mRNA_M-pyrifera_M_contig111320.2361.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig111320.2361.1 vs. uniprot
Match: A0A3D5DFA2_9GAMM (Amidophosphoribosyltransferase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DFA2_9GAMM) HSP 1 Score: 336 bits (862), Expect = 1.950e-111 Identity = 165/197 (83.76%), Postives = 179/197 (90.86%), Query Frame = 1
Query: 1 GIIGLRDPHGIRPIVYGKRETEQGTEYMIASESVAIDVLGFELLGDIAPGEVVFISKAGELQRRQCAPAQEMAPCIFEHVYLARPDSIIDGISVHKARMRMGESLARKIQREWPDHGVDVVIPIPDTSRTAALELAHELGVKYREGFIKNRYIPRTFIMPGQALRRKSVRQKLTAIDLAFEGKNVLLVDDSIVRGTT 591
GIIG RDPHGIRPIVYGKRET+ G EYMIASESVAIDVLGFEL+GDIAPGE +FISK GEL+ + CAP + MAPCIFE+VYLARPDSIIDGISV +ARMRMGE+LARKI+REW +H +DVVIPIPDTSRTAALELAHEL V YREGF+KNRYIPRTFIMPGQ+LRRKSVRQKL AI L FE KNVLLVDDSIVRGTT
Sbjct: 177 GIIGFRDPHGIRPIVYGKRETDLGVEYMIASESVAIDVLGFELIGDIAPGEAIFISKEGELETKLCAPEKGMAPCIFEYVYLARPDSIIDGISVQQARMRMGEALARKIRREWGEHDIDVVIPIPDTSRTAALELAHELKVNYREGFVKNRYIPRTFIMPGQSLRRKSVRQKLNAISLEFENKNVLLVDDSIVRGTT 373
BLAST of mRNA_M-pyrifera_M_contig111320.2361.1 vs. uniprot
Match: A0A523NWW9_9PROT (Amidophosphoribosyltransferase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523NWW9_9PROT) HSP 1 Score: 335 bits (859), Expect = 5.540e-111 Identity = 164/197 (83.25%), Postives = 182/197 (92.39%), Query Frame = 1
Query: 1 GIIGLRDPHGIRPIVYGKRETEQGTEYMIASESVAIDVLGFELLGDIAPGEVVFISKAGELQRRQCAPAQEMAPCIFEHVYLARPDSIIDGISVHKARMRMGESLARKIQREWPDHGVDVVIPIPDTSRTAALELAHELGVKYREGFIKNRYIPRTFIMPGQALRRKSVRQKLTAIDLAFEGKNVLLVDDSIVRGTT 591
GIIG RDP+GIRPIV+GKRET++GTEY+IASESVAIDVLGFEL+ DIAPGEVVFISK G++ ++CAP E++PCIFEHVYLARPDSIIDGISVHKARMRMGE LARKI+REW H +DVVIP+PDTSRTAALELA+ELG+KYREGFIKNRYIPRTFIMPGQALRR+SVRQKL AI L FEGK VLLVDDSIVRGTT
Sbjct: 177 GIIGFRDPYGIRPIVFGKRETDRGTEYIIASESVAIDVLGFELIRDIAPGEVVFISKEGDMHIKRCAPETELSPCIFEHVYLARPDSIIDGISVHKARMRMGEMLARKIRREWGQHDIDVVIPVPDTSRTAALELANELGLKYREGFIKNRYIPRTFIMPGQALRRRSVRQKLNAIGLEFEGKIVLLVDDSIVRGTT 373
BLAST of mRNA_M-pyrifera_M_contig111320.2361.1 vs. uniprot
Match: A0A4R6U5T7_9GAMM (Amidophosphoribosyltransferase n=2 Tax=Thiopseudomonas denitrificans TaxID=1501432 RepID=A0A4R6U5T7_9GAMM) HSP 1 Score: 320 bits (820), Expect = 1.350e-105 Identity = 154/197 (78.17%), Postives = 174/197 (88.32%), Query Frame = 1
Query: 1 GIIGLRDPHGIRPIVYGKRETEQGTEYMIASESVAIDVLGFELLGDIAPGEVVFISKAGELQRRQCAPAQEMAPCIFEHVYLARPDSIIDGISVHKARMRMGESLARKIQREWPDHGVDVVIPIPDTSRTAALELAHELGVKYREGFIKNRYIPRTFIMPGQALRRKSVRQKLTAIDLAFEGKNVLLVDDSIVRGTT 591
G++G RDPHGIRPIV+G RETEQGTEYMIASESVA+D LGF L+ D+APGE V+I++ G+L RQCA ++ PCIFEHVYLARPDSIIDGISV+KARM+MGE LA KI RE PDH +DV+IPIPDTSRT+ALELAH LGVKYREGFIKNRYI RTFIMPGQALR+KSVRQKL AI+L F GKNV+LVDDSIVRGTT
Sbjct: 144 GVVGFRDPHGIRPIVFGSRETEQGTEYMIASESVALDALGFSLIRDVAPGEAVYITEDGQLHTRQCARNPQLTPCIFEHVYLARPDSIIDGISVYKARMKMGEKLADKILRERPDHDIDVIIPIPDTSRTSALELAHRLGVKYREGFIKNRYIGRTFIMPGQALRKKSVRQKLNAIELEFRGKNVMLVDDSIVRGTT 340
BLAST of mRNA_M-pyrifera_M_contig111320.2361.1 vs. uniprot
Match: A0A7C5JAE1_9GAMM (Amidophosphoribosyltransferase (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C5JAE1_9GAMM) HSP 1 Score: 316 bits (809), Expect = 1.410e-103 Identity = 156/197 (79.19%), Postives = 175/197 (88.83%), Query Frame = 1
Query: 1 GIIGLRDPHGIRPIVYGKRETEQGTEYMIASESVAIDVLGFELLGDIAPGEVVFISKAGELQRRQCAPAQEMAPCIFEHVYLARPDSIIDGISVHKARMRMGESLARKIQREWPDHGVDVVIPIPDTSRTAALELAHELGVKYREGFIKNRYIPRTFIMPGQALRRKSVRQKLTAIDLAFEGKNVLLVDDSIVRGTT 591
GI+G RDP+GIRPIV+G+RETE+GTEYMIASESVA+DVLGFEL+ DIAPGE VFI+ GEL RQCA +PCIFE+VYLARPDSIID I V+KAR+RMGE LARKI+RE+PDH +DVVIPIPDTSRTAAL LA+ELGV YREGFIKNRYI RTFIMPGQ LR+KSVRQKL AID+ F+GKNVLLVDDSIVRGTT
Sbjct: 177 GILGFRDPYGIRPIVFGRRETERGTEYMIASESVALDVLGFELMRDIAPGEAVFITMDGELHTRQCAEHPRRSPCIFEYVYLARPDSIIDNIYVYKARLRMGERLARKIRREFPDHDIDVVIPIPDTSRTAALALANELGVNYREGFIKNRYIGRTFIMPGQQLRKKSVRQKLNAIDIEFKGKNVLLVDDSIVRGTT 373
BLAST of mRNA_M-pyrifera_M_contig111320.2361.1 vs. uniprot
Match: A0A0S2TFZ8_9GAMM (Amidophosphoribosyltransferase n=1 Tax=Candidatus Tenderia electrophaga TaxID=1748243 RepID=A0A0S2TFZ8_9GAMM) HSP 1 Score: 315 bits (808), Expect = 2.310e-103 Identity = 153/197 (77.66%), Postives = 173/197 (87.82%), Query Frame = 1
Query: 1 GIIGLRDPHGIRPIVYGKRETEQGTEYMIASESVAIDVLGFELLGDIAPGEVVFISKAGELQRRQCAPAQEMAPCIFEHVYLARPDSIIDGISVHKARMRMGESLARKIQREWPDHGVDVVIPIPDTSRTAALELAHELGVKYREGFIKNRYIPRTFIMPGQALRRKSVRQKLTAIDLAFEGKNVLLVDDSIVRGTT 591
GI+G RDPHGIRPIVYGKRET++GTEYMIASESVA+DVLGFEL+ DIAPGE V I + G L +RQCA A CIFE+VYLARPDSIID + V+KAR+RMGE+LARKI+REWPD +DVVIP+PDTSRT+AL+LA+ELGV YREGFIKNRYI RTFIMPGQ R+KSVRQKL AIDL F+GKNVLLVDDSIVRGTT
Sbjct: 177 GIVGFRDPHGIRPIVYGKRETDKGTEYMIASESVALDVLGFELIADIAPGEAVLIGRDGSLHKRQCAEKPAYATCIFEYVYLARPDSIIDDVLVYKARLRMGEALARKIEREWPDRDIDVVIPVPDTSRTSALQLANELGVLYREGFIKNRYIGRTFIMPGQTQRKKSVRQKLNAIDLEFKGKNVLLVDDSIVRGTT 373
BLAST of mRNA_M-pyrifera_M_contig111320.2361.1 vs. uniprot
Match: A0A031MH81_9GAMM (Amidophosphoribosyltransferase n=4 Tax=Pseudomonadaceae TaxID=135621 RepID=A0A031MH81_9GAMM) HSP 1 Score: 315 bits (807), Expect = 3.090e-103 Identity = 153/197 (77.66%), Postives = 172/197 (87.31%), Query Frame = 1
Query: 1 GIIGLRDPHGIRPIVYGKRETEQGTEYMIASESVAIDVLGFELLGDIAPGEVVFISKAGELQRRQCAPAQEMAPCIFEHVYLARPDSIIDGISVHKARMRMGESLARKIQREWPDHGVDVVIPIPDTSRTAALELAHELGVKYREGFIKNRYIPRTFIMPGQALRRKSVRQKLTAIDLAFEGKNVLLVDDSIVRGTT 591
GI+G RDPHGIRPIVYGKRETEQG EYM+ASESVA+DVLGFE + D+APGE VFI+ GE+ RQCA APCIFEHVYLARPDSIIDG+ V+KAR+RMGE LA KI RE PDHG+DVVIPIPDTSRT+A+ELA+ LGVK+REGF+KNRYI RTFIMPGQA R+KSVRQKL A++L F GKNVLLVDDSIVRGTT
Sbjct: 177 GIVGFRDPHGIRPIVYGKRETEQGVEYMVASESVALDVLGFETIRDLAPGEAVFITVNGEIFTRQCASDATYAPCIFEHVYLARPDSIIDGVLVYKARLRMGEKLAEKILREHPDHGIDVVIPIPDTSRTSAVELANHLGVKFREGFVKNRYIGRTFIMPGQAARKKSVRQKLNAMELEFRGKNVLLVDDSIVRGTT 373
BLAST of mRNA_M-pyrifera_M_contig111320.2361.1 vs. uniprot
Match: A0A1Y1SBU1_9GAMM (Amidophosphoribosyltransferase n=1 Tax=Oceanococcus atlanticus TaxID=1317117 RepID=A0A1Y1SBU1_9GAMM) HSP 1 Score: 315 bits (807), Expect = 3.370e-103 Identity = 151/197 (76.65%), Postives = 174/197 (88.32%), Query Frame = 1
Query: 1 GIIGLRDPHGIRPIVYGKRETEQGTEYMIASESVAIDVLGFELLGDIAPGEVVFISKAGELQRRQCAPAQEMAPCIFEHVYLARPDSIIDGISVHKARMRMGESLARKIQREWPDHGVDVVIPIPDTSRTAALELAHELGVKYREGFIKNRYIPRTFIMPGQALRRKSVRQKLTAIDLAFEGKNVLLVDDSIVRGTT 591
GI+G RDP+GIRP+VYG RET QG E++IASESVA+DVLGFELLGDIAPGE V I++ G L +RQCA E+ PCIFEHVYLARPDS++D I V+KAR+RMG+ LARKIQREWPDH +DVVIP+PDTSRTAA++LA+ELGVKYREGFIKNRYI RTFIMPGQ R+KSVRQKL IDL F+GKNV+LVDDSIVRGTT
Sbjct: 177 GIVGFRDPYGIRPVVYGVRETAQGQEHIIASESVALDVLGFELLGDIAPGEAVIITENGRLLKRQCAENPELTPCIFEHVYLARPDSVMDDIYVYKARLRMGDRLARKIQREWPDHDIDVVIPVPDTSRTAAVQLANELGVKYREGFIKNRYIGRTFIMPGQEQRKKSVRQKLNPIDLEFQGKNVMLVDDSIVRGTT 373
BLAST of mRNA_M-pyrifera_M_contig111320.2361.1 vs. uniprot
Match: A0A485FHJ5_PSEAI (Amidophosphoribosyltransferase n=2 Tax=Pseudomonas TaxID=286 RepID=A0A485FHJ5_PSEAI) HSP 1 Score: 307 bits (786), Expect = 3.600e-102 Identity = 150/197 (76.14%), Postives = 172/197 (87.31%), Query Frame = 1
Query: 1 GIIGLRDPHGIRPIVYGKRETEQGTEYMIASESVAIDVLGFELLGDIAPGEVVFISKAGELQRRQCAPAQEMAPCIFEHVYLARPDSIIDGISVHKARMRMGESLARKIQREWPDHGVDVVIPIPDTSRTAALELAHELGVKYREGFIKNRYIPRTFIMPGQALRRKSVRQKLTAIDLAFEGKNVLLVDDSIVRGTT 591
GI+G RDP+ IRPIV+G+R TE G EYMIASESVA+DVLGF L+ D+APGE V+I++ G+L RQCA A + APCIFEHVYLARPDSI+DGISV+KAR+RMGE LA KI RE PDH +DVVIPIPDTSRTAALELA+ LGVK+REGF+KNRYI RTFIMPGQA R+KSVRQKL AI+L F GKNV+LVDDSIVRGTT
Sbjct: 19 GIVGFRDPNAIRPIVFGQRHTENGVEYMIASESVALDVLGFTLIRDLAPGEAVYITEEGKLYTRQCAKAPKYAPCIFEHVYLARPDSIMDGISVYKARLRMGEKLADKILRERPDHDIDVVIPIPDTSRTAALELANRLGVKFREGFVKNRYIGRTFIMPGQAARKKSVRQKLNAIELEFRGKNVMLVDDSIVRGTT 215
BLAST of mRNA_M-pyrifera_M_contig111320.2361.1 vs. uniprot
Match: A0A1T1HEP0_OCELI (Amidophosphoribosyltransferase n=3 Tax=Oceanospirillum TaxID=965 RepID=A0A1T1HEP0_OCELI) HSP 1 Score: 312 bits (800), Expect = 3.940e-102 Identity = 151/197 (76.65%), Postives = 171/197 (86.80%), Query Frame = 1
Query: 1 GIIGLRDPHGIRPIVYGKRETEQGTEYMIASESVAIDVLGFELLGDIAPGEVVFISKAGELQRRQCAPAQEMAPCIFEHVYLARPDSIIDGISVHKARMRMGESLARKIQREWPDHGVDVVIPIPDTSRTAALELAHELGVKYREGFIKNRYIPRTFIMPGQALRRKSVRQKLTAIDLAFEGKNVLLVDDSIVRGTT 591
G++ RDP GIRP V+GKRET+QGTEYM+ASESVA+DVLGFEL+ DIAPGE V+ISK GE+ +QCA PCIFEHVYLARPDSI+DGI +HK+RMRMG+ LA KIQR+ PDHG+DVVIPIPDTSRT+ALELAH LGV +REGFIKNRYI RTFIMPGQ R+KSVRQKL AIDL FEG+NVLLVDDSIVRGTT
Sbjct: 176 GLVAFRDPMGIRPAVFGKRETDQGTEYMVASESVALDVLGFELVRDIAPGEAVYISKQGEIFTQQCADKPSPRPCIFEHVYLARPDSIMDGIHIHKSRMRMGQKLAEKIQRDRPDHGIDVVIPIPDTSRTSALELAHHLGVTFREGFIKNRYIGRTFIMPGQTERKKSVRQKLNAIDLEFEGRNVLLVDDSIVRGTT 372
BLAST of mRNA_M-pyrifera_M_contig111320.2361.1 vs. uniprot
Match: UPI000D955A4D (Amidophosphoribosyltransferase n=2 Tax=Pseudomonas aeruginosa TaxID=287 RepID=UPI000D955A4D) HSP 1 Score: 307 bits (786), Expect = 4.980e-102 Identity = 150/197 (76.14%), Postives = 172/197 (87.31%), Query Frame = 1
Query: 1 GIIGLRDPHGIRPIVYGKRETEQGTEYMIASESVAIDVLGFELLGDIAPGEVVFISKAGELQRRQCAPAQEMAPCIFEHVYLARPDSIIDGISVHKARMRMGESLARKIQREWPDHGVDVVIPIPDTSRTAALELAHELGVKYREGFIKNRYIPRTFIMPGQALRRKSVRQKLTAIDLAFEGKNVLLVDDSIVRGTT 591
GI+G RDP+ IRPIV+G+R TE G EYMIASESVA+DVLGF L+ D+APGE V+I++ G+L RQCA A + APCIFEHVYLARPDSI+DGISV+KAR+RMGE LA KI RE PDH +DVVIPIPDTSRTAALELA+ LGVK+REGF+KNRYI RTFIMPGQA R+KSVRQKL AI+L F GKNV+LVDDSIVRGTT
Sbjct: 90 GIVGFRDPNAIRPIVFGQRHTENGVEYMIASESVALDVLGFTLIRDLAPGEAVYITEEGKLYTRQCAKAPKYAPCIFEHVYLARPDSIMDGISVYKARLRMGEKLADKILRERPDHDIDVVIPIPDTSRTAALELANRLGVKFREGFVKNRYIGRTFIMPGQAARKKSVRQKLNAIELEFRGKNVMLVDDSIVRGTT 286 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig111320.2361.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig111320.2361.1 >prot_M-pyrifera_M_contig111320.2361.1 ID=prot_M-pyrifera_M_contig111320.2361.1|Name=mRNA_M-pyrifera_M_contig111320.2361.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=197bp GIIGLRDPHGIRPIVYGKRETEQGTEYMIASESVAIDVLGFELLGDIAPGback to top mRNA from alignment at M-pyrifera_M_contig111320:1..591- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig111320.2361.1 ID=mRNA_M-pyrifera_M_contig111320.2361.1|Name=mRNA_M-pyrifera_M_contig111320.2361.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=591bp|location=Sequence derived from alignment at M-pyrifera_M_contig111320:1..591- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig111320:1..591- >mRNA_M-pyrifera_M_contig111320.2361.1 ID=mRNA_M-pyrifera_M_contig111320.2361.1|Name=mRNA_M-pyrifera_M_contig111320.2361.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1182bp|location=Sequence derived from alignment at M-pyrifera_M_contig111320:1..591- (Macrocystis pyrifera P11B4 male)back to top |