mRNA_M-pyrifera_M_contig111507.2390.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig111507.2390.1
Unique NamemRNA_M-pyrifera_M_contig111507.2390.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig111507.2390.1 vs. uniprot
Match: A0A518A0P1_9PLAN (Orotidine 5'-phosphate decarboxylase n=13 Tax=Gimesia TaxID=1649453 RepID=A0A518A0P1_9PLAN)

HSP 1 Score: 255 bits (652), Expect = 2.490e-82
Identity = 125/174 (71.84%), Postives = 139/174 (79.89%), Query Frame = 1
Query:    1 TVNPYLGSDTLQPFVDIATERGAGLYVLVRTSNPGAGTFQDRVTDGTSLFEHVAKAVESLASQTSGGDRYGPIGAVVGATYPDELRQLRNIMPHVPLLVPGYGSQGGSAADVAGAFDVEGLGAVVNSSRGIIFAAEKEPYRSQYGPDNWEQAVEAATQAMIKDLAEHTPTSVLR 522
            TVNPYLGSDTL+PFV +A ERGAG+YVLVRTSNPGAGTFQDR TDG +L+E VA  V  LA  T+G   YG IGAVVGATYP+EL QLR +MPH PLLVPGYGSQG  A DVAGAFD+EGLGA++NSSRGI FA  K PY  ++ P+ WEQAVEAAT  MI DLAEHTP   LR
Sbjct:  163 TVNPYLGSDTLEPFVKVAVERGAGIYVLVRTSNPGAGTFQDRQTDGHTLYECVAAVVNDLALNTTGEGNYGAIGAVVGATYPEELSQLRALMPHAPLLVPGYGSQGAGAGDVAGAFDIEGLGAIINSSRGINFAIRKAPYSEKFAPEEWEQAVEAATHDMIADLAEHTPAGNLR 336          
BLAST of mRNA_M-pyrifera_M_contig111507.2390.1 vs. uniprot
Match: A0A517WUJ4_9PLAN (Orotidine 5'-phosphate decarboxylase n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WUJ4_9PLAN)

HSP 1 Score: 254 bits (648), Expect = 4.930e-82
Identity = 125/173 (72.25%), Postives = 138/173 (79.77%), Query Frame = 1
Query:    1 TVNPYLGSDTLQPFVDIATERGAGLYVLVRTSNPGAGTFQDRVTDGTSLFEHVAKAVESLASQTSGGDRYGPIGAVVGATYPDELRQLRNIMPHVPLLVPGYGSQGGSAADVAGAFDVEGLGAVVNSSRGIIFAAEKEPYRSQYGPDNWEQAVEAATQAMIKDLAEHTPTSVL 519
            TVNPYLGSDTL+PFV++ATERGAG+YVLVRTSNPGAGTFQDR TDGT+L+E VA  VE LA +T G   YG IGAVVGATYP+EL QLR +MPH PLLVPGYGSQG  A DVAGAFD  GLGA++NSSRGI FA  K PY  ++ P  WEQAVEAAT  MI DLA HTP   L
Sbjct:  140 TVNPYLGSDTLEPFVNVATERGAGIYVLVRTSNPGAGTFQDRKTDGTNLYECVAGVVEELALKTKGAGNYGAIGAVVGATYPEELSQLRALMPHTPLLVPGYGSQGAGAGDVAGAFDEGGLGAIINSSRGINFAIRKSPYSEKFSPTEWEQAVEAATHDMISDLATHTPAGNL 312          
BLAST of mRNA_M-pyrifera_M_contig111507.2390.1 vs. uniprot
Match: A6CCG2_9PLAN (Orotidine 5'-phosphate decarboxylase n=7 Tax=Planctomycetaceae TaxID=126 RepID=A6CCG2_9PLAN)

HSP 1 Score: 253 bits (647), Expect = 6.980e-82
Identity = 125/174 (71.84%), Postives = 139/174 (79.89%), Query Frame = 1
Query:    1 TVNPYLGSDTLQPFVDIATERGAGLYVLVRTSNPGAGTFQDRVTDGTSLFEHVAKAVESLASQTSGGDRYGPIGAVVGATYPDELRQLRNIMPHVPLLVPGYGSQGGSAADVAGAFDVEGLGAVVNSSRGIIFAAEKEPYRSQYGPDNWEQAVEAATQAMIKDLAEHTPTSVLR 522
            TVNPYLGSDTL+PFV+IA ERGAG+YVLVRTSNPGAGTFQDR TDGT+L+E VA AVE LA +T G   YG IGAVVGATYP+EL QLR +MPH PLLVPGYGSQG  A DVAGAFD +GLGA++NSSRGI FA  K PY  ++ P  WEQAVE AT  MI DLA HTP   L+
Sbjct:  140 TVNPYLGSDTLEPFVNIAIERGAGIYVLVRTSNPGAGTFQDRKTDGTNLYECVAAAVEELAVKTKGAGNYGSIGAVVGATYPEELNQLRALMPHTPLLVPGYGSQGAGAGDVAGAFDNQGLGAIINSSRGINFAIRKAPYSEKFAPQEWEQAVEVATIDMIADLANHTPAGKLQ 313          
BLAST of mRNA_M-pyrifera_M_contig111507.2390.1 vs. uniprot
Match: A0A517TCC1_9PLAN (Orotidine 5'-phosphate decarboxylase n=1 Tax=Calycomorphotria hydatis TaxID=2528027 RepID=A0A517TCC1_9PLAN)

HSP 1 Score: 246 bits (629), Expect = 3.970e-79
Identity = 124/177 (70.06%), Postives = 142/177 (80.23%), Query Frame = 1
Query:    1 TVNPYLGSDTLQPFVDIATERGAGLYVLVRTSNPGAGTFQDRVTD---GTSLFEHVAKAVESLASQTSGGDRYGPIGAVVGATYPDELRQLRNIMPHVPLLVPGYGSQGGSAADVAGAFDVEGLGAVVNSSRGIIFAAEKEPYRSQYGPDNWEQAVEAATQAMIKDLAEHTPTSVLR 522
            TVNPYLG DTL+PFV++A ERGAG+YVLVRTSNPG+G FQ+ +TD   G S++ HVA AVE LASQ + G  YGPIGAVVGATYP EL +LR  MPHVPLL+PGYGSQGG+AADVA  FD +GLGAVVNSSRGI FA  K PY+ Q+G D WE A EAAT+ MIKDLA HTP  VL+
Sbjct:  139 TVNPYLGVDTLEPFVNVAVERGAGIYVLVRTSNPGSGAFQN-LTDRESGQSVYRHVASAVEQLASQHAEGSDYGPIGAVVGATYPQELAELREAMPHVPLLIPGYGSQGGTAADVAAGFDDQGLGAVVNSSRGINFAFRKSPYKEQFGEDQWEAAAEAATRDMIKDLATHTPAGVLQ 314          
BLAST of mRNA_M-pyrifera_M_contig111507.2390.1 vs. uniprot
Match: A0A3E0PUT6_9BACT (Orotidine 5'-phosphate decarboxylase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3E0PUT6_9BACT)

HSP 1 Score: 242 bits (617), Expect = 2.770e-77
Identity = 120/174 (68.97%), Postives = 139/174 (79.89%), Query Frame = 1
Query:    1 TVNPYLGSDTLQPFVDIATERGAGLYVLVRTSNPGAGTFQDRVTDGTSLFEHVAKAVESLASQTSGGDRYGPIGAVVGATYPDELRQLRNIMPHVPLLVPGYGSQGGSAADVAGAFDVEGLGAVVNSSRGIIFAAEKEPYRSQYGPDNWEQAVEAATQAMIKDLAEHTPTSVLR 522
            TVNPYLG+DTLQPFV  A  RGAG+YVLVRTSNPGAG FQDR T+G +LFE VA+ VE LA   + GD +GP+GAVVGATYP+EL  LR  MPHVPLL+PGYGSQGG+AADVAG F  +GLGAVVNSSRGIIFA  + PY  ++   +WE+AVEAAT  MI+DLA+HTP   LR
Sbjct:  140 TVNPYLGADTLQPFVSTAVARGAGIYVLVRTSNPGAGHFQDRRTEGEALFECVAQTVEELARGDATGDDFGPVGAVVGATYPEELAALRLQMPHVPLLIPGYGSQGGTAADVAGGFREDGLGAVVNSSRGIIFAYHRAPYEDRFPAKDWERAVEAATHDMIQDLADHTPAGALR 313          
BLAST of mRNA_M-pyrifera_M_contig111507.2390.1 vs. uniprot
Match: A0A517ZI96_9PLAN (Orotidine 5'-phosphate decarboxylase n=3 Tax=Symmachiella TaxID=2795780 RepID=A0A517ZI96_9PLAN)

HSP 1 Score: 236 bits (603), Expect = 3.330e-75
Identity = 114/173 (65.90%), Postives = 131/173 (75.72%), Query Frame = 1
Query:    1 TVNPYLGSDTLQPFVDIATERGAGLYVLVRTSNPGAGTFQDRVTDGTSLFEHVAKAVESLASQTSGGDRYGPIGAVVGATYPDELRQLRNIMPHVPLLVPGYGSQGGSAADVAGAFDVEGLGAVVNSSRGIIFAAEKEPYRSQYGPDNWEQAVEAATQAMIKDLAEHTPTSVL 519
            TVNPYLG DTLQPFVD+A +R AGLYVLVRTSNPGA  FQD + DG + + HVA AVE LA +T G   YG +GAVVGATYP EL +LR  MPH   L+PGYGSQGG+A D+A AFD +GLGA+VNSSRGIIFA     Y+ Q+ P+ WE AVEAAT+ MI DLAEHTP   L
Sbjct:  140 TVNPYLGPDTLQPFVDVAVKREAGLYVLVRTSNPGAAGFQDLIADGQTHYRHVAAAVEQLAQETRGEQTYGAVGAVVGATYPQELAELRAAMPHTHFLIPGYGSQGGTAQDIAAAFDADGLGAIVNSSRGIIFAYNNAKYKDQFAPEQWESAVEAATRDMIADLAEHTPAGAL 312          
BLAST of mRNA_M-pyrifera_M_contig111507.2390.1 vs. uniprot
Match: A0A517R6S4_9BACT (Orotidine 5'-phosphate decarboxylase n=1 Tax=Planctomycetes bacterium Pan189 TaxID=2527980 RepID=A0A517R6S4_9BACT)

HSP 1 Score: 236 bits (602), Expect = 4.570e-75
Identity = 117/174 (67.24%), Postives = 133/174 (76.44%), Query Frame = 1
Query:    1 TVNPYLGSDTLQPFVDIATERGAGLYVLVRTSNPGAGTFQDRVTDGTSLFEHVAKAVESLASQTSGGDRYGPIGAVVGATYPDELRQLRNIMPHVPLLVPGYGSQGGSAADVAGAFDVEGLGAVVNSSRGIIFAAEKEPYRSQYGPDNWEQAVEAATQAMIKDLAEHTPTSVLR 522
            TVNPYLG+DTLQPFVD+ATERG G+YVLVRTSNPGA  FQDR  DG  LFE V   VE LA +TS    YG +GAVVGATYP EL  LR  MPH PLLVPGYGSQGG+AADVA +FD  GLGAV+NSSR I FA   E Y +++G + WE+A EAAT+AMI DLA+ TP S L+
Sbjct:  139 TVNPYLGTDTLQPFVDVATERGGGIYVLVRTSNPGASAFQDRSEDGQKLFETVGSEVERLARETSAEANYGCVGAVVGATYPAELAALREAMPHTPLLVPGYGSQGGTAADVASSFDTSGLGAVINSSRAINFAFRAEQYATEFGEERWEEAAEAATRAMISDLADLTPASALQ 312          
BLAST of mRNA_M-pyrifera_M_contig111507.2390.1 vs. uniprot
Match: A0A517Z568_9PLAN (Orotidine 5'-phosphate decarboxylase n=1 Tax=Maioricimonas rarisocia TaxID=2528026 RepID=A0A517Z568_9PLAN)

HSP 1 Score: 235 bits (600), Expect = 1.010e-74
Identity = 111/173 (64.16%), Postives = 137/173 (79.19%), Query Frame = 1
Query:    1 TVNPYLGSDTLQPFVDIATERGAGLYVLVRTSNPGAGTFQDRVTDGTSLFEHVAKAVESLASQTSGGDRYGPIGAVVGATYPDELRQLRNIMPHVPLLVPGYGSQGGSAADVAGAFDVEGLGAVVNSSRGIIFAAEKEPYRSQYGPDNWEQAVEAATQAMIKDLAEHTPTSVL 519
            T+NPYLG DTL+PFV  AT RGAGLYVLVRTSNPGAG FQD   DG +++ HVA A+E LA++++G  +YG +GAVVGATYP EL +LR +MPHVPLL+PGYGSQGG++AD A AFD +G GA++NSSRGIIFA  +EPY   +G   WE AV+AAT+ MI DLA +TP + L
Sbjct:  140 TINPYLGVDTLEPFVRTATARGAGLYVLVRTSNPGAGRFQDLTADGQTVYHHVATAMEELAAESAGEGQYGAVGAVVGATYPSELEELRQVMPHVPLLIPGYGSQGGTSADTAAAFDEDGHGALINSSRGIIFAYRREPYAEAFGESQWEAAVDAATRDMIADLAANTPAAAL 312          
BLAST of mRNA_M-pyrifera_M_contig111507.2390.1 vs. uniprot
Match: UPI0014220675 (orotidine-5'-phosphate decarboxylase n=1 Tax=Rubinisphaera sp. JC658 TaxID=2713176 RepID=UPI0014220675)

HSP 1 Score: 231 bits (588), Expect = 5.830e-73
Identity = 113/173 (65.32%), Postives = 133/173 (76.88%), Query Frame = 1
Query:    1 TVNPYLGSDTLQPFVDIATERGAGLYVLVRTSNPGAGTFQDRVTDGTSLFEHVAKAVESLASQTSGGDRYGPIGAVVGATYPDELRQLRNIMPHVPLLVPGYGSQGGSAADVAGAFDVEGLGAVVNSSRGIIFAAEKEPYRSQYGPDNWEQAVEAATQAMIKDLAEHTPTSVL 519
            TVNPYLG+DTL+PFVD+ATERG G+YVLVRTSNPGAGTFQDR+TDG   +  VAK V  LA +T+  D YG +GAVVGATYP+EL +LR ++   PLL+PGYGSQGGSAAD A AF  +GLGAV+NSSRGI FA  K  Y  ++ P  WEQA+EAAT  MI DL  HTP + L
Sbjct:  140 TVNPYLGADTLEPFVDVATERGGGIYVLVRTSNPGAGTFQDRLTDGEPHYRTVAKTVNDLALRTADTDGYGAVGAVVGATYPNELAELREVLSASPLLIPGYGSQGGSAADTAAAFRDDGLGAVINSSRGINFAYRKPEYAERFSPTEWEQAIEAATHDMIADLKTHTPANSL 312          
BLAST of mRNA_M-pyrifera_M_contig111507.2390.1 vs. uniprot
Match: A0A4P5XPC9_9BACT (Orotidine 5'-phosphate decarboxylase n=2 Tax=Planctomycetes TaxID=203682 RepID=A0A4P5XPC9_9BACT)

HSP 1 Score: 230 bits (587), Expect = 7.550e-73
Identity = 116/170 (68.24%), Postives = 135/170 (79.41%), Query Frame = 1
Query:    1 TVNPYLGSDTLQPFVDIATERGAGLYVLVRTSNPGAGTFQDRVTDGTSLFEHVAKAVESLASQT---SG--GDRYGPIGAVVGATYPDELRQLRNIMPHVPLLVPGYGSQGGSAADVAGAFDVEGLGAVVNSSRGIIFAAEKEPYRSQYGPDNWEQAVEAATQAMIKDLA 495
            TVNPYLG DTL+PFV +A ERGAGLYVLVRTSNPGAGT QDRV DGT ++ HVA+ VE L+  T   SG  GD +G +GAVVGATYP EL +LR +MPHVPLLVPGYG+QGGSAADV  AF  +GLG ++NSSR I FA  +EPYRSQ+GPD WE AV AAT+ MI +L+
Sbjct:  140 TVNPYLGRDTLEPFVKVAAERGAGLYVLVRTSNPGAGTLQDRVADGTPIYRHVARLVEELSVSTLCQSGVAGDDFGCVGAVVGATYPAELAELREVMPHVPLLVPGYGAQGGSAADVQAAFRGDGLGTLINSSRAINFAHTREPYRSQFGPDRWEDAVAAATRDMIAELS 309          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig111507.2390.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A518A0P1_9PLAN2.490e-8271.84Orotidine 5'-phosphate decarboxylase n=13 Tax=Gime... [more]
A0A517WUJ4_9PLAN4.930e-8272.25Orotidine 5'-phosphate decarboxylase n=2 Tax=Gimes... [more]
A6CCG2_9PLAN6.980e-8271.84Orotidine 5'-phosphate decarboxylase n=7 Tax=Planc... [more]
A0A517TCC1_9PLAN3.970e-7970.06Orotidine 5'-phosphate decarboxylase n=1 Tax=Calyc... [more]
A0A3E0PUT6_9BACT2.770e-7768.97Orotidine 5'-phosphate decarboxylase n=1 Tax=Planc... [more]
A0A517ZI96_9PLAN3.330e-7565.90Orotidine 5'-phosphate decarboxylase n=3 Tax=Symma... [more]
A0A517R6S4_9BACT4.570e-7567.24Orotidine 5'-phosphate decarboxylase n=1 Tax=Planc... [more]
A0A517Z568_9PLAN1.010e-7464.16Orotidine 5'-phosphate decarboxylase n=1 Tax=Maior... [more]
UPI00142206755.830e-7365.32orotidine-5'-phosphate decarboxylase n=1 Tax=Rubin... [more]
A0A4P5XPC9_9BACT7.550e-7368.24Orotidine 5'-phosphate decarboxylase n=2 Tax=Planc... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig111507contigM-pyrifera_M_contig111507:2..526 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score253.1
Seed ortholog evalue9.7e-65
Seed eggNOG ortholog344747.PM8797T_06165
Preferred namepyrF
KEGG rclassRC00063,RC00409,RC00611
KEGG koko:K01591,ko:K13421
KEGG ReactionR00965,R01870,R08231
KEGG Pathwayko00240,ko00983,ko01100,map00240,map00983,map01100
KEGG ModuleM00051
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004590,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.Belongs to the OMP decarboxylase family. Type 2 subfamily
EggNOG OGs2IXSF@203682,COG0284@1,COG0284@2
EC2.4.2.10,4.1.1.23
COG Functional cat.F
BiGG ReactioniHN637.CLJU_RS17585
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons1
Model size525
Cds size525
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815627.472356-CDS-M-pyrifera_M_contig111507:1..5261622815627.472356-CDS-M-pyrifera_M_contig111507:1..526Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig111507 2..526 +
1692277494.44066-CDS-M-pyrifera_M_contig111507:1..5261692277494.44066-CDS-M-pyrifera_M_contig111507:1..526Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig111507 2..526 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig111507.2390.1prot_M-pyrifera_M_contig111507.2390.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig111507 2..526 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig111507.2390.1

>prot_M-pyrifera_M_contig111507.2390.1 ID=prot_M-pyrifera_M_contig111507.2390.1|Name=mRNA_M-pyrifera_M_contig111507.2390.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=175bp
TVNPYLGSDTLQPFVDIATERGAGLYVLVRTSNPGAGTFQDRVTDGTSLF
EHVAKAVESLASQTSGGDRYGPIGAVVGATYPDELRQLRNIMPHVPLLVP
GYGSQGGSAADVAGAFDVEGLGAVVNSSRGIIFAAEKEPYRSQYGPDNWE
QAVEAATQAMIKDLAEHTPTSVLR*
back to top

mRNA from alignment at M-pyrifera_M_contig111507:2..526+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig111507.2390.1 ID=mRNA_M-pyrifera_M_contig111507.2390.1|Name=mRNA_M-pyrifera_M_contig111507.2390.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=525bp|location=Sequence derived from alignment at M-pyrifera_M_contig111507:2..526+ (Macrocystis pyrifera P11B4 male)
ACGGTGAATCCGTACCTTGGCTCGGATACGCTTCAACCATTCGTCGACAT CGCGACCGAGCGTGGGGCTGGACTCTACGTGCTGGTGAGAACGAGCAACC CGGGTGCCGGAACCTTTCAGGACCGTGTGACTGATGGGACGTCTCTCTTC GAGCACGTTGCCAAGGCGGTGGAATCACTCGCCAGTCAGACATCTGGCGG TGATCGTTACGGACCGATCGGTGCAGTCGTCGGTGCCACTTACCCCGATG AACTCAGACAGCTGCGCAACATCATGCCGCATGTCCCGCTGCTGGTGCCA GGCTATGGCAGTCAAGGGGGGAGTGCAGCTGACGTCGCTGGCGCCTTTGA CGTGGAAGGCCTCGGGGCTGTCGTCAACAGTTCGCGAGGGATCATCTTCG CGGCAGAGAAGGAGCCGTACCGAAGTCAGTACGGCCCTGACAACTGGGAG CAGGCGGTAGAGGCGGCCACTCAAGCGATGATCAAAGATCTCGCGGAGCA TACTCCGACAAGTGTGCTGCGTTGA
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig111507:2..526+

>mRNA_M-pyrifera_M_contig111507.2390.1 ID=mRNA_M-pyrifera_M_contig111507.2390.1|Name=mRNA_M-pyrifera_M_contig111507.2390.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1050bp|location=Sequence derived from alignment at M-pyrifera_M_contig111507:2..526+ (Macrocystis pyrifera P11B4 male)
ACGGTGAATCCGTACCTTGGCTCGGATACGCTTCAACCATTCGTCGACAT
CGCGACCGAGCGTGGGGCTGGACTCTACGTGCTGGTGAGAACGAGCAACC
CGGGTGCCGGAACCTTTCAGGACCGTGTGACTGATGGGACGTCTCTCTTC
GAGCACGTTGCCAAGGCGGTGGAATCACTCGCCAGTCAGACATCTGGCGG
TGATCGTTACGGACCGATCGGTGCAGTCGTCGGTGCCACTTACCCCGATG
AACTCAGACAGCTGCGCAACATCATGCCGCATGTCCCGCTGCTGGTGCCA
GGCTATGGCAGTCAAGGGGGGAGTGCAGCTGACGTCGCTGGCGCCTTTGA
CGTGGAAGGCCTCGGGGCTGTCGTCAACAGTTCGCGAGGGATCATCTTCG
CGGCAGAGAAGGAGCCGTACCGAAGTCAGTACGGCCCTGACAACTGGGAG
CAGGCGGTAGAGGCGGCCACTCAAGCGATGATCAAAGATCTCGCGGAGCA
TACTCCGACAAGTGTGCTGCGTTGAACGGTGAATCCGTACCTTGGCTCGG
ATACGCTTCAACCATTCGTCGACATCGCGACCGAGCGTGGGGCTGGACTC
TACGTGCTGGTGAGAACGAGCAACCCGGGTGCCGGAACCTTTCAGGACCG
TGTGACTGATGGGACGTCTCTCTTCGAGCACGTTGCCAAGGCGGTGGAAT
CACTCGCCAGTCAGACATCTGGCGGTGATCGTTACGGACCGATCGGTGCA
GTCGTCGGTGCCACTTACCCCGATGAACTCAGACAGCTGCGCAACATCAT
GCCGCATGTCCCGCTGCTGGTGCCAGGCTATGGCAGTCAAGGGGGGAGTG
CAGCTGACGTCGCTGGCGCCTTTGACGTGGAAGGCCTCGGGGCTGTCGTC
AACAGTTCGCGAGGGATCATCTTCGCGGCAGAGAAGGAGCCGTACCGAAG
TCAGTACGGCCCTGACAACTGGGAGCAGGCGGTAGAGGCGGCCACTCAAG
CGATGATCAAAGATCTCGCGGAGCATACTCCGACAAGTGTGCTGCGTTGA
back to top