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Homology
BLAST of mRNA_M-pyrifera_M_contig1112.2337.1 vs. uniprot
Match: D8LTD7_ECTSI (Flagellar associated protein, quinone reductase-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTD7_ECTSI) HSP 1 Score: 315 bits (808), Expect = 1.400e-99 Identity = 152/197 (77.16%), Postives = 170/197 (86.29%), Query Frame = 1
Query: 1 SLYGHIDAMAKEIKAGIEEAGCECVMLRCPETLPQEVLEKMHAPPKDETIPVVNVADLSNADGILFGMPTRFGMACAQMKAVLDATGSLWQRGSLVGKPGGCFFSTASQASGQETTALTFVTQLVHHGMIYVPIGYSSPLLFNNDEVHGGSPHGAGTIAGSDGSRMPSDLEKELAKHQGSLFANTCKALKVGRAATA 591
SLYGH++ +A EIK GIEEAGCE VM+RCPETLP ++LEKMHAPPKDE+IP V+V DL NADGILFG PTRFG QMK+VLDATG LWQ G LVGKP G F STA+Q GQET+ALTF+TQL HHGM++VPIGYSSPLLFNNDEVHGGSP+GAGT+AG DGSRMPSDLEK +AKHQGS FA TCKALK GRAA+A
Sbjct: 15 SLYGHVNTLAAEIKTGIEEAGCEAVMVRCPETLPADILEKMHAPPKDESIPEVDVKDLVNADGILFGFPTRFGTLPTQMKSVLDATGGLWQSGGLVGKPAGVFISTATQGGGQETSALTFLTQLAHHGMMFVPIGYSSPLLFNNDEVHGGSPYGAGTLAGGDGSRMPSDLEKGVAKHQGSFFAGTCKALKAGRAASA 211
BLAST of mRNA_M-pyrifera_M_contig1112.2337.1 vs. uniprot
Match: A0A835YJD4_9STRA (Flagellar associated protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJD4_9STRA) HSP 1 Score: 264 bits (675), Expect = 4.490e-80 Identity = 126/194 (64.95%), Postives = 152/194 (78.35%), Query Frame = 1
Query: 1 SLYGHIDAMAKEIKAGIEEAGCECVMLRCPETLPQEVLEKMHAPPKDETIPVVNVADLSNADGILFGMPTRFGMACAQMKAVLDATGSLWQRGSLVGKPGGCFFSTASQASGQETTALTFVTQLVHHGMIYVPIGYSSPLLFNNDEVHGGSPHGAGTIAGSDGSRMPSDLEKELAKHQGSLFANTCKALKVGRA 582
SLYGHI MAK + G+E GCE V+ R PE L E+ EKMHAPP+DE+IP+ NV DL ADG +FG+ TRFGM+ AQMK++ D+TGSLWQ G+L GKP G F ST +Q GQETTALT+VTQL HHGMI+VP+GY++PLLFN DEVHGGSP+GAGT AG DGSR P+ LEK++AKHQG+ FA ALK G+A
Sbjct: 11 SLYGHIATMAKSVVEGLEAGGCEVVLCRAPELLSDEIREKMHAPPQDESIPICNVKDLPEADGFIFGIATRFGMSNAQMKSLWDSTGSLWQAGALAGKPAGIFVSTGTQGGGQETTALTWVTQLTHHGMIFVPLGYTTPLLFNMDEVHGGSPYGAGTFAGPDGSRQPTQLEKDVAKHQGTYFAGVVTALKNGKA 204
BLAST of mRNA_M-pyrifera_M_contig1112.2337.1 vs. uniprot
Match: A0A835YWM1_9STRA (Flagellar associated protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWM1_9STRA) HSP 1 Score: 261 bits (667), Expect = 7.890e-79 Identity = 122/194 (62.89%), Postives = 157/194 (80.93%), Query Frame = 1
Query: 1 SLYGHIDAMAKEIKAGIEEAGCECVMLRCPETLPQEVLEKMHAPPKDETIPVVNVADLSNADGILFGMPTRFGMACAQMKAVLDATGSLWQRGSLVGKPGGCFFSTASQASGQETTALTFVTQLVHHGMIYVPIGYSSPLLFNNDEVHGGSPHGAGTIAGSDGSRMPSDLEKELAKHQGSLFANTCKALKVGRA 582
SLYGHI A+A+EI+AG++E GC+ V+ R PE L E+LEKMHAPP DE+IP+ VADL+ ADGI+FG+ TRFGMA AQ+K++ D+TG +WQ G+LVGKP G F STA+Q GQET A+T+++QL HHGMI+VP+GY++PLLF DE+ GGSP+GAGT AG+DGSRMPS LEK++A+HQG FA AL+ G A
Sbjct: 11 SLYGHITAVAREIEAGLKEGGCDVVICRAPELLSAEILEKMHAPPADESIPLCTVADLAGADGIIFGLSTRFGMATAQLKSLWDSTGGMWQAGALVGKPAGVFVSTATQQGGQETAAVTWISQLTHHGMIFVPMGYTTPLLFGMDEIRGGSPYGAGTYAGADGSRMPSQLEKDIAQHQGKYFAGVATALRDGEA 204
BLAST of mRNA_M-pyrifera_M_contig1112.2337.1 vs. uniprot
Match: A0A0G4F8J7_VITBC (Flavodoxin-like domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F8J7_VITBC) HSP 1 Score: 254 bits (649), Expect = 8.830e-76 Identity = 127/197 (64.47%), Postives = 152/197 (77.16%), Query Frame = 1
Query: 1 SLYGHIDAMAKEIKAGIEEAGCECVMLRCPETLPQEVLEKMHAPPKDETIPVVNVADLSNADGILFGMPTRFGMACAQMKAVLDATGSLWQRGSLVGKPGGCFFSTASQASGQETTALTFVTQLVHHGMIYVPIGYS-SPLLFNNDEVHGGSPHGAGTIAGSDGSRMPSDLEKELAKHQGSLFANTCKALKVGRAAT 588
S+YGH+ A+A+E+K G+EEAG EC++ + ETL EVL+KM APPKD IPVV+V L +ADGILFG PTRFG CAQMKA+ DATG LWQ G LVGKP G FFSTA+QA GQETTALT +TQ HHGMI+VPIGY+ + F+ E+HGGS +GAGT AG+DGSRMPS+ E LAKHQG F N KA+K GR +T
Sbjct: 42 SMYGHVRALAQEMKKGVEEAGGECLLYQVAETLSDEVLKKMSAPPKDTDIPVVDVHTLPDADGILFGTPTRFGAMCAQMKAMWDATGGLWQGGKLVGKPAGIFFSTATQAGGQETTALTALTQFTHHGMIFVPIGYTLGEVQFDMSEIHGGSAYGAGTFAGADGSRMPSEKELALAKHQGKYFTNVTKAIKAGRQST 238
BLAST of mRNA_M-pyrifera_M_contig1112.2337.1 vs. uniprot
Match: A0A7S4B3E4_CHRCT (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B3E4_CHRCT) HSP 1 Score: 251 bits (642), Expect = 2.700e-75 Identity = 123/182 (67.58%), Postives = 147/182 (80.77%), Query Frame = 1
Query: 1 SLYGHIDAMAKEIKAGIEEAGCECVMLRCPETLPQEVLEKMHAPPKDETIPVVNVADLSNADGILFGMPTRFGMACAQMKAVLDATGSLWQRGSLVGKPGGCFFSTASQASGQETTALTFVTQLVHHGMIYVPIGYSSPLLFNNDEVHGGSPHGAGTIAGSDGSRMPSDLEKELAKHQGSLF 546
S+YGHI ++A E K G+E AGCE +L+ PETLP+EVL+KM AP K + P+ DL + DGILFG+PTRFGMA AQMKA +D+TGSLWQ G+LVGKP G FFSTA+QA GQETTALTFVTQL HHGM++VPIGYSSPLLF+ E HGGSP+GAGT+AG DGSR P DLE+++A HQG F
Sbjct: 12 SMYGHIRSLAVEEKKGLEAAGCEVTLLQVPETLPEEVLKKMGAPDKPDD-PIAEAKDLPSYDGILFGLPTRFGMAAAQMKAFMDSTGSLWQTGALVGKPAGIFFSTATQAGGQETTALTFVTQLTHHGMMFVPIGYSSPLLFDLSEPHGGSPYGAGTLAGPDGSRQPLDLERKVAAHQGEYF 192
BLAST of mRNA_M-pyrifera_M_contig1112.2337.1 vs. uniprot
Match: A0A814FNY1_9BILA (Hypothetical protein n=1 Tax=Rotaria sordida TaxID=392033 RepID=A0A814FNY1_9BILA) HSP 1 Score: 244 bits (624), Expect = 3.720e-72 Identity = 123/206 (59.71%), Postives = 150/206 (72.82%), Query Frame = 1
Query: 1 SLYGHIDAMAKEIKAGIEEAGCECVMLRCPETLPQEVLEKMHAPPKDETIPVVNVAD-----------LSNADGILFGMPTRFGMACAQMKAVLDATGSLWQRGSLVGKPGGCFFSTASQASGQETTALTFVTQLVHHGMIYVPIGYSSPLLFNNDEVHGGSPHGAGTIAGSDGSRMPSDLEKELAKHQGSLFANTCKALKVGRAA 585
S+YGHI +AK I G+E AG E +++ PETL +EVL KMHAP KD+T+P ++ A L N DGILFG PTRFG AQ+KA+ DATG LW +GSLVGKP G FFST +QA GQETT LT +T +HHGM++VPIGY+SPLL N DE+HGGS +GAGT AGSDGSR P+DLE ++A+HQGS F ALK+GRAA
Sbjct: 19 SMYGHIATLAKSILKGVEAAGAEARLIQVPETLSKEVLTKMHAPEKDKTVPTISFAPGTENTVTLEDALVNCDGILFGYPTRFGGMPAQVKAIWDATGGLWMKGSLVGKPIGVFFSTGTQAGGQETTTLTSLTNFIHHGMLFVPIGYTSPLLANMDEIHGGSAYGAGTYAGSDGSRKPTDLELKIAEHQGSYFTQVATALKIGRAA 224
BLAST of mRNA_M-pyrifera_M_contig1112.2337.1 vs. uniprot
Match: A0A6V3ADJ7_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V3ADJ7_HETAK) HSP 1 Score: 241 bits (614), Expect = 8.100e-71 Identity = 122/198 (61.62%), Postives = 148/198 (74.75%), Query Frame = 1
Query: 1 SLYGHIDAMAKEIKAGIEEAGCECVMLRCPETLPQEVLEKMHAPPKDETIPVVNVADLSNADGILFGMPTRFGMACAQMKAVLDATGSLWQRGSLVGKPGGCFFSTASQASGQETTALTFVTQLVHHGMIYVPIGYSSP-LLFNNDEVHGGSPHGAGTIAGSDGSRMPSDLEKELAKHQGSLFANTCKALKVGRAATA 591
S+YGHI AMA ++K G+E +GCE M + ETLP+EVL M AP K E PV++V +L NADGI+FG+PTRFGM AQMKA+ DATG LWQ G+L GKP G FFST +Q GQETTALTFVTQL HHGM++VP GY+ P FN +E+HGGSP+GAG AG+DGSR PS+LE +A QG+ F KAL +GRAA A
Sbjct: 10 SMYGHIKAMADKVKEGLESSGCEVQMYQVAETLPEEVLANMGAPAKPED-PVLDVNELPNADGIIFGVPTRFGMMAAQMKAMFDATGGLWQSGALTGKPAGIFFSTGTQGGGQETTALTFVTQLAHHGMLFVPNGYTCPGTQFNMEEIHGGSPYGAGCYAGADGSRQPSELELAMAASQGAHFGGVAKALALGRAAAA 206
BLAST of mRNA_M-pyrifera_M_contig1112.2337.1 vs. uniprot
Match: A0A817TQW6_9BILA (Hypothetical protein n=7 Tax=Rotaria TaxID=231623 RepID=A0A817TQW6_9BILA) HSP 1 Score: 239 bits (610), Expect = 4.860e-70 Identity = 128/206 (62.14%), Postives = 149/206 (72.33%), Query Frame = 1
Query: 1 SLYGHIDAMAKEIKAGIEEAGCECVMLRCPETLPQEVLEKMHAPPKDETIPVVN----------VAD-LSNADGILFGMPTRFGMACAQMKAVLDATGSLWQRGSLVGKPGGCFFSTASQASGQETTALTFVTQLVHHGMIYVPIGYSSPLLFNNDEVHGGSPHGAGTIAGSDGSRMPSDLEKELAKHQGSLFANTCKALKVGRAA 585
S YGH+ +AK I G+E AG E +++ PETL +EVL KMHAP KD TIP ++ V D L N DGILFG PTRFG AQ+KAV DATG LW +G+LVGKP G FFST SQ GQETTALT +T VHHGM++VPIGY+SPLL N DEVHGGS +GAGTIA S+GSR PS+LE +LA+HQGS F ALKVGRAA
Sbjct: 31 STYGHVATLAKNILKGVEAAGAEGHLIQVPETLSKEVLGKMHAPDKDSTIPTISFVPGVANTVTVEDALVNCDGILFGFPTRFGGIPAQVKAVWDATGGLWMKGALVGKPIGVFFSTGSQGGGQETTALTSLTNYVHHGMLFVPIGYTSPLLGNIDEVHGGSAYGAGTIASSNGSRQPSELELKLAQHQGSYFTQVATALKVGRAA 236
BLAST of mRNA_M-pyrifera_M_contig1112.2337.1 vs. uniprot
Match: A0A061SPA8_9CHLO (NAD(P)H dehydrogenase (quinone) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SPA8_9CHLO) HSP 1 Score: 237 bits (604), Expect = 1.040e-69 Identity = 115/195 (58.97%), Postives = 145/195 (74.36%), Query Frame = 1
Query: 1 SLYGHIDAMAKEIKAGIEEAGCECVMLRCPETLPQEVLEKMHAPPKDETIPVVNVADLSNADGILFGMPTRFGMACAQMKAVLDATGSLWQRGSLVGKPGGCFFSTASQASGQETTALTFVTQLVHHGMIYVPIGYSSPLLFNNDEVHGGSPHGAGTIAGSDGSRMPSDLEKELAKHQGSLFANTCKALKVGRAA 585
S+YGH+ +A + +G++EAG E + + PETLP+EVL+KM AP K + P++ L ADG+LFG+PTRFGM +QMK+ LD+TG LW G L+GKP G F ST SQ GQETTALT +TQL HHGM++VP+GYS+ L + E+HGGSP+GAGT AGSDGSR PSDLE ELA+HQG +F T KAL VGR A
Sbjct: 11 SMYGHVKKLADSVASGLQEAGVEVRLFQVPETLPEEVLQKMSAPAKPDD-PIITAEQLVEADGVLFGIPTRFGMMASQMKSFLDSTGGLWLNGRLIGKPAGMFCSTGSQGGGQETTALTAITQLAHHGMLFVPLGYSNMKLADMSELHGGSPYGAGTFAGSDGSRNPSDLELELARHQGKMFGETTKALVVGRQA 204
BLAST of mRNA_M-pyrifera_M_contig1112.2337.1 vs. uniprot
Match: A0A818CBB6_9BILA (Hypothetical protein n=5 Tax=Rotaria socialis TaxID=392032 RepID=A0A818CBB6_9BILA) HSP 1 Score: 237 bits (604), Expect = 4.660e-69 Identity = 121/207 (58.45%), Postives = 149/207 (71.98%), Query Frame = 1
Query: 1 SLYGHIDAMAKEIKAGIEEAGCECVMLRCPETLPQEVLEKMHAPPKDETIPVVNVAD-----------LSNADGILFGMPTRFGMACAQMKAVLDATGSLWQRGSLVGKPGGCFFSTASQASGQETTALTFVTQLVHHGMIYVPIGYSSPLLFNNDEVHGGSPHGAGTIAGSDGSRMPSDLEKELAKHQGSLFANTCKALKVGRAAT 588
S+YGHI AMAK I G+E AG E +++ PETL +VL KMHAP KD+T+P + + + L N DGIL G+PTRFG AQMKA+ DATG LW++G+LVGKP G F ST + GQETT LT +T HHGMI+VPIGYSSPLL N E+HGGSP+GAGT + DG+R PS LE ++A+HQG+LFA+T ALKVGRAAT
Sbjct: 31 SMYGHIAAMAKSILKGVEAAGAEGRLIQVPETLSADVLAKMHAPEKDKTVPTITLDEAGENTVGLEDALVNCDGILLGVPTRFGGIPAQMKALWDATGGLWKKGALVGKPIGVFISTGTPGGGQETTTLTSLTNFCHHGMIFVPIGYSSPLLMNLTEIHGGSPYGAGTFSAPDGTRQPSQLELQVAEHQGTLFAHTATALKVGRAAT 237
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 305.8 |
| Seed ortholog evalue | 1.4e-80 |
| Seed eggNOG ortholog | 2880.D8LTD7 |
| Preferred name | PST2 |
| KEGG rclass | RC00819 |
| KEGG ko | ko:K03809,ko:K14015 |
| KEGG Reaction | R02964,R03643,R03816 |
| KEGG Pathway | ko00130,ko01110,ko04141,map00130,map01110,map04141 |
| KEGG Module | M00400,M00403 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000166,GO:0000785,GO:0000792,GO:0003674,GO:0003824,GO:0003955,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005694,GO:0005737,GO:0005739,GO:0005886,GO:0006091,GO:0006325,GO:0006342,GO:0006355,GO:0006996,GO:0008150,GO:0008152,GO:0009055,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010181,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016020,GO:0016043,GO:0016458,GO:0016491,GO:0016651,GO:0016655,GO:0019219,GO:0019222,GO:0022900,GO:0030466,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031934,GO:0032553,GO:0036094,GO:0040029,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044237,GO:0044422,GO:0044424,GO:0044427,GO:0044444,GO:0044446,GO:0044464,GO:0045814,GO:0045892,GO:0045934,GO:0048037,GO:0048519,GO:0048523,GO:0050662,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051276,GO:0055114,GO:0060255,GO:0065007,GO:0071840,GO:0071944,GO:0080090,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 |
| EggNOG free text desc. | NAD(P)H dehydrogenase (quinone) activity |
| EggNOG OGs | COG0655@1,KOG3135@2759 |
| Ec32 ortholog description | flagellar associated protein, quinone reductase-like protein |
| Ec32 ortholog | Ec-02_005960.1 |
| EC | 1.6.5.2 |
| COG Functional cat. | J |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko01000 |
| Exons | 6 |
| Model size | 2318 |
| Cds size | 570 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815623.7197256-UTR-M-pyrifera_M_contig1112:400..424 | 1622815623.7197256-UTR-M-pyrifera_M_contig1112:400..424 | Macrocystis pyrifera P11B4 male | UTR | M-pyrifera_M_contig1112 401..424 + |
| 1692277492.6146526-UTR-M-pyrifera_M_contig1112:400..424 | 1692277492.6146526-UTR-M-pyrifera_M_contig1112:400..424 | Macrocystis pyrifera P11B4 male | UTR | M-pyrifera_M_contig1112 401..424 + |
| 1622815623.8077388-UTR-M-pyrifera_M_contig1112:7599..9323 | 1622815623.8077388-UTR-M-pyrifera_M_contig1112:7599..9323 | Macrocystis pyrifera P11B4 male | UTR | M-pyrifera_M_contig1112 7600..9323 + |
| 1692277492.6795545-UTR-M-pyrifera_M_contig1112:7599..9323 | 1692277492.6795545-UTR-M-pyrifera_M_contig1112:7599..9323 | Macrocystis pyrifera P11B4 male | UTR | M-pyrifera_M_contig1112 7600..9323 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815623.7332964-CDS-M-pyrifera_M_contig1112:424..522 | 1622815623.7332964-CDS-M-pyrifera_M_contig1112:424..522 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig1112 425..522 + |
| 1692277492.6260343-CDS-M-pyrifera_M_contig1112:424..522 | 1692277492.6260343-CDS-M-pyrifera_M_contig1112:424..522 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig1112 425..522 + |
| 1622815623.7450259-CDS-M-pyrifera_M_contig1112:1473..1550 | 1622815623.7450259-CDS-M-pyrifera_M_contig1112:1473..1550 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig1112 1474..1550 + |
| 1692277492.6346266-CDS-M-pyrifera_M_contig1112:1473..1550 | 1692277492.6346266-CDS-M-pyrifera_M_contig1112:1473..1550 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig1112 1474..1550 + |
| 1622815623.7580762-CDS-M-pyrifera_M_contig1112:3063..3249 | 1622815623.7580762-CDS-M-pyrifera_M_contig1112:3063..3249 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig1112 3064..3249 + |
| 1692277492.6438622-CDS-M-pyrifera_M_contig1112:3063..3249 | 1692277492.6438622-CDS-M-pyrifera_M_contig1112:3063..3249 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig1112 3064..3249 + |
| 1622815623.770899-CDS-M-pyrifera_M_contig1112:5574..5593 | 1622815623.770899-CDS-M-pyrifera_M_contig1112:5574..5593 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig1112 5575..5593 + |
| 1692277492.6530602-CDS-M-pyrifera_M_contig1112:5574..5593 | 1692277492.6530602-CDS-M-pyrifera_M_contig1112:5574..5593 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig1112 5575..5593 + |
| 1622815623.782747-CDS-M-pyrifera_M_contig1112:6359..6474 | 1622815623.782747-CDS-M-pyrifera_M_contig1112:6359..6474 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig1112 6360..6474 + |
| 1692277492.6620965-CDS-M-pyrifera_M_contig1112:6359..6474 | 1692277492.6620965-CDS-M-pyrifera_M_contig1112:6359..6474 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig1112 6360..6474 + |
| 1622815623.7953975-CDS-M-pyrifera_M_contig1112:7524..7599 | 1622815623.7953975-CDS-M-pyrifera_M_contig1112:7524..7599 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig1112 7525..7599 + |
| 1692277492.670898-CDS-M-pyrifera_M_contig1112:7524..7599 | 1692277492.670898-CDS-M-pyrifera_M_contig1112:7524..7599 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig1112 7525..7599 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig1112.2337.1 >prot_M-pyrifera_M_contig1112.2337.1 ID=prot_M-pyrifera_M_contig1112.2337.1|Name=mRNA_M-pyrifera_M_contig1112.2337.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=190bp
MAKEIKAGIEEAGCECVMLRCPETLPQEVLEKMHAPPKDETIPVVNVADL SNADGILFGMPTRFGMACAQMKAVLDATGSLWQRGSLVGKPGGCFFSTAS QASGQETTALTFVTQLVHHGMIYVPIGYSSPLLFNNDEVHGGSPHGAGTI AGSDGSRMPSDLEKELAKHQGSLFANTCKALKVGRAATA* back to topmRNA from alignment at M-pyrifera_M_contig1112:401..9323+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_M-pyrifera_M_contig1112.2337.1 ID=mRNA_M-pyrifera_M_contig1112.2337.1|Name=mRNA_M-pyrifera_M_contig1112.2337.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=8923bp|location=Sequence derived from alignment at M-pyrifera_M_contig1112:401..9323+ (Macrocystis pyrifera P11B4 male) AGCTTATACGGGCACATAGACGCAATGGCGAAGGAAATCAAGGCCGGCAT
TGAAGAGGCAGGGTGTGAGTGTGTCATGCTGCGGTGCCCGGAGACTCTGC
CCCAAGAGGTGCTGGAGAAGATGTGAGTAACCAGGACCGCTTTTCGAAAC
CCTTCGTGTTGGAATACATCGCCTAAAATCCCTACAACAATATACACACA
TCCTGTACGAGTACATGCTTTAAAGCTTGTACTGCTGTAGTAGGTGTGCG
ATCACTGCATTCGCGTGAACTCAGCGAAACGTCGATGCGTGGTGCCGATC
GCCGTGTAGATGAAAGGTCGAGGCTCATAACCTTTTGGAACGGTATGCGT
CGAGGCTCTCACGGCAACAGAGCGTCGACACACACCATTCCAGCATGGAA
CATCTTGTACTACAGTAGTACACCCACCACCCGCGCTTCGCGGACAAAGT
TTTCACACTTGCAATCAGAGATGGACCATTTTTTGGAGTAGTCAAAGGAT
ATGTCGGATTAAGTGGGGGGTGAGCCAATGAGATCTACTACACGTAACGC
ACGCGTTGGCCTCCACCCGTCGATATATTGCACGATTTGAAAGTGTCGAG
ATCTAAAGCTTGCTCCTATATATGCTGTTCGTCGTCCGCGGTGGAGGCGT
TATGGTATGCCAGGTACAAGGTACCAGGGAATACATAGCCGCCAGAGCGT
TTTCGTGGAGATATCACATCCTGTACATTCTCTCCTGTTTCTCTACATGC
AATAATTCGACAAAATACATTTTATCCACCATTATAGACTGCATGGTAGT
CAAGACCAACACGCTGCGGGCTACGAAGATGTAGTACTTCGAAGTACGTA
TTTTTGTAGCTAGAGAGATCAAGACGGTCTAAGATACCCTGTCACTACTA
CGTCATAGCTTTTCATCCCGCAACAGTCGGGAAACACATTCGTTCATGCG
TAGTGAACATTATGCGCTCCTGCTTGCAATTTTCTAATTTCTCGCCGCTC
CGTCACCGTTGTCGCCGACTTTACGCTTTCGTTTGTTTCTCTGATCCCTG
CTGGAAAAATCAACCAAATTCAGGCATGCACCCCCCAAGGACGAAACGAT
TCCTGTCGTGAACGTCGCGGACCTTTCTAACGCCGACGGCATTCTGTTTG
GTGAGAATTCGGAGAACGTTCGCATGAATATTCCAGAACTGCAGAACGGT
CTAAACGAAGAAGGGCGAGGGCGGGTGTCTGGTCGGCGATGGTAGCTAAC
GAGGACCATGGCGGCTCTATCATACGTGTCGCGTATCGGCATGGCGTGTG
TAAAAGCCTCTCGACTTTGATCTTGCGCGATGTTTCTGTTTTTTTCTTGC
CGTGGGCACGTCCATGAGAGTGTAGCCTATACTGGTATAAACTTTACCAG
TCTCGTTTGGTGTTTATGTCCCCCGTCCAACAAACTGCTGTGTTATTAGG
CCTACCCCAAGTTGATGGACTGCTCACCAGACGTGTTGCGTATACGTCGT
CTGTGAATATGCACTACGAGTAGAATAGTTTCCTTTCGGGCTTTAGGATA
ACAGCAGTCCCGACATAAGACGGAACACGATTAACCGTTCAAAACATCAA
CGGCAACACCACTGCGTGATGGGAAACGAGTGCCCTCCGCCCCCGCCACC
CTCACCAAGATTTTCGAGGCGAACATCAAACGCAAGTGGGAGATGGTCAG
AAGGTGGTCGATACCCGCCTTTTTAAGCCTAACGGAGGGGTAGGGAAAAC
ACGCCCGCGGGAGGTGCCTGCGCGTGCCCCCAACTGCCTCAGATTGAATT
ATGACTCGTTGGTAAGACGCCCACAGCCCATGCATAGCACGCACACCATC
TTTTGTTTTTCGGGCACGCCTTTGGGGCTGATGGCACCGTAGCGCAGGGG
GGTGCCCAAGAACCCCCCTCCCTTTCAGCTACAACATGAGAGGGGTATGC
CCCCGCAATTCTACGATGTTTGATGTATTTCCCCTTTTTTACTGGCGTTT
GCCCCATTTGGCCGTAAATTCGCCTCTCGTTGGCGACTTCAGATTGGTGC
CGAATCTGTTCTAAACAGACCCAAGGGTTGAACATTTTCGCCGAAGTTTC
TGCCTTGGTTTTGTTCAGAACAGATTCACGGCAGAACATCGAAGCTGCCC
AAAGTGCTCAATAGGGGTATTTTTTCGGCCAAAAGGCGGGGGAAATGACA
CCCAAAAGGTAATATGTACATAAATCTGGTAGAAATGCGAGGGCATAAGC
ATAAACCAAGTGGTGTTCAAAATGAGAGATCCTTGTGCACCTTCCTGCAA
TACGAAGCCCTCGGACCCAATAGCGTGCCCGAAAAACGAGACGGCGTGCG
CGCTCTGCATTGGCTGTGAAGCGTCTTGCCAGCGCGTAATTATTGAACTT
GAGGCAGGTTGGAGAAAGTGCGGGCATCTCTCTCGACGTCTTTTCCCTCC
CCTCTGATGTTAGGCTGAGAAAGGTGGGCGTACACCCCCCTGTTGCGATC
TCCTGAAGTAAATCGTTCTTTTCCCACTAGTGTCGACGTGATTTTCATCT
CCCACCCCGTAAACCGACTGGATTGATTGCGTTGCATCGGGTTCGAAGGA
TGCAGTACCAACCAAACCATTCGCGCGTTCTCCCACCCTTTCCGCGTGTT
GACGGCATGAAAGGCATGCCCACTCGCTTCGGCATGGCGTGCGCCCAGAT
GAAGGCCGTCCTCGACGCTACCGGCTCTTTGTGGCAAAGGGGCAGCCTCG
TGGGCAAGCCCGGCGGCTGCTTCTTCTCGACTGCCAGCCAGGCGAGCGGC
CAAGAGACGACGGCGCTGACATTCGTCACGCAGCTCGTGCACCACGGAAG
TGAGTTTTTTTTTTTTTTAATTGTAACAAGTGTACCATCAGCCGCTGACG
TAAAAACAAGAACTTGATAATTGGAACGCTAGATTGCACAAACGGCCCGC
CCTGTCCATGAAGCGTCGTTGGTTATGCCGGACTGGCCAGTACGAAAGTA
TATGCACGACTCTGGTTGGAAATGTAAGAACCGGTTGGTCTTCATATCAA
TGTTCCTTATATTTCCGCGCAGGGTGGCATGTCTAAAAGTATATGTACTG
GAATGTTTATAATGGGACAGGGGGGTGAAATGTTGAACGTTGAAAACAAA
ATGTTTTCTAGGAGACGACAATATTTTCATACTACTCCCAAGACAATATT
TAAACCCCTTGAGAATTGCACCCTCGTTTTTTGGGACAAACTACTTGGAA
TTAGCATAGGATCACGTTTACATTAGAGAAATGGTTAATTTCCACATCGT
GGGAAGACGATAAGTATTTTTTCAACCTCCCGCCCAGAACAGAACTATCT
ATCACTAGATATATAGATCCTGATTTAACATTTTCTGAGGACATTTATGT
GCGCTAATTATATATACTGGTAGCGAGCAACACCCCGGGAATTAATCCAG
GGTCAACAGGAGCATGTAAGGATGGGTACCAACTATTTTGTGCTGAAATA
TGTGTTCGGGTCGTCCGTCCGTGCTGTTTATTGAGTGATGTGAAATTTCT
TTGCGTTCTCGATCGCTTTCGTGATTTACTTTTCTACTACTGTGGGTGTC
AGCTCGCTTTCAATAGTTGCATGAGTGGTGGGTTGGTGGTTTTGATAGAG
CTGCCGTACACGTTCCTCTATGCCTGCGATACTGCGGCGGTGGATGCTGG
ACTACGGAGGTTTCGGGGCTTTGTTGTCTGACGAGGGGTTAGTGTTTTGA
ATGGCGTGTCCTCGGTCAGTGGATCCAGCCTCAACTGGGTGGCTGGTCTG
CCTTGGGGCAGTCCATGATGATACTGATACAACTCATGTATGTCAGGAGT
CCGTTATCATAATGAAACGATTCATGTATATCAGAAGCCCGTGGTACCAT
GATAAAGTTGATGCATGTTGTGCATGTCTGGAGCCCGTGATATGTGTCTG
GAGTAGTATTAATAGTAGTTTACCACACCCTAGGCTTGGACGACAAACAA
ATTGCAGACAAACGCGGGCAATTGCTGGCGCCGCATCTCTTCGTACTGTT
TTATTCTTATAATTGCTCGGATGGTATTGACGATGCTATCGATGAACCCT
TTTTAAAATTGAGAGGGGAAAAGCGATGAACCACACGTACAACCACGATT
GATTAGCATAGGCCATACAAATCAGCACGGGCTGCTTGCTAGGTTAAGGG
ATACGCTAAATGTGGGGTCCGAGCTACATCGCATGCGCGCAAAACGATAG
TACCTGTGCTGCTATGTACGCGCTCACGCTGCCTAGACGATTGATAACAC
CCTCTACCTGTCGTTTCAGTTTCCGGAAGCATGATAGGGTAGGGGTTCAC
TGTTCCACCATTTTGTATTCGAGGGTCCTTACTTGAGGAGCCCCATGCCT
ATCCCAAGACTGGCTCTAAGACAAGATGTGCGCTCAACCCGCTGACCCTT
CCCATGGCCCAGGTGTACAAGGCATGCCTTATTGAACGAACACGGGATTC
CACCAATATTGGGTAGTTCGTCACTTGAATCCTTTCAGGACTGCAGTCCC
GTTTGAAGGACAAACTACTTGGAATTTGAGTGATTGGTCCCCAAAACGGG
ATACCGGTTCTGAAAGGGTTAAGGGGCCCCGTCAGTCAGATGCAAACGAT
ATTGGTCGAAAAGGAGGGGAGTTCAGCACTCATGCGGCACCATGGTTGGG
GGTCACTGATATGTACGATACGAATTTAGCATATCCTAACCCTGACCCCA
ACCCAATCAGCCCCAATTAACCATTGGTTAGCGTCATTAATAGTCCCTGT
CTCGCACACAGTATGTGCCAACCATAGGATCGAATAAAATCCTATTGCCA
AAAAGTGCTACCCTAACATATCGAAGCACGTGTTGCCACTATTCCTGGAT
CCCAAGAGGGTTACGTAATAGTCTCCTAACTTTGCCTCTGCTCCTTTTTT
GCACCCCACCGGTATTTGCCCCCATATCTCGTAGCGCGTATCCTCGCTAT
ACTTGGGTCCGAAGAGGGCGACGAAATAGTATCCTGAAATTGCCTCTGGT
CTTTTTTTGTACCTCGCCGCTGTATACGTGCTGCCTTTTTTTTATGTTCG
ACTACGCCGTCTTCACCGGTGAATCGATGTGCGTGCTACGGGTGTTGGGC
GCTTTTGGCATGGCGTCTCTTCAGTGATCTACGTTCCCATCGGGTGAGCC
ACGAAAACTGCGAGAAATATTAACAGGCATCGCTTAGACTTGCGAGAGCT
ATGCCAACTAACGTCAGAGTTTGGGTTTAGGCTTGATGCGTCGTGGACTT
GTTGAGCGTCGATTTTTCCTCCCGAAACTGCCTCCATTGCAGCGAAACAA
GTTTATCGGAATACGCTATGTCTAGCAGGCGTGGGTTGCCGCTTCAGCTC
ATTCTGTGCCACATGATCGTTCCTCATCCGTTTGTCATCCATGATGCGCT
TTTGTCCAATGGGGGGACTGTTTCTGCTCATGACTTTGCGAGATGGCACT
TTTGCCTCCCAGGGGTTAACGTTTCTGCTCATGGCCTTCCTCAGAAAAAC
TAGCGCGTGCATCCCAAAAATAGCGTGCATGTCTCCCTGGTTCCCGTCAA
ACGGAACGAACTGTGGGTTGGGGCCCGTTCGACTGTACACGGACAGGATG
CGTCAACCGACTGGATCGTGCGTGTCCCAAACGAGACGCCGCCGCAGCGA
GGGAGGAGGGGGGGGGCTTGCCTTAATTGTGTGGTTGGTCAACATTTTAT
CCCTACGAGTATAGCTCAGTAGGTAGCACACCACCTTTACACTATCGTAT
CGTCTCCCTCGGATGCGGCAACTAATTATTGCCGTGAGTTACAGCAATAG
TAGGAATTCCAATACATTTTTAGTGGTAGAAGTTTGTTATTAATAATGGA
CTTTGTTTTTTATTTGTCGTGTGCCGCGTTCTTTTTATCATAAATCCTGT
GGAGTGCAGGTACTCTTCTCCGCTCCTGTTCAACAACGACGAAGTACACG
GTGGCAGCCCTCACGGCGCGGGCACCATCGCTGGCTCCGACGGCAGCCGC
ATGCCTTCAGACCTGGAGAAGGAGGTAAGTGCAACGTGTATTCAAGCTAA
ACCTCATTCCCGTAGCGCCGCCGCCGTCGCTGCTTTTGCAGGATTCAAAT
ACCGATTAGAAAGAGGCCCCGCCTCAGCTGTGTTATCGAGAAATTCGCCG
AAACTCATATTTTGAATTTGTGTTGTATACGTGATGCCTCTTGGTGCCTG
GTATACTACAGCTGTTGCGAACGGTTTCTGCACACCCGCGCCTGTGCGGA
GATGACTCCACATGCTTATTTTTTTGTGATTGGTGCTTTGCCATCGGCCA
TTGTGCAGAAATGAGCTTAAACATTGATCACTCATAAGCACCCCCAGAAA
GACGAAGAAAACTAAAAGGGATCAAAGAAGGGTCCTTTCAATATTAATAG
TATCATTAAAGTACAGTGTTCCCCACCCGACAGTGTTCCGCATGACCTTA
AGCGTTGATCACTCAGAAGCATTGCCCACAAGACTAAACCAAGGGAAACC
AGAACCAAAAGGAAACACGAAGTCTGACTTCCTCATGTGTCTGCCTTCTA
TTAATAGCTCGACATCGATCATCGATCTACTCCACTTGAGACTGTAGAAA
TCTCTGGATGTGAGGTATGCACATATTTACGCATGGTCCGCCCCGATACC
CCCAACCTACGAATGGTTTCTTGCCGTAGATGCCTCCGGTAGAAATGAAG
AAATATCTACCCAATTATCTACCGAGGGAAGCATTAGGGGATTTCACCCC
CTGCCGTACCACTTCCTACTTCGACTGGGCCGATATACCACTTAGCACTG
AAATACAAGGACCCTTTCGGATTGTAATTTTGGATGTTTATTGTGTTTGT
AACTTCCAAACGGTTCTTGTACGGGGCAATAATGTGAACACCGAAACGGT
CCTTACGTTTCCGGACAGAGTGGTGGCATCGATTTCTTGGCGAAAACCAC
GGGGCATTGTAGGCTATAAATAGTTGATACATACTGTACCAGATGGATCA
TAATTATCTGAACCTAGCCGAACCCCTCCCCCCCCCACCCGTTCGCCGCA
CGCATGCGCATACGCGGCCCAAAGCTTGCTAAGCACCAGGGGTCCCTCTT
CGCCAACACATGCAAGGCGCTCAAGGTTGGCCGCGCCGCCACCGCGTAGG
AAGCGGATTCCGCCACTGCTGCACCACCGAACATTTTTACCGCAAATCGG
TTGGTGTGGGGCTTCATTGATCTGTTCACATCAGATAAACCTCAACATAC
ACAATGGCGTGCTGTGTCTGGTGTTTCGTAACGGGAAGAACCCCAAATAC
CAAGTTACGTGTTGTGAATATAAATTATACCCTATACCTGGTATGTTATA
CTCCTTTTTTTTATTCTACTGTAGCTGGTATCGAGGTTTTCGCTGAACGT
TGTCGGAGGGAAACAACAAAAATGTGTATACCTAAGACTTGGTATGATGT
ACGGCCGGGAGTAGAGACCCTCTCATCGTCTTGCTGTACGGTACGAACCA
CGTGGTGTTCTTGCTGTCGGTCTTCTGTTTCTCGTCTGAAAAAATGAGAC
TATGCAGTGTTCAGCGGTATATAGTACTTCGCGGGAGGGAAGGAGGCGCA
TTTAGGGCGGCTGAATGTACGGGTCAGGAGTACGTACTGTAGGCATTTTG
ATACAGGGATCAATAGGCAAGACGAAGTACGAGTGGGCACTCTTGCGAAA
CGCGCATTAGATGTGTATGATCGAGATGTTAAGTGTCGCTTGGGCTGTTA
GGCAGGAGACATATATCGTAACTCGATGGCGACGGCGACTGCAAATGTTG
CGTTATTTAAAAAGATTTGGCACACAAAAGTACAAGGTTTGTTTGCTGTT
TCGCACGCAAACTACGCGGTTGTACTATTAATAGCGAGATTTCCGCATGA
GGCGTGTGGTGTGCCGCTGATTGACGCCAGACAGCCCGTAGAAGGCAAGC
GTTGGCAGTCGGGGTTAGCTGACCGGGTGCATGTGAGCTCCACCATCGGG
GAGATACGTAGTCAAAGTAGTGGCGCTCTGAGGCCAGTTGTGTTGATTGT
CGGTGGCGGTGTCTGTAAAGACAGCATGAGAAGAAGAGGAGAAGAGGGAG
AGTGTGCGCGTGAGACACGATCGGTTTCATGCTACGAAACAGAAAAAAAC
AGGCACGAAGACCCACGACACGCGGCGTGACCCTATCAAAACTAAAATTG
AGTAAGATCGAGTGGTTTATTGAGGTTTCACCTCATGAAACATGCGAGGT
GACTCCACGCTCTGAAACCGCCTCAACAGCTCACAACGCTGCTGCTCTGC
TCTTCGCGCTGTATCGAATGACTGTGCTTCCGGGAGCGAATCGATAGGCT
AGTGGCTACTTCTGCTTTGATGCGTGCTAATCACTGACACGCCCCCTCGA
TGGAGAAAGCATATTCGCCATCAGTTATAGTCCACTGTCTTTGTTCATCG
ATTTGAGTGCATAAATCAACGTGGTTCTGCAGTAGTTTTGCTTGACACTT
GCTGCAAGTGTCAGCCGTAACCTTATCCCGTTTTTTTTTCGGGAAGTTCT
GACTCTCGGTAGTTGTGGATGATGTACTTGTGTAGCTTTTCTTCTTGGTA
TTTTCGCGTGAAATGTTGTAATCTCAACAAAGTACCATGTTCCTTTCCCG
TATCGAGAAACGTCAATCGTTCCTGCGTCGCTTTCGATGGGTAATCAATC
CTTCTCTAGGATGATCATACCCCGTACGTTAATAATACAGGTACTAAACA
CTATCCATACTGCCCCATGGTGTTTGGTGTAGTACCCAAGAGGTGGATGT
GCACTTACTTGCGGGTTTGTGTTGTTATGAGAGACGTCGATGAGACTAAA
TCTTACAATTTCATCTCTGGGAT back to topCoding sequence (CDS) from alignment at M-pyrifera_M_contig1112:401..9323+ >mRNA_M-pyrifera_M_contig1112.2337.1 ID=mRNA_M-pyrifera_M_contig1112.2337.1|Name=mRNA_M-pyrifera_M_contig1112.2337.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1140bp|location=Sequence derived from alignment at M-pyrifera_M_contig1112:401..9323+ (Macrocystis pyrifera P11B4 male) ATGGCGAAGGAAATCAAGGCCGGCATTGAAGAGGCAGGGTGTGAGTGTGT CATGCTGCGGTGCCCGGAGACTCTGCCCCAAGAGGTGCTGGAGAAGATAT GGCGAAGGAAATCAAGGCCGGCATTGAAGAGGCAGGGTGTGAGTGTGTCA TGCTGCGGTGCCCGGAGACTCTGCCCCAAGAGGTGCTGGAGAAGATGCAT GCACCCCCCAAGGACGAAACGATTCCTGTCGTGAACGTCGCGGACCTTTC TAACGCCGACGGCATTCTGTTTGGCATGCACCCCCCAAGGACGAAACGAT TCCTGTCGTGAACGTCGCGGACCTTTCTAACGCCGACGGCATTCTGTTTG GCATGCCCACTCGCTTCGGCATGGCGTGCGCCCAGATGAAGGCCGTCCTC GACGCTACCGGCTCTTTGTGGCAAAGGGGCAGCCTCGTGGGCAAGCCCGG CGGCTGCTTCTTCTCGACTGCCAGCCAGGCGAGCGGCCAAGAGACGACGG CGCTGACATTCGTCACGCAGCTCGTGCACCACGGAAGCATGCCCACTCGC TTCGGCATGGCGTGCGCCCAGATGAAGGCCGTCCTCGACGCTACCGGCTC TTTGTGGCAAAGGGGCAGCCTCGTGGGCAAGCCCGGCGGCTGCTTCTTCT CGACTGCCAGCCAGGCGAGCGGCCAAGAGACGACGGCGCTGACATTCGTC ACGCAGCTCGTGCACCACGGAATGATCTACGTTCCCATCGGTGATCTACG TTCCCATCGGGTACTCTTCTCCGCTCCTGTTCAACAACGACGAAGTACAC GGTGGCAGCCCTCACGGCGCGGGCACCATCGCTGGCTCCGACGGCAGCCG CATGCCTTCAGACCTGGAGAAGGAGGTACTCTTCTCCGCTCCTGTTCAAC AACGACGAAGTACACGGTGGCAGCCCTCACGGCGCGGGCACCATCGCTGG CTCCGACGGCAGCCGCATGCCTTCAGACCTGGAGAAGGAGCTTGCTAAGC ACCAGGGGTCCCTCTTCGCCAACACATGCAAGGCGCTCAAGGTTGGCCGC GCCGCCACCGCGTAGCTTGCTAAGCACCAGGGGTCCCTCTTCGCCAACAC ATGCAAGGCGCTCAAGGTTGGCCGCGCCGCCACCGCGTAG back to top
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