mRNA_M-pyrifera_M_contig111380.2370.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig111380.2370.1 vs. uniprot
Match: A0A7S3PM91_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PM91_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 1.580e-11 Identity = 39/98 (39.80%), Postives = 57/98 (58.16%), Query Frame = 1
Query: 16 SPPPWACKHLDPGALRELLLCLDPSNIAVVLSALLAEQFIVLLTRHPWRAAAAAEALCALLCPFEWAGVSLPLVPVPYFSRIIEAPFTGIVGVDRTAL 309
SPP + +D LL CL P +I ++S+LL+EQ I+++T HP A AEAL +L+ PFEW V +PL+ ++I APF +VG+ L
Sbjct: 116 SPPKMSLPLVDEDCFNVLLQCLSPESIVALISSLLSEQSILIVTEHPELAFPIAEALISLIFPFEWVHVYVPLLSKETI-QVINAPFPFLVGIQSKHL 212
BLAST of mRNA_M-pyrifera_M_contig111380.2370.1 vs. uniprot
Match: A0A7S4BNI6_CHRCT (Hypothetical protein n=3 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BNI6_CHRCT) HSP 1 Score: 63.5 bits (153), Expect = 1.750e-9 Identity = 41/105 (39.05%), Postives = 58/105 (55.24%), Query Frame = 1
Query: 4 VRVSSPPPWACKHLDPGALRELLL---CLDPSNIAVVLSALLAEQFIVLLTRHPWRAAAAAEALCALLCPFEWAGVSLPLVPVPYFSRIIEAPFTGIVGVDRTAL 309
V+V PP A H G R+ LL CLD +I ++ + LL EQ +VL + P AAE LCALL PF W V +P++P I++AP ++G+D+ L
Sbjct: 218 VKVEIPPSNALPHTMSG--RDFLLLFQCLDAGSIIMLWALLLVEQKVVLHAQQPHVLTMAAETLCALLFPFNWQHVYIPILPARLLD-ILQAPVPFLMGIDQEVL 319
BLAST of mRNA_M-pyrifera_M_contig111380.2370.1 vs. uniprot
Match: A0A7S3W695_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3W695_EMIHU) HSP 1 Score: 62.8 bits (151), Expect = 3.020e-9 Identity = 41/108 (37.96%), Postives = 58/108 (53.70%), Query Frame = 1
Query: 4 VRVSSPPPWACKHLDPGALRELLL---CLDPSNIAVVLSALLAEQFIVLLTRHPWRAAAAAEALCALLCPFEWAGVSLPLVPVPYFSRIIEAPFTGIVGVDRTALAEA 318
+ V PP H G R+ LL CLD S++ V+ + LLAEQ ++L R AAE+LCALL PF W V +P++P I++AP ++G+D L A
Sbjct: 237 IHVVIPPANELPHTMAG--RDFLLLFECLDVSSVIVLWALLLAEQKVLLQARQTHVLTMAAESLCALLFPFSWQHVYIPILPASLLD-ILQAPVPFLIGIDEEVLGMA 341
BLAST of mRNA_M-pyrifera_M_contig111380.2370.1 vs. uniprot
Match: A0A6V4EW16_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A6V4EW16_9EUKA) HSP 1 Score: 57.0 bits (136), Expect = 3.400e-7 Identity = 35/89 (39.33%), Postives = 51/89 (57.30%), Query Frame = 1
Query: 61 RELLL---CLDPSNIAVVLSALLAEQFIVLLTRHPWRAAAAAEALCALLCPFEWAGVSLPLVPVPYFSRIIEAPFTGIVGVDRTALAEA 318
R+ LL L+ N+ ++ + LLAEQ +VL + P AAE LCALL PF W V +P++P I++AP ++G+D LA A
Sbjct: 233 RDFLLLFQALEVGNVIMLWALLLAEQKVVLQGKQPHVLTMAAETLCALLFPFSWQHVYIPILPARLLD-ILQAPVPFLMGIDEDVLALA 320
BLAST of mRNA_M-pyrifera_M_contig111380.2370.1 vs. uniprot
Match: A0A6T8DPZ6_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A6T8DPZ6_9EUKA) HSP 1 Score: 57.0 bits (136), Expect = 3.470e-7 Identity = 35/89 (39.33%), Postives = 51/89 (57.30%), Query Frame = 1
Query: 61 RELLL---CLDPSNIAVVLSALLAEQFIVLLTRHPWRAAAAAEALCALLCPFEWAGVSLPLVPVPYFSRIIEAPFTGIVGVDRTALAEA 318
R+ LL L+ N+ ++ + LLAEQ +VL + P AAE LCALL PF W V +P++P I++AP ++G+D LA A
Sbjct: 233 RDFLLLFQALEVGNVIMLWALLLAEQKVVLQGKQPHVLTMAAETLCALLFPFSWQHVYIPILPARLLD-ILQAPVPFLMGIDEDVLALA 320
BLAST of mRNA_M-pyrifera_M_contig111380.2370.1 vs. uniprot
Match: A0A0L0DLK6_THETB (UDENN domain-containing protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DLK6_THETB) HSP 1 Score: 54.3 bits (129), Expect = 3.130e-6 Identity = 34/88 (38.64%), Postives = 50/88 (56.82%), Query Frame = 1
Query: 52 GALRELLLCLDPSNIAVVLSALLAEQFIVLLTRHPWRAAAAAEALCALLCPFEWAGVSLPLVPVPYFSRIIEAPFTGIVGVDRTALAE 315
GALR L L P ++A +L ALL E +VL++ P ++AA A ALL PF W V +P+VP ++ + AP I+G +A+
Sbjct: 263 GALRLTTLALSPPDLADILLALLLEAKLVLVSSSPGMLSSAALAALALLAPFPWPYVFVPIVPA-VMTQYLAAPTPFIMGASPVTVAD 349
BLAST of mRNA_M-pyrifera_M_contig111380.2370.1 vs. uniprot
Match: A0A0M0J5W4_9EUKA (Calmodulin-binding protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J5W4_9EUKA) HSP 1 Score: 53.9 bits (128), Expect = 4.120e-6 Identity = 31/82 (37.80%), Postives = 47/82 (57.32%), Query Frame = 1
Query: 64 ELLLCLDPSNIAVVLSALLAEQFIVLLTRHPWRAAAAAEALCALLCPFEWAGVSLPLVPVPYFSRIIEAPFTGIVGVDRTAL 309
+L LD +N+ ++ + LL EQ +VL P AAE L ALL PF W V +P++P+ I++AP +VG+D+ L
Sbjct: 59 QLFQALDANNVIMLWALLLTEQKVVLQCTQPHVLTMAAETLSALLFPFSWQHVYIPILPMRLID-ILQAPVPFLVGIDKEIL 139
BLAST of mRNA_M-pyrifera_M_contig111380.2370.1 vs. uniprot
Match: A0A8B7NCV9_HYAAZ (DENN domain-containing protein 5A-like n=2 Tax=Hyalella azteca TaxID=294128 RepID=A0A8B7NCV9_HYAAZ) HSP 1 Score: 53.9 bits (128), Expect = 4.330e-6 Identity = 30/87 (34.48%), Postives = 49/87 (56.32%), Query Frame = 1
Query: 58 LRELLLCLDPSNIAVVLSALLAEQFIVLLTRHPWRAAAAAEALCALLCPFEWAGVSLPLVPVPYFSRIIEAPFTGIVGVDRTALAEA 318
LREL L P + +LS ++ E I+L++ +R AE +CAL+ PF W V +P++P S ++AP I+G+ T A++
Sbjct: 273 LRELFSVLSPECVVQLLSCIVLENQILLVSADYYRLMLVAECMCALVLPFSWHHVYVPILPAA-LSHFLDAPVPFIMGLHATPAAKS 358
BLAST of mRNA_M-pyrifera_M_contig111380.2370.1 vs. uniprot
Match: A0A3P3YNM5_PLABS (Uncharacterized protein n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YNM5_PLABS) HSP 1 Score: 53.5 bits (127), Expect = 5.820e-6 Identity = 34/103 (33.01%), Postives = 53/103 (51.46%), Query Frame = 1
Query: 4 VRVSSPPPWACKHLDPGALRELLLCLDPSNIAVVLSALLAEQFIVLLTRHPWRAAAAAEALCALLCPFEWAGVSLPLVPVPYFSRIIEAPFTGIVGVDRTALA 312
+R++ PPP A D L L CLD +N+ + +A L EQ ++L + AE++ AL+ PF W GV +P++P + I +P I GV L+
Sbjct: 352 IRLTRPPPNALPLAD-VRLSTLFQCLDLNNVVALFTAALTEQKVLLCSTQSAALVDVAESITALIFPFYWQGVYVPVLP-RRLAEFIHSPVPFIAGVSSALLS 452
BLAST of mRNA_M-pyrifera_M_contig111380.2370.1 vs. uniprot
Match: A0A7S1CC59_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CC59_9STRA) HSP 1 Score: 53.1 bits (126), Expect = 7.690e-6 Identity = 34/89 (38.20%), Postives = 49/89 (55.06%), Query Frame = 1
Query: 58 LRELLLCLDPSNIAVVLSALLAEQFIVLLTRHPWRAAAAAEALCALLCPFEWAGVSLPLVPVPYFSRIIE---APFTGIVGVDRTALAE 315
LR LL LD ++ V+S LL EQ +++++ H A E L +L P EW V +PL+P SR++ APF ++GV T L E
Sbjct: 276 LRPLLAALDVGDLLTVVSCLLCEQRVLVVSAHKALLTTACEGLMSLCYPLEWVNVYVPLLP----SRLLAYLGAPFPFLIGVLSTQLKE 360 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig111380.2370.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig111380.2370.1 >prot_M-pyrifera_M_contig111380.2370.1 ID=prot_M-pyrifera_M_contig111380.2370.1|Name=mRNA_M-pyrifera_M_contig111380.2370.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=107bp VVRVSSPPPWACKHLDPGALRELLLCLDPSNIAVVLSALLAEQFIVLLTRback to top mRNA from alignment at M-pyrifera_M_contig111380:241..561- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig111380.2370.1 ID=mRNA_M-pyrifera_M_contig111380.2370.1|Name=mRNA_M-pyrifera_M_contig111380.2370.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=321bp|location=Sequence derived from alignment at M-pyrifera_M_contig111380:241..561- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig111380:241..561- >mRNA_M-pyrifera_M_contig111380.2370.1 ID=mRNA_M-pyrifera_M_contig111380.2370.1|Name=mRNA_M-pyrifera_M_contig111380.2370.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=642bp|location=Sequence derived from alignment at M-pyrifera_M_contig111380:241..561- (Macrocystis pyrifera P11B4 male)back to top |