mRNA_M-pyrifera_M_contig11124.2350.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig11124.2350.1 vs. uniprot
Match: D7G2K4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2K4_ECTSI) HSP 1 Score: 71.6 bits (174), Expect = 9.530e-14 Identity = 53/100 (53.00%), Postives = 61/100 (61.00%), Query Frame = 1
Query: 25 TNAQGKPVLVINHHKLEGKVATEPKPLLVLRKVVVPGTSGGXXXXXXXXATAGDGNGNGVTEASTVRGG-----VEYHVVGKVTRKTIFKTRPKPLIRKI 309
T+ GK +LVI++HKLEGK A+EPKPLLVLRKVVV XXXXXX VEY VVG+V RKTIFKTRPKPLI+K+
Sbjct: 23 TSENGKAMLVISNHKLEGKAASEPKPLLVLRKVVVDVNDENCGXXXXXXXXXXXXXXXXXXXXXXXXXXPPAQRVEYRVVGRVARKTIFKTRPKPLIKKL 122
BLAST of mRNA_M-pyrifera_M_contig11124.2350.1 vs. uniprot
Match: B7P0M0_IXOSC (Uncharacterized protein (Fragment) n=2 Tax=Ixodes TaxID=6944 RepID=B7P0M0_IXOSC) HSP 1 Score: 56.6 bits (135), Expect = 4.310e-8 Identity = 35/93 (37.63%), Postives = 44/93 (47.31%), Query Frame = 1
Query: 22 HTNAQGKPVLVINHHKLEGKVATEPKPLLVLRKVVVPGTSGGXXXXXXXXATAGDGNGNGVTEASTVRGGVEYHVVGKVTRKTIFKTRPKPLI 300
H G PVL++ HH L GK KP LV+RKV+ S G T T R EYHV G VT+K +F+ RPKP++
Sbjct: 42 HYTKAGVPVLLVGHHVLYGKEQKVEKPFLVMRKVMQESASNG-------------------TSKHTAR---EYHVEGVVTKKLVFRARPKPIV 112
BLAST of mRNA_M-pyrifera_M_contig11124.2350.1 vs. uniprot
Match: A0A0K8RNW6_IXORI (Uncharacterized protein (Fragment) n=2 Tax=Ixodes ricinus TaxID=34613 RepID=A0A0K8RNW6_IXORI) HSP 1 Score: 57.4 bits (137), Expect = 7.700e-8 Identity = 36/93 (38.71%), Postives = 43/93 (46.24%), Query Frame = 1
Query: 22 HTNAQGKPVLVINHHKLEGKVATEPKPLLVLRKVVVPGTSGGXXXXXXXXATAGDGNGNGVTEASTVRGGVEYHVVGKVTRKTIFKTRPKPLI 300
H G PVL++ HH L GK KP LV+RKV S G T T R EYHV G VTRK +F+ RPKP++
Sbjct: 115 HYTKAGVPVLLVGHHVLYGKEQEVEKPFLVMRKVTQESASNG-------------------TSKHTAR---EYHVEGVVTRKLVFRARPKPIV 185
BLAST of mRNA_M-pyrifera_M_contig11124.2350.1 vs. uniprot
Match: A0A6P7WK94_IXOSC (uncharacterized protein LOC8023099 isoform X1 n=3 Tax=Ixodes scapularis TaxID=6945 RepID=A0A6P7WK94_IXOSC) HSP 1 Score: 56.6 bits (135), Expect = 3.680e-7 Identity = 35/93 (37.63%), Postives = 44/93 (47.31%), Query Frame = 1
Query: 22 HTNAQGKPVLVINHHKLEGKVATEPKPLLVLRKVVVPGTSGGXXXXXXXXATAGDGNGNGVTEASTVRGGVEYHVVGKVTRKTIFKTRPKPLI 300
H G PVL++ HH L GK KP LV+RKV+ S G T T R EYHV G VT+K +F+ RPKP++
Sbjct: 271 HYTKAGVPVLLVGHHVLYGKEQKVEKPFLVMRKVMQESASNG-------------------TSKHTAR---EYHVEGVVTKKLVFRARPKPIV 341
BLAST of mRNA_M-pyrifera_M_contig11124.2350.1 vs. uniprot
Match: A0A5N5T9K4_9CRUS (Chromosome transmission fidelity protein 8-like protein n=1 Tax=Armadillidium nasatum TaxID=96803 RepID=A0A5N5T9K4_9CRUS) HSP 1 Score: 51.2 bits (121), Expect = 4.640e-6 Identity = 33/89 (37.08%), Postives = 42/89 (47.19%), Query Frame = 1
Query: 34 QGKPVLVINHHKLEGKVATEPKPLLVLRKVVVPGTSGGXXXXXXXXATAGDGNGNGVTEASTVRGGVEYHVVGKVTRKTIFKTRPKPLI 300
+G PVL+I HH L GKV KP +V+RK+V S V+Y+V VT+K IFKTRPKP+I
Sbjct: 47 KGVPVLIIGHHILFGKVVEMNKPFIVIRKLV----------------------------ESQTENQVDYNVEAVVTKKLIFKTRPKPII 107
BLAST of mRNA_M-pyrifera_M_contig11124.2350.1 vs. uniprot
Match: A0A8D8M5Z0_9HEMI (Chromosome transmission fidelity protein 8 homolog n=3 Tax=Cacopsylla melanoneura TaxID=428564 RepID=A0A8D8M5Z0_9HEMI) HSP 1 Score: 50.1 bits (118), Expect = 1.910e-5 Identity = 33/95 (34.74%), Postives = 46/95 (48.42%), Query Frame = 1
Query: 22 HTNAQGKPVLVINHHKLEGKVATEPKPLLVLRKVVVPGTSGGXXXXXXXXATAGDGNGNGVTEASTVRG--GVEYHVVGKVTRKTIFKTRPKPLI 300
H G P+L+I HH L GKV PL V++K+ T D NG + + + VEY ++ +TRK IFKTRPKP++
Sbjct: 44 HFQKNGTPILIIGHHILHGKVQKLETPLAVMKKI-----------DSNSDITDTDLNGIDFLDQNDSKDTKNVEYEILVVITRKMIFKTRPKPIV 127 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11124.2350.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig11124.2350.1 >prot_M-pyrifera_M_contig11124.2350.1 ID=prot_M-pyrifera_M_contig11124.2350.1|Name=mRNA_M-pyrifera_M_contig11124.2350.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=103bp MPLLPRTHTNAQGKPVLVINHHKLEGKVATEPKPLLVLRKVVVPGTSGGGback to top mRNA from alignment at M-pyrifera_M_contig11124:8670..8978- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig11124.2350.1 ID=mRNA_M-pyrifera_M_contig11124.2350.1|Name=mRNA_M-pyrifera_M_contig11124.2350.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=309bp|location=Sequence derived from alignment at M-pyrifera_M_contig11124:8670..8978- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig11124:8670..8978- >mRNA_M-pyrifera_M_contig11124.2350.1 ID=mRNA_M-pyrifera_M_contig11124.2350.1|Name=mRNA_M-pyrifera_M_contig11124.2350.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=618bp|location=Sequence derived from alignment at M-pyrifera_M_contig11124:8670..8978- (Macrocystis pyrifera P11B4 male)back to top |