mRNA_M-pyrifera_M_contig11166.2430.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig11166.2430.1 vs. uniprot
Match: D8LK40_ECTSI (DUF4205 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK40_ECTSI) HSP 1 Score: 223 bits (569), Expect = 1.760e-62 Identity = 176/417 (42.21%), Postives = 218/417 (52.28%), Query Frame = 1
Query: 1 VKALRQALKDVPSSGVDKNERFRRVSALVGGRHSKKDCYDKYKKELKAETKIKRSTKNGXXXXXXXXXXXXXXAEG-------------SAEPSASWHRPLEATKNVDPPDRTLRATNSSNNITGKXXXXXXXXXXXXXXXXXXXXXXXXXLRQRSAFESALTPVGSAPSPGEIRATF--LVG--RGSSAELMDDGGGLDGAFGDDRVADGAYDDAKDAMEVTEVEDIDVDDFCLDDELL-QPAT-------DHHDNAESKEGGTSR-RPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEELSGRQGVTEMQANGVRQLVFGDRSKSFNDAWREQGFYFSSVNGLRYGLIQAEGGPCGVLAAVQAFILENMIFGDNVDNGEGLDWRNPKKSHRERSLASALGNVIWRAGDGHT 1173
VKALRQALKDVP++ +DKNERFRRVSALVGG HSKK CY+KYK ELKAE K+K++T A S PS++ + +E T V ++ ++ S +G+ RS +AL+ V S ++ T G RG E + D +A G K E+ EVE++DV+DFCLD+EL+ +P + EGG P XXXXXXXXXX L GR VTE+QANGVR+LVFG+ SK FNDAWREQGF+F + LRYGL+QAEGGPCGVLAAVQAF+LE++IFGD G DWRNPKKS RERSL SAL +IW AGDG+T
Sbjct: 24 VKALRQALKDVPAA-LDKNERFRRVSALVGGSHSKKACYEKYK-ELKAEAKLKQTTPRTSVSGASPGDSRDRRAANKKKACAGNDGEIISVSPSSAGQQQVEVTS-VSTAAGSVTSSTVSGLFSGRSSATTLSSWSSNSADLCARQEQQRQEHIRSMKSNALSSVSSGLPESDMLETQGNFEGDRRGYYPEKSNSRASNDSIDRPTSLAGGGPQTTKHEEELMEVEEVDVEDFCLDEELVVEPRRRVXXXXXXXXPHTRRAEGGRQDWNPAAGNSGAGFHRTGQGDSQATTPSXXXXXXXXXXGGLPGRTAVTEVQANGVRELVFGNPSKRFNDAWREQGFFFCGEDFLRYGLVQAEGGPCGVLAAVQAFVLEDLIFGDCA----GCDWRNPKKSQRERSLTSALSTIIWSAGDGNT 433
BLAST of mRNA_M-pyrifera_M_contig11166.2430.1 vs. uniprot
Match: A0A6H5JIJ1_9PHAE (DUF4205 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIJ1_9PHAE) HSP 1 Score: 212 bits (539), Expect = 2.530e-58 Identity = 160/408 (39.22%), Postives = 198/408 (48.53%), Query Frame = 1
Query: 1 VKALRQALKDVPSSGVDKNERFRRVSALVGGRHSKKDCYDKYKKELKAETKIKRSTKNGXXXXXXXXXXXXXXAEG---SAEPSASWHRPLEATKNVDPPDRTLRATNSSNNITGKXXXXXXXXXXXXXXXXXXXXXXXXXLRQRSAFESALTPVGSAPSPG---EIRATFLVGR-GSSAELMDDGGGLDGAFGDDRVADGAYDDAKDAMEVTEVEDIDVDDFCLDDELL-QPATDHHD--------NAESKEGGTSR-RPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEELSGRQGVTEMQANGVRQLVFGDRSKSFNDAWREQGFYFSSVNGLRYGLIQAEGGPCGVLAAVQAFILENMIFGDNVDNGEGLDWRNPKKSHRERSLASALGNVIWRAGDGHT 1173
VKALR+ALKDVP++ + KNERFRRVSALVGG H+KK CY+KYK ELKAE K+K + +G S PS + + E +T S +G+ S +AL+ V S P +I F R G + D +A G AK E+ EV+++DV+DFCLD+EL+ +P + EGG P EL GR VTE+QANGVR+LVFG+ SK FNDAWREQGF+F LRYGL+Q +GGPCGVLAAVQAF+LE+MIFGD G DWRNPKKS RE SL SAL +IWRAGDG+T
Sbjct: 5 VKALRRALKDVPAT-LGKNERFRRVSALVGGTHNKKACYEKYK-ELKAEAKLKAPPGDSRDRRAANKKNSSTGNDGEMISVSPSNAEQQQDEVISGSTAAGSVTSST-VSGLFSGRSSATTLSSWSSDSADRCARQEQQRQEHVSSMKSNALSSVSSGPPESGKLDIHGNFEGDRRGYYPGKSNSRASTDSIDRPTSLAGGGPQTAKHEEELMEVDEVDVEDFCLDEELVVEPRRRVRXXXXXXXXLHTRRAEGGCQDWNPAPGNSGAGFRHTGQGDNQATIPSSAGGDGGRGSGELPGRTAVTEVQANGVRELVFGNPSKRFNDAWREQGFFFCGEEFLRYGLVQVKGGPCGVLAAVQAFLLEDMIFGDCA----GCDWRNPKKSQREHSLTSALSTIIWRAGDGNT 405
BLAST of mRNA_M-pyrifera_M_contig11166.2430.1 vs. uniprot
Match: UPI00109BD998 (probable ubiquitin carboxyl-terminal hydrolase MINDY-4 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109BD998) HSP 1 Score: 102 bits (255), Expect = 4.980e-20 Identity = 45/102 (44.12%), Postives = 66/102 (64.71%), Query Frame = 1
Query: 868 QANGVRQLVFGDRSKSFNDAWREQGFYFSSVNGLRYGLIQAEGGPCGVLAAVQAFILENMIFGDNVDNGEGLDWRNPKKSHRERSLASALGNVIWRAGDGHT 1173
QA ++ L+FG + SFN WR+Q F F + GL YG++Q +GGPCGVLAAVQAF+L++++FGD + P R ++LA+A+ ++WRAG T
Sbjct: 348 QAMALKNLIFGSANSSFNQEWRQQSFNFCDLYGLEYGIVQHKGGPCGVLAAVQAFVLKSLLFGDQRKR-DXRQCLQPSSRERTKALATAIAEILWRAGQNQT 448
BLAST of mRNA_M-pyrifera_M_contig11166.2430.1 vs. uniprot
Match: G4YWI6_PHYSP (Myb-like domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YWI6_PHYSP) HSP 1 Score: 101 bits (252), Expect = 9.390e-20 Identity = 47/110 (42.73%), Postives = 68/110 (61.82%), Query Frame = 1
Query: 859 TEMQANGVRQLVFGDRSKSFNDAWREQGFYFSSVNGLRYGLIQAEGGPCGVLAAVQAFILENMIFGDNVDNGEGLDWRNPKKSHRERSLASALGNVIWRA-----GDGHT 1173
T + V+QL+FG K+F+ W EQGF FS+V L+YGL+Q +GGPCG+LA VQ ++L ++ +DW+NP H+ER+L AL +++W A GD HT
Sbjct: 207 TASDVSAVQQLLFGANKKAFSSHWDEQGFVFSTVRDLQYGLVQHQGGPCGILAVVQGYVLRFLL------QHAPVDWKNPGVPHQERALVQALAHILWEAAQTSRGDNHT 310
BLAST of mRNA_M-pyrifera_M_contig11166.2430.1 vs. uniprot
Match: A0A7S2R941_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2R941_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 4.570e-19 Identity = 45/99 (45.45%), Postives = 68/99 (68.69%), Query Frame = 1
Query: 868 QANGVRQLVFGDRSKS-FNDAWREQGFYFSSVNGLRYGLIQAEGGPCGVLAAVQAFILENMIFGDNVDNGEGLDWRNPKKSHRERSLASALGNVIWRAG 1161
QA V++LVF DR + F+ +W+ QGF+F S+ L+YGL+Q +GGPCGV+AAVQAF+L+ ++FG + +W NP + + +L AL +IW+AG
Sbjct: 150 QAKLVKKLVFADRKPNVFDVSWKNQGFFFQSIQDLKYGLVQVKGGPCGVIAAVQAFVLKALLFGSK----KAQNWENPTRREQVDALIDALCTIIWQAG 244
BLAST of mRNA_M-pyrifera_M_contig11166.2430.1 vs. uniprot
Match: A0A6A3Z0P7_9STRA (Myb-like domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3Z0P7_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 5.010e-19 Identity = 47/110 (42.73%), Postives = 68/110 (61.82%), Query Frame = 1
Query: 859 TEMQANGVRQLVFGDRSKSFNDAWREQGFYFSSVNGLRYGLIQAEGGPCGVLAAVQAFILENMIFGDNVDNGEGLDWRNPKKSHRERSLASALGNVIWRA-----GDGHT 1173
T + V+QL+FG K+F W EQGF FS+V L+YGL+Q +GGPCG+LA VQ ++L ++ +DW+NP ++ER+L AL ++IW+A GD HT
Sbjct: 294 TASDVSAVQQLLFGANKKAFGSHWEEQGFVFSTVCDLQYGLVQHQGGPCGILAVVQGYVLRFLL------QHAPVDWKNPGVPYQERALVQALAHIIWQAAQASRGDNHT 397
BLAST of mRNA_M-pyrifera_M_contig11166.2430.1 vs. uniprot
Match: UPI001CF143B2 (probable ubiquitin carboxyl-terminal hydrolase MINDY-4 isoform X1 n=2 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF143B2) HSP 1 Score: 99.8 bits (247), Expect = 5.450e-19 Identity = 44/98 (44.90%), Postives = 67/98 (68.37%), Query Frame = 1
Query: 871 ANGVRQLVFGDRSKSFNDAWREQGFYFSSVNGLRYGLIQAEGGPCGVLAAVQAFILENMIFGDNVDNGEGLDWRNPKKSHRERSLASALGNVIWRAGD 1164
A G++ L+FG+ SF WR+Q F F + GL YG++Q +GGPCGVLA+VQ F+L++++FG V+ G+ +P R ++LASA+ ++WRAGD
Sbjct: 384 AMGLKTLIFGNGKTSFAPEWRKQAFSFCDLYGLEYGIVQLKGGPCGVLASVQGFVLKHLLFG--VNKGDVKKKLHPSSRERTKALASAISEILWRAGD 479
BLAST of mRNA_M-pyrifera_M_contig11166.2430.1 vs. uniprot
Match: UPI00077AA32A (protein FAM188B-like n=2 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077AA32A) HSP 1 Score: 99.4 bits (246), Expect = 7.790e-19 Identity = 44/98 (44.90%), Postives = 67/98 (68.37%), Query Frame = 1
Query: 871 ANGVRQLVFGDRSKSFNDAWREQGFYFSSVNGLRYGLIQAEGGPCGVLAAVQAFILENMIFGDNVDNGEGLDWRNPKKSHRERSLASALGNVIWRAGD 1164
A G++ L+FG+ SF WR+Q F F + GL YG++Q +GGPCGVLA+VQ F+L++++FG V+ G+ +P R ++LASA+ ++WRAGD
Sbjct: 273 AMGLKTLIFGNGKTSFAPEWRKQAFSFCDLYGLEYGIVQLKGGPCGVLASVQGFVLKHLLFG--VNKGDVKKKLHPSSRERTKALASAVSEILWRAGD 368
BLAST of mRNA_M-pyrifera_M_contig11166.2430.1 vs. uniprot
Match: A0A329SYU0_9STRA (Myb-like domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SYU0_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 1.620e-18 Identity = 42/93 (45.16%), Postives = 63/93 (67.74%), Query Frame = 1
Query: 880 VRQLVFGDRSKSFNDAWREQGFYFSSVNGLRYGLIQAEGGPCGVLAAVQAFILENMIFGDNVDNGEGLDWRNPKKSHRERSLASALGNVIWRA 1158
V+QL+FG K+F+ W EQGF FS+V L+YGL+Q +GGPCG+LA VQ ++L ++ +DW+NP H+ER+L AL +++W+A
Sbjct: 304 VQQLLFGANKKAFSSHWEEQGFVFSTVRDLQYGLVQYQGGPCGILAVVQGYVLRFLL------QYAPVDWKNPGVPHQERALVQALAHILWQA 390
BLAST of mRNA_M-pyrifera_M_contig11166.2430.1 vs. uniprot
Match: A0A5D6XW99_9STRA (DUF4205 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XW99_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 2.310e-18 Identity = 45/105 (42.86%), Postives = 67/105 (63.81%), Query Frame = 1
Query: 859 TEMQANGVRQLVFGDRSKSFNDAWREQGFYFSSVNGLRYGLIQAEGGPCGVLAAVQAFILENMIFGDNVDNGEGLDWRNPKKSHRERSLASALGNVIWRAGDGHT 1173
T + ++QL+F +K F+ W +QGF+FS V LRYGL+Q EGGPCGVLA VQA++L ++ +G DWRNP + +E +L +AL +++ +A G T
Sbjct: 335 TPQEVASLQQLLFASVTKGFSPHWDQQGFFFSDVANLRYGLVQYEGGPCGVLAVVQAYVLRFLLT-----SGTSCDWRNPDAAQQETALVAALAHILHQAAGGPT 434 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11166.2430.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig11166.2430.1 >prot_M-pyrifera_M_contig11166.2430.1 ID=prot_M-pyrifera_M_contig11166.2430.1|Name=mRNA_M-pyrifera_M_contig11166.2430.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=391bp VKALRQALKDVPSSGVDKNERFRRVSALVGGRHSKKDCYDKYKKELKAETback to top mRNA from alignment at M-pyrifera_M_contig11166:489..5104+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig11166.2430.1 ID=mRNA_M-pyrifera_M_contig11166.2430.1|Name=mRNA_M-pyrifera_M_contig11166.2430.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4616bp|location=Sequence derived from alignment at M-pyrifera_M_contig11166:489..5104+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig11166:489..5104+ >mRNA_M-pyrifera_M_contig11166.2430.1 ID=mRNA_M-pyrifera_M_contig11166.2430.1|Name=mRNA_M-pyrifera_M_contig11166.2430.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2346bp|location=Sequence derived from alignment at M-pyrifera_M_contig11166:489..5104+ (Macrocystis pyrifera P11B4 male)back to top |