mRNA_M-pyrifera_M_contig111664.2432.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig111664.2432.1 vs. uniprot
Match: A0A6I6AAH6_9PLAN (PQQ-binding-like beta-propeller repeat protein n=8 Tax=Gimesia TaxID=1649453 RepID=A0A6I6AAH6_9PLAN) HSP 1 Score: 396 bits (1017), Expect = 1.290e-125 Identity = 193/196 (98.47%), Postives = 195/196 (99.49%), Query Frame = 1
Query: 1 YVFPNGKKVALFQEGQNPVAWLSQLVGTLDLKGAREQSDWTLYRGNAERIASAEFAVPSSKPEWQFSTIRDPFLQNNPNLPPLEAILQKLGDFRRKHLSGVLPAASPIVAGDTVVVRTHNNLKGLDLRSGKLKWETTVSDALFREMLKDPQNSDEEFLGTPQTPLQKYLTQRAWQDYTVGHLSSDGKLVFSVENVG 588
YVFPNGKKVALF+EGQNPVAWLSQLVGTL+LKGAREQSDWTLYRGNAERIASAEFAVPSSKPEWQFSTIRDPFLQ NPNLPPLEAILQKLGDFRRKHLSGVLPAASPIVAGDTVVVRTHNNLKGLDLRSGKLKWETTVSDALFREMLKDPQNSDEEFLGTPQTPLQKYLTQRAWQDYTVGHLSSDGKLVFSVENVG
Sbjct: 236 YVFPNGKKVALFKEGQNPVAWLSQLVGTLNLKGAREQSDWTLYRGNAERIASAEFAVPSSKPEWQFSTIRDPFLQKNPNLPPLEAILQKLGDFRRKHLSGVLPAASPIVAGDTVVVRTHNNLKGLDLRSGKLKWETTVSDALFREMLKDPQNSDEEFLGTPQTPLQKYLTQRAWQDYTVGHLSSDGKLVFSVENVG 431
BLAST of mRNA_M-pyrifera_M_contig111664.2432.1 vs. uniprot
Match: A0A517Q0V9_9PLAN (Outer membrane biogenesis protein BamB n=4 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A517Q0V9_9PLAN) HSP 1 Score: 369 bits (948), Expect = 7.240e-116 Identity = 178/196 (90.82%), Postives = 186/196 (94.90%), Query Frame = 1
Query: 1 YVFPNGKKVALFQEGQNPVAWLSQLVGTLDLKGAREQSDWTLYRGNAERIASAEFAVPSSKPEWQFSTIRDPFLQNNPNLPPLEAILQKLGDFRRKHLSGVLPAASPIVAGDTVVVRTHNNLKGLDLRSGKLKWETTVSDALFREMLKDPQNSDEEFLGTPQTPLQKYLTQRAWQDYTVGHLSSDGKLVFSVENVG 588
YVFPNGKKV LFQEGQNPV WLSQLVGT DL+GAREQSDW LYRGNA+R ASAEFAVPSSKP WQFSTIRDPF+Q NP PPLEAILQKLG++RRKHLSGVLPAASPIVAG+TVVVRTH NLKGLDL++GKLKWETTVSDALFREMLKDPQNSDEEFLGTPQTPLQKYLTQRAWQDYTVGHLSSDGKLVFSVENVG
Sbjct: 234 YVFPNGKKVTLFQEGQNPVEWLSQLVGTPDLQGAREQSDWNLYRGNADRTASAEFAVPSSKPVWQFSTIRDPFVQGNPGAPPLEAILQKLGEYRRKHLSGVLPAASPIVAGETVVVRTHRNLKGLDLQTGKLKWETTVSDALFREMLKDPQNSDEEFLGTPQTPLQKYLTQRAWQDYTVGHLSSDGKLVFSVENVG 429
BLAST of mRNA_M-pyrifera_M_contig111664.2432.1 vs. uniprot
Match: A0A350KBY4_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A350KBY4_9PLAN) HSP 1 Score: 288 bits (736), Expect = 4.420e-90 Identity = 134/196 (68.37%), Postives = 159/196 (81.12%), Query Frame = 1
Query: 1 YVFPNGKKVALFQEGQNPVAWLSQLVGTLDLKGAREQSDWTLYRGNAERIASAEFAVPSSKPEWQFSTIRDPFLQNNPNLPPLEAILQKLGDFRRKHLSGVLPAASPIVAGDTVVVRTHNNLKGLDLRSGKLKWETTVSDALFREMLKDPQNSDEEFLGTPQTPLQKYLTQRAWQDYTVGHLSSDGKLVFSVENVG 588
Y FPNG KV LF +NPV WLSQL G LDL+ AREQ +WT+YRG+ R ASAE AVPS+KP WQ+STI+DPFLQ + PP+E +LQKLG+ RRKH+ GVLPAASP+V D V+ RTH NLK + L++GKL WETT+SD L++E+LKDPQN DEEF GTPQTPL+KYLTQR WQDYT GHLS+DGKLVF VEN+G
Sbjct: 106 YQFPNGTKVPLFSADENPVEWLSQLTGRLDLRAAREQDNWTMYRGSPARTASAELAVPSAKPLWQYSTIQDPFLQLLKDPPPVEEMLQKLGEHRRKHVPGVLPAASPLVIHDQVIFRTHRNLKAVSLKTGKLSWETTLSDELYQELLKDPQNMDEEFSGTPQTPLEKYLTQRGWQDYTAGHLSTDGKLVFCVENLG 301
BLAST of mRNA_M-pyrifera_M_contig111664.2432.1 vs. uniprot
Match: A0A517VEA7_9PLAN (Outer membrane biogenesis protein BamB n=1 Tax=Gimesia algae TaxID=2527971 RepID=A0A517VEA7_9PLAN) HSP 1 Score: 290 bits (743), Expect = 1.610e-87 Identity = 136/196 (69.39%), Postives = 162/196 (82.65%), Query Frame = 1
Query: 1 YVFPNGKKVALFQEGQNPVAWLSQLVGTLDLKGAREQSDWTLYRGNAERIASAEFAVPSSKPEWQFSTIRDPFLQNNPNLPPLEAILQKLGDFRRKHLSGVLPAASPIVAGDTVVVRTHNNLKGLDLRSGKLKWETTVSDALFREMLKDPQNSDEEFLGTPQTPLQKYLTQRAWQDYTVGHLSSDGKLVFSVENVG 588
Y FPNG KV+LF +NPV WLS+L G LDL+ AREQ DWT+YRG+ R ASAEFAVPS+KP WQFSTI+DPFLQ + PP+ +LQKLG RRKH++GVLPAASP+V D V+ RTH NLK + L++GKL WETT+SD L++E+LKDPQN+DEEFLGTPQTPL+KYL QRAWQDYT GHLS+DGKLV+ VENVG
Sbjct: 217 YQFPNGTKVSLFTADENPVEWLSRLTGRLDLRVAREQGDWTMYRGSPARTASAEFAVPSAKPLWQFSTIQDPFLQLLKDPPPVAEMLQKLGAHRRKHVAGVLPAASPLVIRDQVIFRTHRNLKAVSLKTGKLSWETTLSDKLYQELLKDPQNTDEEFLGTPQTPLEKYLAQRAWQDYTAGHLSTDGKLVYCVENVG 412
BLAST of mRNA_M-pyrifera_M_contig111664.2432.1 vs. uniprot
Match: A6CFB3_9PLAN (Uncharacterized protein n=7 Tax=Gimesia TaxID=1649453 RepID=A6CFB3_9PLAN) HSP 1 Score: 288 bits (736), Expect = 1.460e-86 Identity = 133/196 (67.86%), Postives = 160/196 (81.63%), Query Frame = 1
Query: 1 YVFPNGKKVALFQEGQNPVAWLSQLVGTLDLKGAREQSDWTLYRGNAERIASAEFAVPSSKPEWQFSTIRDPFLQNNPNLPPLEAILQKLGDFRRKHLSGVLPAASPIVAGDTVVVRTHNNLKGLDLRSGKLKWETTVSDALFREMLKDPQNSDEEFLGTPQTPLQKYLTQRAWQDYTVGHLSSDGKLVFSVENVG 588
Y FPNG KV LF +NPV WLSQL G LDL+ REQ +W++YRG+ R ASAE AVPS+KP WQ+STI+DPFLQ + PP+E +LQKLG+ RRKH++GVLPAASP+V D V+ RTH NLK + L++GKL WETT+SDAL++E+LKDPQN DEEF GTPQTPL+KYLTQR WQDYT GHLS+DGKLVF VEN+G
Sbjct: 222 YQFPNGTKVPLFSADENPVEWLSQLTGRLDLRAVREQDNWSMYRGSPARTASAELAVPSAKPLWQYSTIQDPFLQLLKDPPPVEEMLQKLGEHRRKHIAGVLPAASPLVIHDQVIFRTHRNLKAVSLKTGKLSWETTLSDALYQELLKDPQNMDEEFSGTPQTPLEKYLTQRGWQDYTAGHLSTDGKLVFCVENLG 417
BLAST of mRNA_M-pyrifera_M_contig111664.2432.1 vs. uniprot
Match: A0A2E2C0C4_9PLAN (Uncharacterized protein n=6 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2C0C4_9PLAN) HSP 1 Score: 285 bits (729), Expect = 1.330e-85 Identity = 133/196 (67.86%), Postives = 162/196 (82.65%), Query Frame = 1
Query: 1 YVFPNGKKVALFQEGQNPVAWLSQLVGTLDLKGAREQSDWTLYRGNAERIASAEFAVPSSKPEWQFSTIRDPFLQNNPNLPPLEAILQKLGDFRRKHLSGVLPAASPIVAGDTVVVRTHNNLKGLDLRSGKLKWETTVSDALFREMLKDPQNSDEEFLGTPQTPLQKYLTQRAWQDYTVGHLSSDGKLVFSVENVG 588
Y FPNG +V LF +NPV WLS+L G LDL+ AREQ +WT+YRG+ R ASAEF VPS+KP W+FSTI++PFLQ + PP+E +LQKLG+ RRK+ +GVLPAASP+V D V+ RTH NLK + L++G+L WETTVSDAL++E+LKDPQN DEEFLGTPQTPL+KYLTQRAWQDYT GHLS+DGKLV+ VENVG
Sbjct: 239 YEFPNGTRVPLFTADENPVEWLSRLTGRLDLQVAREQDNWTMYRGSPARTASAEFVVPSAKPLWEFSTIQEPFLQLLKDPPPVEDMLQKLGEHRRKNQAGVLPAASPVVIRDQVIFRTHRNLKSVSLKTGQLNWETTVSDALYQELLKDPQNEDEEFLGTPQTPLEKYLTQRAWQDYTAGHLSTDGKLVYCVENVG 434
BLAST of mRNA_M-pyrifera_M_contig111664.2432.1 vs. uniprot
Match: A0A518I6B4_9PLAN (Outer membrane biogenesis protein BamB n=2 Tax=Gimesia fumaroli TaxID=2527976 RepID=A0A518I6B4_9PLAN) HSP 1 Score: 270 bits (690), Expect = 2.420e-80 Identity = 123/194 (63.40%), Postives = 153/194 (78.87%), Query Frame = 1
Query: 7 FPNGKKVALFQEGQNPVAWLSQLVGTLDLKGAREQSDWTLYRGNAERIASAEFAVPSSKPEWQFSTIRDPFLQNNPNLPPLEAILQKLGDFRRKHLSGVLPAASPIVAGDTVVVRTHNNLKGLDLRSGKLKWETTVSDALFREMLKDPQNSDEEFLGTPQTPLQKYLTQRAWQDYTVGHLSSDGKLVFSVENVG 588
FPNG KV L NPV WL+ +G DL+ A+EQ +WT+YRG+ R+ASA FAVPS+KP WQ+STI+DP L + +P L+ +LQKLGD+RRKH+ GVLPAASP++ D V+ RTH NLK + L +GKL W+TT+SDAL++E+L DPQN DEE LG PQTPL+KYL QRAWQDYT GHLSSDGKL++SVENVG
Sbjct: 193 FPNGTKVTLNFANDNPVDWLAGFLGIPDLRAAQEQKNWTMYRGSPSRLASALFAVPSAKPVWQYSTIKDPVLSDQKEVPQLDVMLQKLGDYRRKHIEGVLPAASPLIVQDQVIFRTHRNLKAVSLATGKLTWQTTMSDALYQELLNDPQNMDEESLGMPQTPLEKYLAQRAWQDYTAGHLSSDGKLIYSVENVG 386
BLAST of mRNA_M-pyrifera_M_contig111664.2432.1 vs. uniprot
Match: A0A517R9N4_9PLAN (Outer membrane biogenesis protein BamB n=1 Tax=Gimesia alba TaxID=2527973 RepID=A0A517R9N4_9PLAN) HSP 1 Score: 265 bits (678), Expect = 1.060e-78 Identity = 121/196 (61.73%), Postives = 153/196 (78.06%), Query Frame = 1
Query: 1 YVFPNGKKVALFQEGQNPVAWLSQLVGTLDLKGAREQSDWTLYRGNAERIASAEFAVPSSKPEWQFSTIRDPFLQNNPNLPPLEAILQKLGDFRRKHLSGVLPAASPIVAGDTVVVRTHNNLKGLDLRSGKLKWETTVSDALFREMLKDPQNSDEEFLGTPQTPLQKYLTQRAWQDYTVGHLSSDGKLVFSVENVG 588
+ PNG K+ L NPV W + L+GT DL+ A EQ DWT+YRG+ R+ASA FAVPS+KP W+FSTI+D L + + PPLE +LQKLG++RRKH+ GVLPAASP++ D V+ RTH NLK + L G+L W+TT+ DAL++++L+DPQN DEE LG P+TPL+KYLTQRAWQDYT GHLS+DGKLVFSVENVG
Sbjct: 234 FELPNGTKITLTFANDNPVDWFAALLGTPDLRAAEEQKDWTMYRGSPSRLASALFAVPSAKPVWRFSTIQDSVLSSQKDAPPLENMLQKLGEYRRKHVPGVLPAASPLIIQDQVIFRTHRNLKAVSLSKGELTWQTTLPDALYQKLLQDPQNEDEESLGMPETPLEKYLTQRAWQDYTAGHLSTDGKLVFSVENVG 429
BLAST of mRNA_M-pyrifera_M_contig111664.2432.1 vs. uniprot
Match: A0A517WTF6_9PLAN (Outer membrane biogenesis protein BamB n=4 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WTF6_9PLAN) HSP 1 Score: 262 bits (670), Expect = 1.260e-77 Identity = 124/196 (63.27%), Postives = 147/196 (75.00%), Query Frame = 1
Query: 1 YVFPNGKKVALFQEGQNPVAWLSQLVGTLDLKGAREQSDWTLYRGNAERIASAEFAVPSSKPEWQFSTIRDPFLQNNPNLPPLEAILQKLGDFRRKHLSGVLPAASPIVAGDTVVVRTHNNLKGLDLRSGKLKWETTVSDALFREMLKDPQNSDEEFLGTPQTPLQKYLTQRAWQDYTVGHLSSDGKLVFSVENVG 588
Y FPNGK+V LF +NPV WLS+LVG DLK A+EQ W +YRG R+ASA FAVPS+KP W+FSTI + P LE ++QKL RRKH GVLPAASPI+ D V+ RTH NLK + L +G+L WETT++DAL+ E+LKD +NSD+EF G PQTPL+KYL QRAWQDYT GHLSSDGKLVFSVENVG
Sbjct: 233 YQFPNGKRVPLFTADENPVEWLSRLVGNPDLKAAQEQKSWAMYRGGPSRLASARFAVPSTKPFWRFSTINHSSRNDLQAAPLLEELVQKLRKHRRKHFEGVLPAASPIIVNDKVIFRTHRNLKAVSLSTGELSWETTLTDALYHELLKDAENSDQEFSGAPQTPLEKYLAQRAWQDYTAGHLSSDGKLVFSVENVG 428
BLAST of mRNA_M-pyrifera_M_contig111664.2432.1 vs. uniprot
Match: A0A7C4IQ66_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C4IQ66_9BACT) HSP 1 Score: 103 bits (257), Expect = 3.800e-22 Identity = 67/191 (35.08%), Postives = 93/191 (48.69%), Query Frame = 1
Query: 16 GKKVALFQEGQNPVAWLSQLVGTLDLKGAREQSDWTLYRGNAERIASAEFAVPSSKPEWQFSTIRDPFLQNNPNLPPLEAILQKLGDFRRKHLSGVLPAASPIVAGDTVVVRTHNNLKGLDLRSGKLKWETTVSDALFREMLKDPQNSDEEFLGTPQTPLQKYLTQRAWQDYTVGHLSSDGKLVFSVENVG 588
G++VA F E V WL + G L L ++ W + RGN R A+ P W+ + D P LE ++++ + +LP P+V D V++RT NL +D SGK WE V DA + +L +NS E L PQ + L QR D T G LSSDGKLVFS+E++G
Sbjct: 230 GREVAFFDEKSKAVDWLLGISGQLGLAEDQQTDRWVMRRGNPSRTAAVSGGAPLMNMLWRVAIADD---------PALEDTIRQVRQVFTEQDQSLLPGFHPLVVNDIVLMRTARNLLAVDFESGKRLWEAPVDDA-WENLLG--RNSPEALLKQPQMLIG--LGQRVGDDATFGSLSSDGKLVFSIEDLG 406 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig111664.2432.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig111664.2432.1 >prot_M-pyrifera_M_contig111664.2432.1 ID=prot_M-pyrifera_M_contig111664.2432.1|Name=mRNA_M-pyrifera_M_contig111664.2432.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=196bp YVFPNGKKVALFQEGQNPVAWLSQLVGTLDLKGAREQSDWTLYRGNAERIback to top mRNA from alignment at M-pyrifera_M_contig111664:2..589+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig111664.2432.1 ID=mRNA_M-pyrifera_M_contig111664.2432.1|Name=mRNA_M-pyrifera_M_contig111664.2432.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=588bp|location=Sequence derived from alignment at M-pyrifera_M_contig111664:2..589+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig111664:2..589+ >mRNA_M-pyrifera_M_contig111664.2432.1 ID=mRNA_M-pyrifera_M_contig111664.2432.1|Name=mRNA_M-pyrifera_M_contig111664.2432.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1176bp|location=Sequence derived from alignment at M-pyrifera_M_contig111664:2..589+ (Macrocystis pyrifera P11B4 male)back to top |