mRNA_M-pyrifera_M_contig11118.2328.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig11118.2328.1 vs. uniprot
Match: A0A6H5JN10_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN10_9PHAE) HSP 1 Score: 195 bits (496), Expect = 7.180e-56 Identity = 111/154 (72.08%), Postives = 132/154 (85.71%), Query Frame = 1
Query: 43 GVVGMVEIEEEERRLRAKASKLEVEMSAVQRRRLEVHLVKVEQQLHEEASSRLLQREAKVSAEVERACRALAEERDERVGGVAAVKENLRNKLEQLTSMYEEVDSRLASLEKAYXXXXXXLRSRARSDHQKATEKEDRGVRRRIRALMLEHGGK 504
GVVGM EIEEEERRL+ KASKLE+EMSAVQ RRLEV+LVKVEQQL EEA+ RL+QREA+++ EVER+C+ALA ERDERV GVAAVK+NLR KLEQL+ MYEEV +R+ +LEKAY L+ RA +D +KA E+EDRGVRRR+RA+MLEHGGK
Sbjct: 101 GVVGMGEIEEEERRLQEKASKLELEMSAVQSRRLEVYLVKVEQQLQEEAAMRLVQREARINLEVERSCKALAAERDERVSGVAAVKDNLRGKLEQLSIMYEEVSTRMDNLEKAYAQAESELKDRALADQRKAVEREDRGVRRRVRAIMLEHGGK 254
BLAST of mRNA_M-pyrifera_M_contig11118.2328.1 vs. uniprot
Match: D7G239_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G239_ECTSI) HSP 1 Score: 181 bits (459), Expect = 1.400e-49 Identity = 101/143 (70.63%), Postives = 123/143 (86.01%), Query Frame = 1
Query: 76 ERRLRAKASKLEVEMSAVQRRRLEVHLVKVEQQLHEEASSRLLQREAKVSAEVERACRALAEERDERVGGVAAVKENLRNKLEQLTSMYEEVDSRLASLEKAYXXXXXXLRSRARSDHQKATEKEDRGVRRRIRALMLEHGGK 504
ERRL+ KASKLE+EMSAVQ RRLEV+LVKVEQQL EEA+ RL+QREA+++ EVER+C+ALA ERDERV GVAAVK+NLR KLEQL++MYEEV +R+ +LEKAY L+ RA +D +KA E+EDRGVRRR+RA+MLEHGGK
Sbjct: 255 ERRLQEKASKLELEMSAVQSRRLEVYLVKVEQQLQEEAAMRLVQREARINLEVERSCKALAAERDERVSGVAAVKDNLRGKLEQLSTMYEEVSTRMNNLEKAYAQAENELKDRALADQRKAAEREDRGVRRRVRAIMLEHGGK 397 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11118.2328.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig11118.2328.1 >prot_M-pyrifera_M_contig11118.2328.1 ID=prot_M-pyrifera_M_contig11118.2328.1|Name=mRNA_M-pyrifera_M_contig11118.2328.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=319bp GGGGGGGGGGVEAGGVVGMVEIEEEERRLRAKASKLEVEMSAVQRRRLEVback to top mRNA from alignment at M-pyrifera_M_contig11118:452..9804- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig11118.2328.1 ID=mRNA_M-pyrifera_M_contig11118.2328.1|Name=mRNA_M-pyrifera_M_contig11118.2328.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=9353bp|location=Sequence derived from alignment at M-pyrifera_M_contig11118:452..9804- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig11118:452..9804- >mRNA_M-pyrifera_M_contig11118.2328.1 ID=mRNA_M-pyrifera_M_contig11118.2328.1|Name=mRNA_M-pyrifera_M_contig11118.2328.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1914bp|location=Sequence derived from alignment at M-pyrifera_M_contig11118:452..9804- (Macrocystis pyrifera P11B4 male)back to top |