mRNA_M-pyrifera_M_contig111238.2349.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig111238.2349.1 vs. uniprot
Match: A0A6H5KYE2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYE2_9PHAE) HSP 1 Score: 229 bits (584), Expect = 1.690e-72 Identity = 108/172 (62.79%), Postives = 134/172 (77.91%), Query Frame = 1
Query: 1 RVRRKMVTAVACNPRYGDLFAVGYGSYDFMRQTSGLISVFSLKNVSTPEFSFSLESGVMCLDWHPENPALIAVGCYDGTVRVFDVRRRENRPVYSADVRSGKHTDPVWSVLWQRDDSGADYTFFSVSSDGRVGSWILSKNELQMETIMTLKLVASGDGGGEGGSLAGLAGGC 516
R +RK VTA+A NP+Y DLFA YGSYDFMRQ SG++ FSLKN S PE++F ESGVMCLD+HP + +L+AVGC+DGTV VFDVR + NRP+YS+ +++GKHTDPVW V WQ DD + FFS+SSDGRV SW++SKNEL+ME +M LKLV + E SL+GLAGGC
Sbjct: 79 RTKRKQVTALAWNPQYPDLFAAAYGSYDFMRQGSGMVCCFSLKNTSHPEYTFGTESGVMCLDFHPVHNSLLAVGCHDGTVMVFDVRHKANRPIYSSSIKTGKHTDPVWQVYWQSDDQPKELNFFSISSDGRVASWVMSKNELKMEPVMQLKLVNTIKDDPEETSLSGLAGGC 250
BLAST of mRNA_M-pyrifera_M_contig111238.2349.1 vs. uniprot
Match: A0A0P1A504_PLAHL (Dynein intermediate chain 2 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A504_PLAHL) HSP 1 Score: 231 bits (588), Expect = 4.560e-70 Identity = 105/172 (61.05%), Postives = 137/172 (79.65%), Query Frame = 1
Query: 1 RVRRKMVTAVACNPRYGDLFAVGYGSYDFMRQTSGLISVFSLKNVSTPEFSFSLESGVMCLDWHPENPALIAVGCYDGTVRVFDVRRRENRPVYSADVRSGKHTDPVWSVLWQRDDSGADYTFFSVSSDGRVGSWILSKNELQMETIMTLKLVASGDGGGEGGSLAGLAGGC 516
R +++ VTAV NPR+GDLFAVG+GSYDF++Q SG++ FSLKN S PE++F ESGVMCLD+HP++ AL+AVGCYDGTV V+DVR + NRP+Y A +++GKH DPVW V+WQ +D + F+S+SSDGRV +WILSKNEL+ME +M LKLVA+ E S++GLAGGC
Sbjct: 360 RAKKRQVTAVCWNPRFGDLFAVGFGSYDFLKQDSGVLCCFSLKNASHPEYTFITESGVMCLDFHPQHAALLAVGCYDGTVLVYDVRSKTNRPIYVATIKTGKHMDPVWQVIWQEEDLAKELNFYSISSDGRVANWILSKNELKMEPVMQLKLVAAAKDDPEDASISGLAGGC 531
BLAST of mRNA_M-pyrifera_M_contig111238.2349.1 vs. uniprot
Match: H3H1T8_PHYRM (Uncharacterized protein n=18 Tax=Phytophthora TaxID=4783 RepID=H3H1T8_PHYRM) HSP 1 Score: 234 bits (596), Expect = 7.970e-70 Identity = 108/172 (62.79%), Postives = 138/172 (80.23%), Query Frame = 1
Query: 1 RVRRKMVTAVACNPRYGDLFAVGYGSYDFMRQTSGLISVFSLKNVSTPEFSFSLESGVMCLDWHPENPALIAVGCYDGTVRVFDVRRRENRPVYSADVRSGKHTDPVWSVLWQRDDSGADYTFFSVSSDGRVGSWILSKNELQMETIMTLKLVASGDGGGEGGSLAGLAGGC 516
R ++K VTAV NPR+GDLFA+G+GSYDF++Q SG+I +SLKN S PEF+F+ ESGVMCLD+HP++ AL+AVGCYDGTV V+DVR + NRP+Y A +++GKHTDPVW V WQ +D + F+S+SSDGRV +WILSKNEL+ME +M LKLVA+ E SL+GLAGGC
Sbjct: 361 RAKKKQVTAVCWNPRFGDLFAIGFGSYDFLKQGSGVICCYSLKNASHPEFTFTTESGVMCLDFHPQHAALLAVGCYDGTVLVYDVRSKTNRPIYVATIKTGKHTDPVWQVNWQEEDLAKELNFYSISSDGRVANWILSKNELKMEPVMQLKLVAAAKDDPEEASLSGLAGGC 532
BLAST of mRNA_M-pyrifera_M_contig111238.2349.1 vs. uniprot
Match: A0A662YEF1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YEF1_9STRA) HSP 1 Score: 228 bits (580), Expect = 2.020e-69 Identity = 105/172 (61.05%), Postives = 137/172 (79.65%), Query Frame = 1
Query: 1 RVRRKMVTAVACNPRYGDLFAVGYGSYDFMRQTSGLISVFSLKNVSTPEFSFSLESGVMCLDWHPENPALIAVGCYDGTVRVFDVRRRENRPVYSADVRSGKHTDPVWSVLWQRDDSGADYTFFSVSSDGRVGSWILSKNELQMETIMTLKLVASGDGGGEGGSLAGLAGGC 516
R ++K VTAV NPR+GDLFA+G+GSYDF++Q SG++ +SLKN S PEF+F+ ESGVMCLD+HP++ AL+AVGCYDGTV V+DVR + +R +Y A +++GKHTDPVW V WQ +D + F+S+SSDGRV +WILSKNEL+ME +M LKLVA+ E SL+GLAGGC
Sbjct: 298 RAKKKQVTAVCWNPRFGDLFALGFGSYDFLKQGSGVVCCYSLKNASHPEFTFTTESGVMCLDFHPQHAALLAVGCYDGTVLVYDVRSKTSRAIYVATIKTGKHTDPVWQVNWQEEDLAKELNFYSISSDGRVANWILSKNELKMEPVMQLKLVAAAKDDPEEASLSGLAGGC 469
BLAST of mRNA_M-pyrifera_M_contig111238.2349.1 vs. uniprot
Match: A0A2D4BVK3_PYTIN (Dynein intermediate chain 2 n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BVK3_PYTIN) HSP 1 Score: 232 bits (592), Expect = 2.810e-69 Identity = 105/172 (61.05%), Postives = 138/172 (80.23%), Query Frame = 1
Query: 1 RVRRKMVTAVACNPRYGDLFAVGYGSYDFMRQTSGLISVFSLKNVSTPEFSFSLESGVMCLDWHPENPALIAVGCYDGTVRVFDVRRRENRPVYSADVRSGKHTDPVWSVLWQRDDSGADYTFFSVSSDGRVGSWILSKNELQMETIMTLKLVASGDGGGEGGSLAGLAGGC 516
R ++K VTA+ NPR+ DLFAVGYGSYDF++Q SG++ +SLKN S PEF+F+ ESGVMCLD+HP++PAL+AVGCYDGTV V+DVR + NRP+Y++ +++GKHTDPVW V WQ +D + F+S+SSDGRV +WI+SKNEL+ME +M LK+VA+ E SL GLAGGC
Sbjct: 338 RAKKKQVTAMCWNPRFADLFAVGYGSYDFLKQGSGVVCCYSLKNSSHPEFTFTTESGVMCLDFHPQHPALLAVGCYDGTVIVYDVRNKANRPIYTSTIKTGKHTDPVWQVNWQEEDLAKELNFYSISSDGRVANWIMSKNELKMEPVMQLKIVATAKDDPEESSLTGLAGGC 509
BLAST of mRNA_M-pyrifera_M_contig111238.2349.1 vs. uniprot
Match: D7FZ08_ECTSI (Putative, Dynein intermediate chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ08_ECTSI) HSP 1 Score: 229 bits (584), Expect = 5.560e-69 Identity = 108/172 (62.79%), Postives = 134/172 (77.91%), Query Frame = 1
Query: 1 RVRRKMVTAVACNPRYGDLFAVGYGSYDFMRQTSGLISVFSLKNVSTPEFSFSLESGVMCLDWHPENPALIAVGCYDGTVRVFDVRRRENRPVYSADVRSGKHTDPVWSVLWQRDDSGADYTFFSVSSDGRVGSWILSKNELQMETIMTLKLVASGDGGGEGGSLAGLAGGC 516
R +RK VTA+A NP+Y DLFA YGSYDFMRQ SG++ FSLKN S PE++F ESGVMCLD+HP + +L+AVGC+DGTV VFDVR + NRP+YS+ +++GKHTDPVW V WQ DD + FFS+SSDGRV SW++SKNEL+ME +M LKLV + E SL+GLAGGC
Sbjct: 257 RTKRKQVTALAWNPQYPDLFAAAYGSYDFMRQGSGMVCCFSLKNTSHPEYTFGTESGVMCLDFHPVHNSLLAVGCHDGTVMVFDVRHKANRPIYSSSIKTGKHTDPVWQVYWQSDDQPKELNFFSISSDGRVASWVMSKNELKMEPVMQLKLVNTIKDDPEETSLSGLAGGC 428
BLAST of mRNA_M-pyrifera_M_contig111238.2349.1 vs. uniprot
Match: A0A7S1GAR4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GAR4_9STRA) HSP 1 Score: 231 bits (588), Expect = 6.140e-69 Identity = 112/172 (65.12%), Postives = 139/172 (80.81%), Query Frame = 1
Query: 1 RVRRKMVTAVACNPRYGDLFAVGYGSYDFMRQTSGLISVFSLKNVSTPEFSFSLESGVMCLDWHPENPALIAVGCYDGTVRVFDVRRRENRPVYSADVRSGKHTDPVWSVLWQRDDSGADYTFFSVSSDGRVGSWILSKNELQMETIMTLKLV-ASGDGGGEGGSLAGLAGG 513
R RRK VTA+A NP + DLFAVGYG+YDFM+Q SGLI V+SLKN S PEF F+ +SGVMCLD+HP++ AL+AVGCYDGTV+VFDVR++EN ++ +D+++GKHTDPVW V WQ +D D FFSVSSDGRV +WI+SKNEL+MET+M LKLV +S + E SL GLAGG
Sbjct: 313 RTRRKQVTALAWNPAFPDLFAVGYGTYDFMKQGSGLICVYSLKNTSHPEFMFTTDSGVMCLDFHPQHHALLAVGCYDGTVKVFDVRKKENTHIFVSDIKTGKHTDPVWQVSWQEEDLAKDLNFFSVSSDGRVANWIMSKNELKMETVMLLKLVNSSAEEPDEETSLTGLAGG 484
BLAST of mRNA_M-pyrifera_M_contig111238.2349.1 vs. uniprot
Match: K3X8Q8_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3X8Q8_GLOUD) HSP 1 Score: 230 bits (587), Expect = 1.010e-68 Identity = 104/172 (60.47%), Postives = 138/172 (80.23%), Query Frame = 1
Query: 1 RVRRKMVTAVACNPRYGDLFAVGYGSYDFMRQTSGLISVFSLKNVSTPEFSFSLESGVMCLDWHPENPALIAVGCYDGTVRVFDVRRRENRPVYSADVRSGKHTDPVWSVLWQRDDSGADYTFFSVSSDGRVGSWILSKNELQMETIMTLKLVASGDGGGEGGSLAGLAGGC 516
R ++K VTAV NPR+ DLFA+GYGSYDF++Q SG++ FSLKN S PEF+F+ ESGVMCLD+HP++ AL+AVGCYDGTV V+DVR + NRP+Y++ +++GKHTDPVW V WQ +D + F+S+SSDGRV +WI+SKNEL+ME +M LK+V++ E SL+GLAGGC
Sbjct: 339 RAKKKQVTAVCWNPRFADLFAIGYGSYDFLKQGSGVVCCFSLKNSSHPEFTFTTESGVMCLDFHPQHAALLAVGCYDGTVIVYDVRNKANRPIYTSTIKTGKHTDPVWQVNWQEEDLAKELNFYSISSDGRVANWIMSKNELKMEPVMQLKIVSTAKDDPEESSLSGLAGGC 510
BLAST of mRNA_M-pyrifera_M_contig111238.2349.1 vs. uniprot
Match: A0A6G0WMF5_9STRA (Uncharacterized protein n=8 Tax=Aphanomyces TaxID=100860 RepID=A0A6G0WMF5_9STRA) HSP 1 Score: 229 bits (585), Expect = 1.100e-68 Identity = 106/172 (61.63%), Postives = 136/172 (79.07%), Query Frame = 1
Query: 1 RVRRKMVTAVACNPRYGDLFAVGYGSYDFMRQTSGLISVFSLKNVSTPEFSFSLESGVMCLDWHPENPALIAVGCYDGTVRVFDVRRRENRPVYSADVRSGKHTDPVWSVLWQRDDSGADYTFFSVSSDGRVGSWILSKNELQMETIMTLKLVASGDGGGEGGSLAGLAGGC 516
R ++K VTAV NP + DLFAVGYGSYDF++Q +GL+ +SLKN S PEF F+ ESGVMCLD+HP+ PAL+AVGCYDGTV V+DVR + NRP+Y++ +++GKHTDPVW V WQ +D + FFS+SSDGRV +WI+SKNEL+ME +M LKLV++ E SL+GLAGGC
Sbjct: 317 RAKKKQVTAVCWNPCFSDLFAVGYGSYDFLKQGAGLVCCYSLKNTSHPEFIFATESGVMCLDFHPQQPALLAVGCYDGTVMVYDVRNKANRPIYTSTIKTGKHTDPVWQVNWQEEDLAKELNFFSISSDGRVANWIMSKNELKMEPVMQLKLVSTVKDDPEETSLSGLAGGC 488
BLAST of mRNA_M-pyrifera_M_contig111238.2349.1 vs. uniprot
Match: A0A7S1CJE3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CJE3_9STRA) HSP 1 Score: 229 bits (584), Expect = 2.430e-68 Identity = 111/172 (64.53%), Postives = 138/172 (80.23%), Query Frame = 1
Query: 1 RVRRKMVTAVACNPRYGDLFAVGYGSYDFMRQTSGLISVFSLKNVSTPEFSFSLESGVMCLDWHPENPALIAVGCYDGTVRVFDVRRRENRPVYSADVRSGKHTDPVWSVLWQRDDSGADYTFFSVSSDGRVGSWILSKNELQMETIMTLKLV-ASGDGGGEGGSLAGLAGG 513
RV+RKMVT +A NP Y DL AV YG+YDFM+Q SGLI V+SLKN S PEF F+ +SGVMCLD+HP++ AL+AVGCYDGTV+VFDVR++EN ++ +D+++GKHTDPVW V WQ +D D FFSVSSDGRV +WI+SKNEL+MET+M LKLV +S + E SL GLAGG
Sbjct: 315 RVKRKMVTGIAWNPVYADLLAVSYGNYDFMKQGSGLICVYSLKNTSHPEFMFTTDSGVMCLDFHPQHHALLAVGCYDGTVKVFDVRKKENTHIFVSDIKTGKHTDPVWQVSWQEEDLAKDLNFFSVSSDGRVANWIMSKNELKMETVMLLKLVNSSAEEPDEETSLTGLAGG 486 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig111238.2349.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig111238.2349.1 >prot_M-pyrifera_M_contig111238.2349.1 ID=prot_M-pyrifera_M_contig111238.2349.1|Name=mRNA_M-pyrifera_M_contig111238.2349.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=167bp MVTAVACNPRYGDLFAVGYGSYDFMRQTSGLISVFSLKNVSTPEFSFSLEback to top mRNA from alignment at M-pyrifera_M_contig111238:5..592+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig111238.2349.1 ID=mRNA_M-pyrifera_M_contig111238.2349.1|Name=mRNA_M-pyrifera_M_contig111238.2349.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=588bp|location=Sequence derived from alignment at M-pyrifera_M_contig111238:5..592+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig111238:5..592+ >mRNA_M-pyrifera_M_contig111238.2349.1 ID=mRNA_M-pyrifera_M_contig111238.2349.1|Name=mRNA_M-pyrifera_M_contig111238.2349.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1002bp|location=Sequence derived from alignment at M-pyrifera_M_contig111238:5..592+ (Macrocystis pyrifera P11B4 male)back to top |