mRNA_M-pyrifera_M_contig111630.2419.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig111630.2419.1 vs. uniprot
Match: UPI000A2A493B (uncharacterized hydrolase YOR131C n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A493B) HSP 1 Score: 66.2 bits (160), Expect = 2.060e-11 Identity = 33/73 (45.21%), Postives = 47/73 (64.38%), Query Frame = 1
Query: 1 VDHFLDRI----SVEGALRVTVTRDFLPCKPHPAPLLHICEQLTVDPAHTVMVGDYVDDLTCAKAAGAQAVLI 207
VD FL ++ S G +TRDF+P KP PAP+ HIC++ +DP + +MVGD+V D+TC AG+ VL+
Sbjct: 140 VDIFLKKLGDPSSYGGPFSHLLTRDFIPSKPDPAPIRHICKEWNLDPRNVIMVGDHVHDITCGLDAGSVTVLV 212
BLAST of mRNA_M-pyrifera_M_contig111630.2419.1 vs. uniprot
Match: A0A4P9XS50_9FUNG (Haloacid dehalogenase-like hydrolase n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XS50_9FUNG) HSP 1 Score: 65.1 bits (157), Expect = 4.730e-11 Identity = 35/69 (50.72%), Postives = 42/69 (60.87%), Query Frame = 1
Query: 1 VDHFLDRISVEGALRVTVTRDFLPCKPHPAPLLHICEQLTVDPAHTVMVGDYVDDLTCAKAAGAQAVLI 207
V HFL VTRDFLP KP P PLLHI + P +MVGD++DDL CA+AAGA +VL+
Sbjct: 127 VQHFLALREPHHRFDPLVTRDFLPPKPAPDPLLHIARTWGIAPEELLMVGDHLDDLACARAAGAASVLL 195
BLAST of mRNA_M-pyrifera_M_contig111630.2419.1 vs. uniprot
Match: A0A5A8CQT4_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CQT4_CAFRO) HSP 1 Score: 63.2 bits (152), Expect = 2.420e-10 Identity = 28/56 (50.00%), Postives = 36/56 (64.29%), Query Frame = 1
Query: 22 ISVEGALRVTVTRDFLPCKPHPAPLLHICEQLTVDPAHTVMVGDYVDDLTCAKAAG 189
+ +E V ++R F PCKPHPAPLLHI E++ P MVGD +DD+ C AAG
Sbjct: 95 VRIEHDFDVALSRSFEPCKPHPAPLLHILERVGASPKEAAMVGDSLDDMDCGNAAG 150
BLAST of mRNA_M-pyrifera_M_contig111630.2419.1 vs. uniprot
Match: A0A1Y2H8V7_9FUNG (HAD-like domain-containing protein (Fragment) n=1 Tax=Catenaria anguillulae PL171 TaxID=765915 RepID=A0A1Y2H8V7_9FUNG) HSP 1 Score: 62.0 bits (149), Expect = 2.430e-10 Identity = 35/66 (53.03%), Postives = 42/66 (63.64%), Query Frame = 1
Query: 1 VDHFLDRISVEGALRVTVTRDFL-PCKPHPAPLLHICEQL-TVDPAHTVMVGDYVDDLTCAKAAGA 192
V H L + T++RD + P KPHP PLLHI + VDPAH +MVGD VDD+ CAKAAGA
Sbjct: 97 VTHLLTHHANGYTFHPTISRDCVQPTKPHPDPLLHIARNVWQVDPAHVLMVGDGVDDVACAKAAGA 162
BLAST of mRNA_M-pyrifera_M_contig111630.2419.1 vs. uniprot
Match: A0A2B4SPX9_STYPI (Haloacid dehalogenase-like hydrolase domain-containing protein n=2 Tax=Pocilloporidae TaxID=46729 RepID=A0A2B4SPX9_STYPI) HSP 1 Score: 62.4 bits (150), Expect = 5.870e-10 Identity = 29/58 (50.00%), Postives = 40/58 (68.97%), Query Frame = 1
Query: 34 GALRVTVTRDFLPCKPHPAPLLHICEQLTVDPAHTVMVGDYVDDLTCAKAAGAQAVLI 207
G L ++TR+F P KP PAPLLHIC V P + VMVGD++ D+ C K+AG+ +L+
Sbjct: 154 GPLTHSLTREFTPPKPDPAPLLHICRDWGVHPKNVVMVGDHLHDIQCGKSAGSVTILL 211
BLAST of mRNA_M-pyrifera_M_contig111630.2419.1 vs. uniprot
Match: A0A4P9Z1F1_9FUNG (HAD-like domain-containing protein n=1 Tax=Syncephalis pseudoplumigaleata TaxID=1712513 RepID=A0A4P9Z1F1_9FUNG) HSP 1 Score: 59.7 bits (143), Expect = 2.980e-9 Identity = 32/69 (46.38%), Postives = 41/69 (59.42%), Query Frame = 1
Query: 1 VDHFLDRISVEGALRVTVTRDFLPCKPHPAPLLHICEQLTVDPAHTVMVGDYVDDLTCAKAAGAQAVLI 207
V HFL + VTR+F P KP P PLLHI + + P +MVGD++DDL CA+ AGA VL+
Sbjct: 85 VAHFLSLREPAHQFDILVTREFQPPKPAPDPLLHIAKAWNIRPDELMMVGDHLDDLYCARDAGAVGVLL 153
BLAST of mRNA_M-pyrifera_M_contig111630.2419.1 vs. uniprot
Match: A0A4P9Y2Y1_9FUNG (HAD-like domain-containing protein n=1 Tax=Piptocephalis cylindrospora TaxID=1907219 RepID=A0A4P9Y2Y1_9FUNG) HSP 1 Score: 58.2 bits (139), Expect = 1.600e-8 Identity = 29/52 (55.77%), Postives = 34/52 (65.38%), Query Frame = 1
Query: 52 VTRDFLPCKPHPAPLLHICEQLTVDPAHTVMVGDYVDDLTCAKAAGAQAVLI 207
VTR FLP KPHP PL HI P +MVGD+ DDL+CAK AG+ VL+
Sbjct: 133 VTRAFLPTKPHPDPLFHIARTWGFAPEELMMVGDFGDDLSCAKGAGSVGVLL 184
BLAST of mRNA_M-pyrifera_M_contig111630.2419.1 vs. uniprot
Match: UPI000955CE02 (HAD family hydrolase n=1 Tax=Pseudomonas alcaligenes TaxID=43263 RepID=UPI000955CE02) HSP 1 Score: 57.4 bits (137), Expect = 2.580e-8 Identity = 30/55 (54.55%), Postives = 36/55 (65.45%), Query Frame = 1
Query: 43 RVTVTRDFLPCKPHPAPLLHICEQLTVDPAHTVMVGDYVDDLTCAKAAGAQAVLI 207
R + RD P KPHP LLH+ + V P+ VMVGDY DL CA+AAGAQ VL+
Sbjct: 122 RDVIGRDEAPPKPHPGGLLHLAARWQVQPSALVMVGDYRFDLDCARAAGAQGVLV 176
BLAST of mRNA_M-pyrifera_M_contig111630.2419.1 vs. uniprot
Match: UPI0016663952 (phosphoglycolate phosphatase n=1 Tax=Oceanisphaera marina TaxID=2017550 RepID=UPI0016663952) HSP 1 Score: 57.8 bits (138), Expect = 2.610e-8 Identity = 26/42 (61.90%), Postives = 32/42 (76.19%), Query Frame = 1
Query: 76 KPHPAPLLHICEQLTVDPAHTVMVGDYVDDLTCAKAAGAQAV 201
KPHPAPLLH+CE L + P H++MVGD +D+ AKAAG AV
Sbjct: 153 KPHPAPLLHVCETLNISPEHSIMVGDSENDVLSAKAAGMAAV 194
BLAST of mRNA_M-pyrifera_M_contig111630.2419.1 vs. uniprot
Match: A0A0K9RYN1_SPIOL (Uncharacterized protein n=7 Tax=Chenopodioideae TaxID=1307796 RepID=A0A0K9RYN1_SPIOL) HSP 1 Score: 57.8 bits (138), Expect = 2.690e-8 Identity = 27/53 (50.94%), Postives = 35/53 (66.04%), Query Frame = 1
Query: 52 VTRDFLPCKPHPAPLLHICEQLTVDPAHTVMVGDYV-DDLTCAKAAGAQAVLI 207
++R+FLPCKP PAPLLHIC P +M+GD + DD+ C K AGA L+
Sbjct: 148 LSREFLPCKPDPAPLLHICSNWEFQPNEVIMIGDSLKDDVACGKRAGAYTCLL 200 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig111630.2419.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig111630.2419.1 >prot_M-pyrifera_M_contig111630.2419.1 ID=prot_M-pyrifera_M_contig111630.2419.1|Name=mRNA_M-pyrifera_M_contig111630.2419.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=69bp VDHFLDRISVEGALRVTVTRDFLPCKPHPAPLLHICEQLTVDPAHTVMVGback to top mRNA from alignment at M-pyrifera_M_contig111630:5..211+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig111630.2419.1 ID=mRNA_M-pyrifera_M_contig111630.2419.1|Name=mRNA_M-pyrifera_M_contig111630.2419.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=207bp|location=Sequence derived from alignment at M-pyrifera_M_contig111630:5..211+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig111630:5..211+ >mRNA_M-pyrifera_M_contig111630.2419.1 ID=mRNA_M-pyrifera_M_contig111630.2419.1|Name=mRNA_M-pyrifera_M_contig111630.2419.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=414bp|location=Sequence derived from alignment at M-pyrifera_M_contig111630:5..211+ (Macrocystis pyrifera P11B4 male)back to top |