mRNA_M-pyrifera_M_contig111661.2431.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig111661.2431.1
Unique NamemRNA_M-pyrifera_M_contig111661.2431.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig111661.2431.1 vs. uniprot
Match: UPI000B903ECF (cytochrome P450 2J3 n=1 Tax=Folsomia candida TaxID=158441 RepID=UPI000B903ECF)

HSP 1 Score: 62.8 bits (151), Expect = 1.450e-9
Identity = 25/55 (45.45%), Postives = 38/55 (69.09%), Query Frame = 1
Query:   82 PGPPRLPIIGNIHYLLSEPWKQFFAFYKQYGTIFKLFIWGNPFVVVADPGMVRQL 246
            PGP RLP++GN+H L SEP K F    K+YG +F ++   NP V++ DP ++R++
Sbjct:   39 PGPRRLPLLGNLHQLGSEPHKAFMKMQKEYGDMFSIYFGNNPAVIINDPKLLREM 93          
BLAST of mRNA_M-pyrifera_M_contig111661.2431.1 vs. uniprot
Match: A0A226DYY8_FOLCA (Cytochrome P450 2J1 n=1 Tax=Folsomia candida TaxID=158441 RepID=A0A226DYY8_FOLCA)

HSP 1 Score: 62.8 bits (151), Expect = 1.490e-9
Identity = 25/55 (45.45%), Postives = 38/55 (69.09%), Query Frame = 1
Query:   82 PGPPRLPIIGNIHYLLSEPWKQFFAFYKQYGTIFKLFIWGNPFVVVADPGMVRQL 246
            PGP RLP++GN+H L SEP K F    K+YG +F ++   NP V++ DP ++R++
Sbjct:   39 PGPRRLPLLGNLHQLGSEPHKAFMKMQKEYGDMFSIYFGNNPAVIINDPKLLREM 93          
BLAST of mRNA_M-pyrifera_M_contig111661.2431.1 vs. uniprot
Match: L8GKG1_ACACA (Cytochrome p450 superfamily protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GKG1_ACACA)

HSP 1 Score: 62.0 bits (149), Expect = 2.700e-9
Identity = 26/64 (40.62%), Postives = 41/64 (64.06%), Query Frame = 1
Query:   64 SRLWQIPGPPRLPIIGNIHYLLSEPWKQFFAFYKQYGTIFKLFIWGNPFVVVADPGMVRQLMQT 255
            S L  IPGPP LP++GN+  ++ +P   F  + K YG IFK + + +P VV++DP  V+ ++ T
Sbjct:   29 SLLVNIPGPPPLPVVGNVLEMMGDPLVAFAQYRKTYGPIFKYYYFTDPVVVISDPAFVKTVLNT 92          
BLAST of mRNA_M-pyrifera_M_contig111661.2431.1 vs. uniprot
Match: A0A1D1XHV8_9ARAE (Cytochrome P450 71B34 (Fragment) n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1XHV8_9ARAE)

HSP 1 Score: 58.2 bits (139), Expect = 5.300e-8
Identity = 27/58 (46.55%), Postives = 38/58 (65.52%), Query Frame = 1
Query:   82 PGPPRLPIIGNIHYLLSEPWKQFFAFYKQYGTIFKLFIWGNPFVVVADPGMVRQLMQT 255
            PGPPRLPI+GN+H L   P +  +   KQYG I +L + G P VVV+   M R++++T
Sbjct:   41 PGPPRLPIVGNLHQLGKIPHRTLWELSKQYGPIMQLQLGGVPTVVVSSAHMAREILKT 98          
BLAST of mRNA_M-pyrifera_M_contig111661.2431.1 vs. uniprot
Match: A0A1D1Z4H9_9ARAE (Cytochrome P450 71A1 (Fragment) n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1Z4H9_9ARAE)

HSP 1 Score: 58.2 bits (139), Expect = 6.160e-8
Identity = 27/58 (46.55%), Postives = 38/58 (65.52%), Query Frame = 1
Query:   82 PGPPRLPIIGNIHYLLSEPWKQFFAFYKQYGTIFKLFIWGNPFVVVADPGMVRQLMQT 255
            PGPPRLPI+GN+H L   P +  +   KQYG I +L + G P VVV+   M R++++T
Sbjct:   41 PGPPRLPIVGNLHQLGKIPHRTLWELSKQYGPIMQLQLGGVPTVVVSSAHMAREILKT 98          
BLAST of mRNA_M-pyrifera_M_contig111661.2431.1 vs. uniprot
Match: A0A6P5GSQ1_ANACO (cytochrome P450 71A1-like n=2 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5GSQ1_ANACO)

HSP 1 Score: 57.4 bits (137), Expect = 1.150e-7
Identity = 27/70 (38.57%), Postives = 43/70 (61.43%), Query Frame = 1
Query:   46 RDEIGASRLWQIPGPPRLPIIGNIHYLLSEPWKQFFAFYKQYGTIFKLFIWGNPFVVVADPGMVRQLMQT 255
            R++I  S L   PGPP+LP+IGN+H L S PW+      +QYG +  L +   P +VV+   + R++++T
Sbjct:   28 RNKISPS-LKLPPGPPKLPLIGNLHQLGSLPWRSLSRLSQQYGPLMYLKLGSRPTIVVSSANIAREILKT 96          
BLAST of mRNA_M-pyrifera_M_contig111661.2431.1 vs. uniprot
Match: A0A6V7QZ46_ANACO (Uncharacterized protein n=1 Tax=Ananas comosus var. bracteatus TaxID=296719 RepID=A0A6V7QZ46_ANACO)

HSP 1 Score: 56.6 bits (135), Expect = 2.240e-7
Identity = 23/58 (39.66%), Postives = 37/58 (63.79%), Query Frame = 1
Query:   82 PGPPRLPIIGNIHYLLSEPWKQFFAFYKQYGTIFKLFIWGNPFVVVADPGMVRQLMQT 255
            PGPP+LP+IGN+H L S PW+      +QYG +  L +   P +VV+   + R++++T
Sbjct:  834 PGPPKLPLIGNLHQLGSLPWRSLSRLSQQYGPLMYLKLGSRPTIVVSSANIAREILKT 891          
BLAST of mRNA_M-pyrifera_M_contig111661.2431.1 vs. uniprot
Match: UPI001B38A426 (uncharacterized protein n=1 Tax=Cryphonectria parasitica EP155 TaxID=660469 RepID=UPI001B38A426)

HSP 1 Score: 55.5 bits (132), Expect = 5.510e-7
Identity = 26/59 (44.07%), Postives = 40/59 (67.80%), Query Frame = 1
Query:   82 PGPPRLPIIGN-IHYLLSEPWKQFFAFYKQYGTIFKLFIWGNPFVVVADPGMVRQLMQT 255
            PGPP LP IGN +    S+PW QF A+ ++YG IF ++I   P V+++DP +  +LM++
Sbjct:   42 PGPPPLPFIGNKLQLPKSKPWVQFQAWSQRYGPIFTIWIGRRPTVIISDPIVASELMES 100          
BLAST of mRNA_M-pyrifera_M_contig111661.2431.1 vs. uniprot
Match: A0A4Y9Z789_9AGAM (Uncharacterized protein n=1 Tax=Dentipellis fragilis TaxID=205917 RepID=A0A4Y9Z789_9AGAM)

HSP 1 Score: 55.5 bits (132), Expect = 5.760e-7
Identity = 33/80 (41.25%), Postives = 43/80 (53.75%), Query Frame = 1
Query:   22 LALLGFVIRDEIGASRLWQIPGPPRLPIIGNIH-YLLSEPWKQFFAFYKQYGTIFKLFIWGNPFVVVADPGMVRQLMQTE 258
            L LLG      IG       PGPP LPIIGNIH +  S    +F  + +QYG IF L +     VVV+D  + R L++T+
Sbjct:  486 LVLLGLFYAQSIGRRESGLPPGPPTLPIIGNIHQFPKSYAHLKFTEWARQYGGIFSLKVSSQTIVVVSDRQIARDLLETK 565          
BLAST of mRNA_M-pyrifera_M_contig111661.2431.1 vs. uniprot
Match: A0A251SK18_HELAN (Putative cytochrome P450 n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251SK18_HELAN)

HSP 1 Score: 55.1 bits (131), Expect = 6.850e-7
Identity = 23/60 (38.33%), Postives = 41/60 (68.33%), Query Frame = 1
Query:   82 PGPPRLPIIGNIHYLLSEPWKQ-FFAFYKQYGTIFKLFIWGNPFVVVADPGMVRQLMQTE 258
            PGPP+LPIIGN+H LL +P  +  +   K+YG + ++ I    F++++ P M +Q+++T+
Sbjct:   43 PGPPKLPIIGNMHQLLGKPRHEALWQLSKEYGPLMQIQIGFKQFLIISSPAMAKQILKTQ 102          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig111661.2431.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI000B903ECF1.450e-945.45cytochrome P450 2J3 n=1 Tax=Folsomia candida TaxID... [more]
A0A226DYY8_FOLCA1.490e-945.45Cytochrome P450 2J1 n=1 Tax=Folsomia candida TaxID... [more]
L8GKG1_ACACA2.700e-940.63Cytochrome p450 superfamily protein n=1 Tax=Acanth... [more]
A0A1D1XHV8_9ARAE5.300e-846.55Cytochrome P450 71B34 (Fragment) n=1 Tax=Anthurium... [more]
A0A1D1Z4H9_9ARAE6.160e-846.55Cytochrome P450 71A1 (Fragment) n=1 Tax=Anthurium ... [more]
A0A6P5GSQ1_ANACO1.150e-738.57cytochrome P450 71A1-like n=2 Tax=Ananas comosus T... [more]
A0A6V7QZ46_ANACO2.240e-739.66Uncharacterized protein n=1 Tax=Ananas comosus var... [more]
UPI001B38A4265.510e-744.07uncharacterized protein n=1 Tax=Cryphonectria para... [more]
A0A4Y9Z789_9AGAM5.760e-741.25Uncharacterized protein n=1 Tax=Dentipellis fragil... [more]
A0A251SK18_HELAN6.850e-738.33Putative cytochrome P450 n=1 Tax=Helianthus annuus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig111661contigM-pyrifera_M_contig111661:1..258 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorysignal peptide
Exons1
Model size258
Cds size258
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815629.4456112-CDS-M-pyrifera_M_contig111661:0..2581622815629.4456112-CDS-M-pyrifera_M_contig111661:0..258Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig111661 1..258 -
1692277495.324271-CDS-M-pyrifera_M_contig111661:0..2581692277495.324271-CDS-M-pyrifera_M_contig111661:0..258Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig111661 1..258 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig111661.2431.1prot_M-pyrifera_M_contig111661.2431.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig111661 1..258 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig111661.2431.1

>prot_M-pyrifera_M_contig111661.2431.1 ID=prot_M-pyrifera_M_contig111661.2431.1|Name=mRNA_M-pyrifera_M_contig111661.2431.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=86bp
MVLCAIVLALLGFVIRDEIGASRLWQIPGPPRLPIIGNIHYLLSEPWKQF
FAFYKQYGTIFKLFIWGNPFVVVADPGMVRQLMQTE
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mRNA from alignment at M-pyrifera_M_contig111661:1..258-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig111661.2431.1 ID=mRNA_M-pyrifera_M_contig111661.2431.1|Name=mRNA_M-pyrifera_M_contig111661.2431.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=258bp|location=Sequence derived from alignment at M-pyrifera_M_contig111661:1..258- (Macrocystis pyrifera P11B4 male)
ATGGTGCTATGCGCCATTGTGTTGGCTCTATTGGGTTTTGTGATACGAGA TGAAATTGGAGCTTCCCGTTTGTGGCAAATTCCTGGGCCTCCTCGACTCC CAATCATTGGGAACATTCACTACCTCTTATCGGAACCATGGAAGCAGTTC TTTGCCTTCTACAAGCAGTATGGGACGATTTTCAAGCTTTTCATTTGGGG GAATCCATTTGTAGTCGTTGCTGATCCTGGAATGGTGCGGCAACTGATGC AAACGGAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig111661:1..258-

>mRNA_M-pyrifera_M_contig111661.2431.1 ID=mRNA_M-pyrifera_M_contig111661.2431.1|Name=mRNA_M-pyrifera_M_contig111661.2431.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=516bp|location=Sequence derived from alignment at M-pyrifera_M_contig111661:1..258- (Macrocystis pyrifera P11B4 male)
ATGGTGCTATGCGCCATTGTGTTGGCTCTATTGGGTTTTGTGATACGAGA
TGAAATTGGAGCTTCCCGTTTGTGGCAAATTCCTGGGCCTCCTCGACTCC
CAATCATTGGGAACATTCACTACCTCTTATCGGAACCATGGAAGCAGTTC
TTTGCCTTCTACAAGCAGTATGGGACGATTTTCAAGCTTTTCATTTGGGG
GAATCCATTTGTAGTCGTTGCTGATCCTGGAATGGTGCGGCAACTGATGC
AAACGGAAATGGTGCTATGCGCCATTGTGTTGGCTCTATTGGGTTTTGTG
ATACGAGATGAAATTGGAGCTTCCCGTTTGTGGCAAATTCCTGGGCCTCC
TCGACTCCCAATCATTGGGAACATTCACTACCTCTTATCGGAACCATGGA
AGCAGTTCTTTGCCTTCTACAAGCAGTATGGGACGATTTTCAAGCTTTTC
ATTTGGGGGAATCCATTTGTAGTCGTTGCTGATCCTGGAATGGTGCGGCA
ACTGATGCAAACGGAA
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