRKADQLGLFIFYQTPEGKTVIRHSARLKAYREAEQLIEYLTLVQ 588
SRGWTE GFQVYFNNKGSLNE+TKAPWILDEPS++WDYRALQYYGELTDRGRR A ++QIDYRIDISRPE+ RGEL GRGDLWVVS+SAFQNYRRL+TDRMQRDGL+VWVYGTSNPVHESNRQLQAWA+DAWRY ATGLVPWQTVDKSGQALR+ADQLGLFIF +TPEGKTVIRHS RLKA+REAEQLIEYLT+VQ
Sbjct: 593 SRGWTETGFQVYFNNKGSLNEQTKAPWILDEPSSYWDYRALQYYGELTDRGRRRASDVQIDYRIDISRPEFCRGELAGRGDLWVVSSSAFQNYRRLITDRMQRDGLQVWVYGTSNPVHESNRQLQAWALDAWRYAATGLVPWQTVDKSGQALRQADQLGLFIFDKTPEGKTVIRHSMRLKAFREAEQLIEYLTMVQ 788
BLAST of mRNA_M-pyrifera_M_contig111669.2434.1 vs. uniprot
Match: A0A5C6C113_9BACT (Uncharacterized protein n=1 Tax=Novipirellula galeiformis TaxID=2528004 RepID=A0A5C6C113_9BACT) HSP 1 Score: 342 bits (876), Expect = 1.770e-109 Identity = 157/194 (80.93%), Postives = 177/194 (91.24%), Query Frame = 1
Query: 4 RGWTEAGFQVYFNNKGSLNEKTKAPWILDEPSAFWDYRALQYYGELTDRGRRNADEIQIDYRIDISRPEYTRGELEGRGDLWVVSASAFQNYRRLVTDRMQRDGLRVWVYGTSNPVHESNRQLQAWAVDAWRYGATGLVPWQTVDKSGQALRKADQLGLFIFYQTPEGKTVIRHSARLKAYREAEQLIEYLTLV 585
+GWTE GFQVYFNNKGSLNEKTKAPWILDEP+A+WDYRALQYYGELTDRGRR A ++QIDYRIDISRPEY RG+L GR DLWVVS+ AFQ+YRRLVTDR +RDGL+VWVYGTSN VHESNRQ+QAWA+DAW+YGATG+VPWQTVDK+G+AL+KAD LGL IF + +GKTVIRHS RLKAYREAEQLI YL +V
Sbjct: 628 QGWTETGFQVYFNNKGSLNEKTKAPWILDEPTAYWDYRALQYYGELTDRGRREAKDVQIDYRIDISRPEYCRGQLAGRNDLWVVSSWAFQHYRRLVTDRAERDGLKVWVYGTSNAVHESNRQVQAWALDAWQYGATGIVPWQTVDKTGKALKKADPLGLLIFDKDEQGKTVIRHSTRLKAYREAEQLIAYLQMV 821
BLAST of mRNA_M-pyrifera_M_contig111669.2434.1 vs. uniprot
Match: A0A3C1QQ32_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3C1QQ32_9PLAN) HSP 1 Score: 332 bits (852), Expect = 3.080e-106 Identity = 152/195 (77.95%), Postives = 178/195 (91.28%), Query Frame = 1
Query: 4 RGWTEAGFQVYFNNKGSLNEKTKAPWILDEPSAFWDYRALQYYGELTDRGRRNADEIQIDYRIDISRPEYTRGELEGRGDLWVVSASAFQNYRRLVTDRMQRDGLRVWVYGTSNPVHESNRQLQAWAVDAWRYGATGLVPWQTVDKSGQALRKADQLGLFIFYQTPEGKTVIRHSARLKAYREAEQLIEYLTLVQ 588
RGW+EAGFQVYFNNKGSL++ KAPWILDEP+AFWDYRALQ+YGELTDRG R+A + IDYRIDISRPE+ RG+L GRGDLWVVS+SAF++YRRLVTDRM+RDGL+VWVYGTSNPV ESNRQ+QAWA+DAW GA+GLVPWQT+D++GQA+ +ADQLGLFIF + EG+TVIRHS RLKAYREA+QLIEYL LV+
Sbjct: 594 RGWSEAGFQVYFNNKGSLDDPAKAPWILDEPAAFWDYRALQFYGELTDRGTRSASSVAIDYRIDISRPEFCRGQLSGRGDLWVVSSSAFRDYRRLVTDRMERDGLKVWVYGTSNPVDESNRQIQAWALDAWCGGASGLVPWQTIDRTGQAMTQADQLGLFIFDRDSEGRTVIRHSLRLKAYREAQQLIEYLILVR 788
BLAST of mRNA_M-pyrifera_M_contig111669.2434.1 vs. uniprot
Match: A0A5B9QKP4_9BACT (Uncharacterized protein n=2 Tax=Roseimaritima ulvae TaxID=980254 RepID=A0A5B9QKP4_9BACT) HSP 1 Score: 333 bits (853), Expect = 1.060e-105 Identity = 153/194 (78.87%), Postives = 176/194 (90.72%), Query Frame = 1
Query: 4 RGWTEAGFQVYFNNKGSLNEKTKAPWILDEPSAFWDYRALQYYGELTDRGRRNADEIQIDYRIDISRPEYTRGELEGRGDLWVVSASAFQNYRRLVTDRMQRDGLRVWVYGTSNPVHESNRQLQAWAVDAWRYGATGLVPWQTVDKSGQALRKADQLGLFIFYQTPEGKTVIRHSARLKAYREAEQLIEYLTLV 585
R WTE GF VYFNNKG L+ KTKAPWILDEPSA+WDYRALQYYGELTDRGR+ A ++QIDYRIDISRPEY RG+L+GR DLWVV++ AFQ+YRRLV+DR RDGL+VWVYGTSN VHESNRQ+QAWA+DAW++GATG+VPWQTVDKSG+ALR+ADQLGLFIF + +G+TVIRHSARLKAYR+AEQLI YL LV
Sbjct: 671 RDWTETGFHVYFNNKGPLDSKTKAPWILDEPSAYWDYRALQYYGELTDRGRQAASDVQIDYRIDISRPEYCRGQLDGRSDLWVVASWAFQHYRRLVSDRADRDGLKVWVYGTSNEVHESNRQVQAWALDAWQHGATGIVPWQTVDKSGKALREADQLGLFIFDKDEQGQTVIRHSARLKAYRDAEQLIAYLQLV 864
BLAST of mRNA_M-pyrifera_M_contig111669.2434.1 vs. uniprot
Match: A0A354P5M6_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A354P5M6_9PLAN) HSP 1 Score: 318 bits (816), Expect = 1.100e-105 Identity = 143/196 (72.96%), Postives = 170/196 (86.73%), Query Frame = 1
Query: 1 SRGWTEAGFQVYFNNKGSLNEKTKAPWILDEPSAFWDYRALQYYGELTDRGRRNADEIQIDYRIDISRPEYTRGELEGRGDLWVVSASAFQNYRRLVTDRMQRDGLRVWVYGTSNPVHESNRQLQAWAVDAWRYGATGLVPWQTVDKSGQALRKADQLGLFIFYQTPEGKTVIRHSARLKAYREAEQLIEYLTLVQ 588
S+GWT+ GFQVYFNNKGSL+E TKAPWILDEPS++WD+RAL YYGELTDRGR E+ IDYRIDISRPE+ RGEL RGDLWVVS+ AF++YRRLV DRMQ+D + W+YGTSNP+H++NR LQAWA+DAW GATG+VPWQTVD SG+AL+ ADQLG+FIF Q +GKTV+RHS RLKAYREA+QLIEYL L++
Sbjct: 157 SKGWTDTGFQVYFNNKGSLHELTKAPWILDEPSSYWDFRALAYYGELTDRGRAATPEVMIDYRIDISRPEFCRGELSRRGDLWVVSSWAFEHYRRLVADRMQQDRFKAWIYGTSNPIHDTNRNLQAWALDAWTAGATGIVPWQTVDDSGEALKTADQLGIFIFDQDSDGKTVVRHSIRLKAYREAQQLIEYLNLLK 352
BLAST of mRNA_M-pyrifera_M_contig111669.2434.1 vs. uniprot
Match: UPI001EE84C1C (hypothetical protein n=1 Tax=Rubinisphaera sp. ICM_H10 TaxID=2909586 RepID=UPI001EE84C1C) HSP 1 Score: 331 bits (848), Expect = 3.340e-105 Identity = 152/193 (78.76%), Postives = 176/193 (91.19%), Query Frame = 1
Query: 10 WTEAGFQVYFNNKGSLNEKTKAPWILDEPSAFWDYRALQYYGELTDRGRRNADEIQIDYRIDISRPEYTRGELEGRGDLWVVSASAFQNYRRLVTDRMQRDGLRVWVYGTSNPVHESNRQLQAWAVDAWRYGATGLVPWQTVDKSGQALRKADQLGLFIFYQTPEGKTVIRHSARLKAYREAEQLIEYLTLVQ 588
W +AGFQVYFNNKG L++ TKAPWILDEPS++WDYRALQYYG+LTDRGR ADEIQIDYRIDISRPEY RG+LE + DLW+VS+SAFQNYRRLVTDRM+ +GL+ WVYGTSN V +SNR +QAWA+DAW+ GATG+VPWQTVDKSG+AL +ADQLGLFIF +TP+GKTVIRHS RLKAYREAEQLIEYL+LV+
Sbjct: 643 WHDAGFQVYFNNKGGLDQLTKAPWILDEPSSYWDYRALQYYGDLTDRGRAEADEIQIDYRIDISRPEYCRGQLERQDDLWIVSSSAFQNYRRLVTDRMRTEGLQAWVYGTSNHVDQSNRNIQAWALDAWQDGATGIVPWQTVDKSGKALNEADQLGLFIFDRTPDGKTVIRHSLRLKAYREAEQLIEYLSLVE 835
BLAST of mRNA_M-pyrifera_M_contig111669.2434.1 vs. uniprot
Match: M5S0B5_9BACT (Putative secreted protein n=1 Tax=Rhodopirellula maiorica SM1 TaxID=1265738 RepID=M5S0B5_9BACT) HSP 1 Score: 327 bits (837), Expect = 1.480e-103 Identity = 146/196 (74.49%), Postives = 177/196 (90.31%), Query Frame = 1
Query: 1 SRGWTEAGFQVYFNNKGSLNEKTKAPWILDEPSAFWDYRALQYYGELTDRGRRNADEIQIDYRIDISRPEYTRGELEGRGDLWVVSASAFQNYRRLVTDRMQRDGLRVWVYGTSNPVHESNRQLQAWAVDAWRYGATGLVPWQTVDKSGQALRKADQLGLFIFYQTPEGKTVIRHSARLKAYREAEQLIEYLTLVQ 588
+ GW + GFQVYFNNKGSL+EKTKAPWILDEP+++WDYRAL++YGELTDRGR A ++QIDYRIDISRPEY RG+L GR DLWVVS++AFQNYRRLVTDR+ RDGL+ WVYGT+N VHESNR +QAWA+DAW+YGATG+VPWQTV+K+G AL++ADQLG+FIF + P G+TV+RHS RLKAYR+A+QLIEYL L+Q
Sbjct: 630 ANGWKQTGFQVYFNNKGSLDEKTKAPWILDEPTSYWDYRALRFYGELTDRGRDVAADVQIDYRIDISRPEYCRGQLGGRDDLWVVSSAAFQNYRRLVTDRIDRDGLKAWVYGTTNHVHESNRNVQAWALDAWQYGATGIVPWQTVNKNGSALKEADQLGVFIFDKDPAGQTVVRHSMRLKAYRDAQQLIEYLNLLQ 825
BLAST of mRNA_M-pyrifera_M_contig111669.2434.1 vs. uniprot
Match: A0A517W3Z2_9PLAN (Uncharacterized protein n=1 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517W3Z2_9PLAN) HSP 1 Score: 323 bits (828), Expect = 2.380e-102 Identity = 151/196 (77.04%), Postives = 175/196 (89.29%), Query Frame = 1
Query: 1 SRGWTEAGFQVYFNNKGSLNEKTKAPWILDEPSAFWDYRALQYYGELTDRGRRNADEIQIDYRIDISRPEYTRGELEGRGDLWVVSASAFQNYRRLVTDRMQRDGLRVWVYGTSNPVHESNRQLQAWAVDAWRYGATGLVPWQTVDKSGQALRKADQLGLFIFYQTPEGKTVIRHSARLKAYREAEQLIEYLTLVQ 588
S+GW + GFQVYFNNKGSLNEKTKAPWILDEP+++WDYRALQ+YGELTDRGR A E+QI+YRIDISRPEY RG+L+ R D WVVS SAFQNYRRLVTDRMQRDGL+VWVYGTSN V+E+NR +QAWA+DAW+ GATG+VPWQTV+KSG AL+KADQLGLFIF + +TVIRHS RLKAYR+A+QLIEYL L+Q
Sbjct: 631 SKGWKQTGFQVYFNNKGSLNEKTKAPWILDEPASYWDYRALQFYGELTDRGRI-APEVQINYRIDISRPEYCRGQLDRRDDFWVVSTSAFQNYRRLVTDRMQRDGLKVWVYGTSNHVNETNRNVQAWALDAWQDGATGIVPWQTVNKSGSALKKADQLGLFIFDKNAANETVIRHSMRLKAYRDAQQLIEYLNLLQ 825 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig111669.2434.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig111669.2434.1 >prot_M-pyrifera_M_contig111669.2434.1 ID=prot_M-pyrifera_M_contig111669.2434.1|Name=mRNA_M-pyrifera_M_contig111669.2434.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=196bp SRGWTEAGFQVYFNNKGSLNEKTKAPWILDEPSAFWDYRALQYYGELTDRback to top mRNA from alignment at M-pyrifera_M_contig111669:1..588- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig111669.2434.1 ID=mRNA_M-pyrifera_M_contig111669.2434.1|Name=mRNA_M-pyrifera_M_contig111669.2434.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=588bp|location=Sequence derived from alignment at M-pyrifera_M_contig111669:1..588- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig111669:1..588- >mRNA_M-pyrifera_M_contig111669.2434.1 ID=mRNA_M-pyrifera_M_contig111669.2434.1|Name=mRNA_M-pyrifera_M_contig111669.2434.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1176bp|location=Sequence derived from alignment at M-pyrifera_M_contig111669:1..588- (Macrocystis pyrifera P11B4 male)back to top |