mRNA_M-pyrifera_M_contig11129.2355.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig11129.2355.1 vs. uniprot
Match: A0A6H5KGN2_9PHAE (P4Hc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGN2_9PHAE) HSP 1 Score: 182 bits (461), Expect = 1.920e-55 Identity = 98/149 (65.77%), Postives = 106/149 (71.14%), Query Frame = 1
Query: 4 GRRKAAACNANIRVYRYAAGQRFGKHVDESVEDEHGNLSQWTVLIYLNGGAA----------------GLSGGDRGSGGSGAEAEVGEETLRGGETVFYKGNYGGKVAASFSPVQGACLVHGHGRQCLLHEGAAVTSGVKYLLRTDVMY 402
G R+ ACN+NIR+YRYA GQRFGKH+DESV+DE+G SQWTVLIYLNG G S G+G E LRGGETVFYKGNYG KVAASFSP QGACLVHGHG+QCLLHEGAAVTSGVKYLLRTDVMY
Sbjct: 87 GGRRPLACNSNIRIYRYAVGQRFGKHIDESVDDENGLTSQWTVLIYLNGXXXXXXXXXXXXXXXXKKKGRSDXXXAFAGAGEEGAP----LRGGETVFYKGNYGDKVAASFSPRQGACLVHGHGQQCLLHEGAAVTSGVKYLLRTDVMY 231
BLAST of mRNA_M-pyrifera_M_contig11129.2355.1 vs. uniprot
Match: A0A836CHZ3_9STRA (Fe2OG dioxygenase domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHZ3_9STRA) HSP 1 Score: 161 bits (407), Expect = 9.380e-48 Identity = 82/132 (62.12%), Postives = 97/132 (73.48%), Query Frame = 1
Query: 10 RKAAACNANIRVYRYAAGQRFGKHVDESVEDEH-GNLSQWTVLIYLNGGAAGLSGGDRGSGGSGAEAEVGEETLRGGETVFYKGNYGGKVAASFSPVQGACLVHGHGRQCLLHEGAAVTSGVKYLLRTDVMY 402
RKAA CNANIR+YRY GQRFGKH+DESV D G S++T+L+YLNG +G+ E L GGET+FYKG+YGGK+AAS +P+ G+CLVHGHG +CLLHEGA VTSGVKYLLRTDVMY
Sbjct: 76 RKAAGCNANIRLYRYCVGQRFGKHIDESVLDPTTGATSEYTLLLYLNG--------------AGSPVRGEEGPLAGGETLFYKGSYGGKLAASVTPIAGSCLVHGHGARCLLHEGALVTSGVKYLLRTDVMY 193
BLAST of mRNA_M-pyrifera_M_contig11129.2355.1 vs. uniprot
Match: A0A7S2UX31_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UX31_9STRA) HSP 1 Score: 147 bits (370), Expect = 7.800e-41 Identity = 75/144 (52.08%), Postives = 98/144 (68.06%), Query Frame = 1
Query: 4 GRRKAAACNANIRVYRYAAGQRFGKHVDESVEDEHGNLSQWTVLIYLNGGAAGLSGGDRGSGGSGAEAEVG-----------EETLRGGETVFYKGNYGGKVAASFSPVQGACLVHGHGRQCLLHEGAAVTSGVKYLLRTDVMY 402
G ++A+ C+ NIR+Y+Y GQRFGKH+D S D+HG S +TVL+YL+GG D+G E G +E L+GG TVFY+G+YG KVAAS +P+QG+CL+HGHG +CL+HEGA V GVKY+LRTDVMY
Sbjct: 167 GGKEASGCSNNIRLYKYVPGQRFGKHIDGSNVDQHGRQSYYTVLVYLSGGE------DQGRPSPAEEEAKGGAPLDGLEESLQEPLQGGHTVFYRGSYGDKVAASVAPLQGSCLLHGHGDRCLVHEGAEVKRGVKYVLRTDVMY 304
BLAST of mRNA_M-pyrifera_M_contig11129.2355.1 vs. uniprot
Match: D7FQ80_ECTSI (P4Hc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ80_ECTSI) HSP 1 Score: 147 bits (370), Expect = 1.910e-40 Identity = 98/227 (43.17%), Postives = 106/227 (46.70%), Query Frame = 1
Query: 4 GRRKAAACNANIRVYRYAAGQRFGKHVDESVEDEHGNLSQWTVLIYLNGGAA-----------------GLSGGDRGSGGSGAEAEVGEETLRGGETVFYK-----------------------------------------------------------------------------GNYGGKVAASFSPVQGACLVHGHGRQCLLHEGAAVTSGVKYLLRTDVMY 402
G R+ ACN+NIR+YRYA GQRFGKH+DESV+DE+G SQWTVLIYLNG G S G+G E LRGGETVFYK GNYG KVAASFSP QGACLVHGHG+QCLLHEGAAVTSGVKYLLRTDVMY
Sbjct: 123 GGRRPLACNSNIRIYRYAVGQRFGKHIDESVDDENGLTSQWTVLIYLNGXXXXXXXXXXXXXXXXSKKKGRSDXXXTFAGAGEEGAP----LRGGETVFYKAAADALCCVPLFPIGTRGFKQILEESVSVHSPTLPLTQVPCSLFPTCVLLPLNPSPLSAVLRALTFGSLSSCLLPFKGNYGDKVAASFSPRQGACLVHGHGQQCLLHEGAAVTSGVKYLLRTDVMY 345
BLAST of mRNA_M-pyrifera_M_contig11129.2355.1 vs. uniprot
Match: A0A7S2Z9G1_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2Z9G1_9RHOD) HSP 1 Score: 138 bits (347), Expect = 4.640e-39 Identity = 69/128 (53.91%), Postives = 85/128 (66.41%), Query Frame = 1
Query: 19 AACNANIRVYRYAAGQRFGKHVDESVEDEHGNLSQWTVLIYLNGGAAGLSGGDRGSGGSGAEAEVGEETLRGGETVFYKGNYGGKVAASFSPVQGACLVHGHGRQCLLHEGAAVTSGVKYLLRTDVMY 402
A C++NIR+YRY GQRFGKHVDES + E+G S +T+LIYLN E LRGGETVFYKGNYG K+A S++P G+ L+HGHG +C++HEG AV G KY+LRTDVMY
Sbjct: 54 AGCSSNIRLYRYIEGQRFGKHVDESHDGENGERSVFTLLIYLN-----------------------HEGLRGGETVFYKGNYGDKLALSYAPRAGSLLLHGHGSRCMVHEGKAVIEGQKYVLRTDVMY 158
BLAST of mRNA_M-pyrifera_M_contig11129.2355.1 vs. uniprot
Match: A0A7S2ZAS2_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZAS2_9RHOD) HSP 1 Score: 138 bits (347), Expect = 6.660e-38 Identity = 69/128 (53.91%), Postives = 85/128 (66.41%), Query Frame = 1
Query: 19 AACNANIRVYRYAAGQRFGKHVDESVEDEHGNLSQWTVLIYLNGGAAGLSGGDRGSGGSGAEAEVGEETLRGGETVFYKGNYGGKVAASFSPVQGACLVHGHGRQCLLHEGAAVTSGVKYLLRTDVMY 402
A C++NIR+YRY GQRFGKHVDES + E+G S +T+LIYLN E LRGGETVFYKGNYG K+A S++P G+ L+HGHG +C++HEG AV G KY+LRTDVMY
Sbjct: 150 AGCSSNIRLYRYIEGQRFGKHVDESHDGENGERSVFTLLIYLN-----------------------HEGLRGGETVFYKGNYGDKLALSYAPRAGSLLLHGHGSRCMVHEGKAVIEGQKYVLRTDVMY 254
BLAST of mRNA_M-pyrifera_M_contig11129.2355.1 vs. uniprot
Match: A0A0L0G5Z2_9EUKA (Fe2OG dioxygenase domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0G5Z2_9EUKA) HSP 1 Score: 136 bits (342), Expect = 3.390e-37 Identity = 71/135 (52.59%), Postives = 91/135 (67.41%), Query Frame = 1
Query: 1 HGRRKAAACNANIRVYRYAAGQRFGKHVDESVEDEHGNLSQWTVLIYLNGGAAGLSGGDRGSGGSGAEAEVGEETLRGGETVFYKGNYGGKVAASFSPVQGACLVHGHGRQCLLHEGAAVTSGVKYLLRTDVMYS 405
+G R+ +CN NIR+Y+Y GQRFG+HVDESV D +G S +TVL+YLNG + + G GA+ E TL GGET FY+ ++G +A + P +G L+HGHG QCL HEGA V GVKYLLRTDVMY+
Sbjct: 123 YGTRQLNSCNTNIRLYKYGPGQRFGRHVDESVVDSNGRKSVYTVLVYLNGHNEDNTS-ETPRSGDGADLEA-INTLVGGETKFYRRHHGSAIACAVRPKKGQALLHGHGAQCLTHEGAEVKEGVKYLLRTDVMYA 255
BLAST of mRNA_M-pyrifera_M_contig11129.2355.1 vs. uniprot
Match: A0A6T9P3C4_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A6T9P3C4_9EUKA) HSP 1 Score: 124 bits (312), Expect = 3.690e-33 Identity = 64/134 (47.76%), Postives = 80/134 (59.70%), Query Frame = 1
Query: 4 GRRKAAACNANIRVYRYAAGQRFGKHVDESVEDEHGNLSQWTVLIYLNGGAAGLSGGDRGSGGSGAEAEVGEETLRGGETVFYKGNYGGKVAASFSPVQGACLVHGHGRQCLLHEGAAVTSGVKYLLRTDVMYS 405
GR + + CNANIR+Y+Y GQRFG+HVD+S G+ +++TVL+YLN E RGGETVFY ++ A FSP GA LVH HG +CL HEG+ VT GVKYLLRTD+ YS
Sbjct: 103 GRLRPSGCNANIRLYKYGQGQRFGRHVDQSNRLSDGSSTEFTVLLYLN------------------------EGFRGGETVFYTSHFAATEAYRFSPSAGAVLVHAHGERCLTHEGSEVTQGVKYLLRTDLAYS 212
BLAST of mRNA_M-pyrifera_M_contig11129.2355.1 vs. uniprot
Match: A0A812Q5H6_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812Q5H6_9DINO) HSP 1 Score: 123 bits (308), Expect = 5.860e-32 Identity = 64/132 (48.48%), Postives = 83/132 (62.88%), Query Frame = 1
Query: 10 RKAAACNANIRVYRYAAGQRFGKHVDESVED-EHGNLSQWTVLIYLNGGAAGLSGGDRGSGGSGAEAEVGEETLRGGETVFYKGNYGGKVAASFSPVQGACLVHGHGRQCLLHEGAAVTSGVKYLLRTDVMY 402
R A C+ IRVYRY GQRFG+HVD S ++ E G + +TVL+YLNGG E + + +RGGETVF+K + G + A +F P +G CL HGHG +C+ HEGA V GVKY+LRTDV+Y
Sbjct: 150 RAALGCSPRIRVYRYVKGQRFGQHVDGSRDEPEMGGRTHFTVLVYLNGG----------------ERDPKDLQVRGGETVFWKDHDGKRPALAFPPTRGVCLFHGHGDECMTHEGAGVEEGVKYVLRTDVVY 265
BLAST of mRNA_M-pyrifera_M_contig11129.2355.1 vs. uniprot
Match: A0A813GA74_POLGL (Hypothetical protein n=3 Tax=Polarella glacialis TaxID=89957 RepID=A0A813GA74_POLGL) HSP 1 Score: 123 bits (308), Expect = 6.130e-32 Identity = 66/132 (50.00%), Postives = 81/132 (61.36%), Query Frame = 1
Query: 10 RKAAACNANIRVYRYAAGQRFGKHVDESVEDEH-GNLSQWTVLIYLNGGAAGLSGGDRGSGGSGAEAEVGEETLRGGETVFYKGNYGGKVAASFSPVQGACLVHGHGRQCLLHEGAAVTSGVKYLLRTDVMY 402
RKA C+ IRVYRY GQRFG+HVD S E+ G + +TVLIYLNGG + E + ++GGETVF+K + G K A F P +G CL HGHG C+ HEGA V GVKY+LRTDV+Y
Sbjct: 152 RKALGCSPRIRVYRYTRGQRFGQHVDGSREEPSMGGSTHFTVLIYLNGG----------------DREEKDLQVKGGETVFWKDHDGKKPALVFPPTRGVCLFHGHGDDCMTHEGAGVEDGVKYVLRTDVVY 267 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11129.2355.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig11129.2355.1 >prot_M-pyrifera_M_contig11129.2355.1 ID=prot_M-pyrifera_M_contig11129.2355.1|Name=mRNA_M-pyrifera_M_contig11129.2355.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=136bp HGRRKAAACNANIRVYRYAAGQRFGKHVDESVEDEHGNLSQWTVLIYLNGback to top mRNA from alignment at M-pyrifera_M_contig11129:2337..3446+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig11129.2355.1 ID=mRNA_M-pyrifera_M_contig11129.2355.1|Name=mRNA_M-pyrifera_M_contig11129.2355.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1110bp|location=Sequence derived from alignment at M-pyrifera_M_contig11129:2337..3446+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig11129:2337..3446+ >mRNA_M-pyrifera_M_contig11129.2355.1 ID=mRNA_M-pyrifera_M_contig11129.2355.1|Name=mRNA_M-pyrifera_M_contig11129.2355.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=816bp|location=Sequence derived from alignment at M-pyrifera_M_contig11129:2337..3446+ (Macrocystis pyrifera P11B4 male)back to top |