mRNA_M-pyrifera_M_contig110944.2298.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig110944.2298.1 vs. uniprot
Match: UPI001F0486A0 (LOW QUALITY PROTEIN: FAD-dependent oxidoreductase domain-containing protein 2-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F0486A0) HSP 1 Score: 100 bits (249), Expect = 1.600e-22 Identity = 46/104 (44.23%), Postives = 69/104 (66.35%), Query Frame = 1
Query: 1 LVVSCMALQSVHGMKSFHQVVIVGAGPGGLQLAHYLESAHRDYVVIEAAGNAGSFFERNPRFRELISINKRFLEHNGLDFAMRHDWNSLLSDVSHVQVNQGVKE 312
++++ + VH + +VGAGPGGLQ+A+YLE A+R+Y+V E +AG+F+ + PR R+LISINKRF +F +RHDWNSL+SD +++ KE
Sbjct: 8 VILALSLVSCVHSTAPKYDYCVVGAGPGGLQIAYYLERANRNYIVFERGPSAGTFYRKYPRHRKLISINKRFTGQTNKEFNLRHDWNSLISDDESLRMTLYSKE 111
BLAST of mRNA_M-pyrifera_M_contig110944.2298.1 vs. uniprot
Match: A0A7D9E905_PARCT (FAD-dependent oxidoreductase domain-containing 2-like n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9E905_PARCT) HSP 1 Score: 99.0 bits (245), Expect = 5.580e-22 Identity = 44/90 (48.89%), Postives = 65/90 (72.22%), Query Frame = 1
Query: 43 KSFHQVVIVGAGPGGLQLAHYLESAHRDYVVIEAAGNAGSFFERNPRFRELISINKRFLEHNGLDFAMRHDWNSLLSDVSHVQVNQGVKE 312
S + +VGAGPGGLQ+A+YL+ A+R+Y+V E +AG+F+++ PR R+LISINKRF +F +RHDWNSL+SD +++ + KE
Sbjct: 24 SSEYDYCVVGAGPGGLQIAYYLQKANRNYIVFERGSSAGTFYKKYPRHRKLISINKRFTGKTNKEFNLRHDWNSLISDDETLRMTRYSKE 113
BLAST of mRNA_M-pyrifera_M_contig110944.2298.1 vs. uniprot
Match: V3ZD73_LOTGI (Uncharacterized protein n=1 Tax=Lottia gigantea TaxID=225164 RepID=V3ZD73_LOTGI) HSP 1 Score: 99.0 bits (245), Expect = 5.600e-22 Identity = 43/74 (58.11%), Postives = 55/74 (74.32%), Query Frame = 1
Query: 52 HQVVIVGAGPGGLQLAHYLESAHRDYVVIEAAGNAGSFFERNPRFRELISINKRFLEHNGLDFAMRHDWNSLLS 273
H I+GAGPGGLQL +Y+E A RDY++ E + +GSF+E+ PR R+LISINKR + +F MRHDWNSLLS
Sbjct: 34 HDYCIIGAGPGGLQLGYYMEQAKRDYIIFERSNTSGSFYEKYPRHRKLISINKRHTGQSNKEFNMRHDWNSLLS 107
BLAST of mRNA_M-pyrifera_M_contig110944.2298.1 vs. uniprot
Match: UPI00106B084F (FAD-dependent oxidoreductase domain-containing protein 2-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106B084F) HSP 1 Score: 98.6 bits (244), Expect = 7.620e-22 Identity = 46/90 (51.11%), Postives = 63/90 (70.00%), Query Frame = 1
Query: 43 KSFHQVVIVGAGPGGLQLAHYLESAHRDYVVIEAAGNAGSFFERNPRFRELISINKRFLEHNGLDFAMRHDWNSLLSDVSHVQVNQGVKE 312
S + +VGAGPGGLQ+A+YLE A R+Y+V E +AG+F++ PR R+LISINKRF +F +RHDWNSL+SD ++V + KE
Sbjct: 23 SSDNDYCVVGAGPGGLQIAYYLEKAGRNYIVFERGSSAGTFYKTFPRHRKLISINKRFTGQTNKEFNLRHDWNSLISDDETLRVTRYSKE 112
BLAST of mRNA_M-pyrifera_M_contig110944.2298.1 vs. uniprot
Match: R7V1J5_CAPTE (Uncharacterized protein n=1 Tax=Capitella teleta TaxID=283909 RepID=R7V1J5_CAPTE) HSP 1 Score: 98.2 bits (243), Expect = 9.730e-22 Identity = 49/89 (55.06%), Postives = 58/89 (65.17%), Query Frame = 1
Query: 10 SCMALQSVHGMKSFHQVVIVGAGPGGLQLAHYLESAHRDYVVIEAAGNAGSFFERNPRFRELISINKRFLEHNGLDFAMRHDWNSLLSD 276
S + LQ +H+ VIVGAGP G+Q A+YLE A RDYV++E G FFE PR R LISINKRF D+ +RHDWNSLLSD
Sbjct: 17 SLVILQFSKVQDKYHEYVIVGAGPAGVQAAYYLEKAGRDYVILEKGDKPGYFFETYPRHRTLISINKRFNYFPEDDYNLRHDWNSLLSD 105
BLAST of mRNA_M-pyrifera_M_contig110944.2298.1 vs. uniprot
Match: A0A8C5QSG7_9ANUR (FAD dependent oxidoreductase domain containing 2 n=1 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5QSG7_9ANUR) HSP 1 Score: 98.2 bits (243), Expect = 1.060e-21 Identity = 45/83 (54.22%), Postives = 59/83 (71.08%), Query Frame = 1
Query: 52 HQVVIVGAGPGGLQLAHYLESAHRDYVVIEAAGNAGSFFERNPRFRELISINKRFLEHNGLDFAMRHDWNSLLSDVSHVQVNQ 300
H ++GAGPGGLQ+A +LE A RDYVV E + GSFF R PR R+LISINK+F +F +RHDWNSLLS + H++ ++
Sbjct: 25 HDYCVLGAGPGGLQIARFLEDAGRDYVVFERSQTPGSFFLRFPRHRKLISINKQFTGSKNSEFNLRHDWNSLLSGIRHLRFSR 107
BLAST of mRNA_M-pyrifera_M_contig110944.2298.1 vs. uniprot
Match: A0A7S0JLT4_CAFRO (Hypothetical protein n=4 Tax=Sar TaxID=2698737 RepID=A0A7S0JLT4_CAFRO) HSP 1 Score: 98.2 bits (243), Expect = 1.100e-21 Identity = 47/79 (59.49%), Postives = 58/79 (73.42%), Query Frame = 1
Query: 49 FHQVVIVGAGPGGLQLAHYLESAHRDYVVIEAAGNAGSFFERNPRFRELISINKRFLEHNGLDFAMRHDWNSLLSDVSH 285
F + +VGAGP GLQ+AHYL+SA+R + +I+ G A +FF R PRF LIS+N+R E LDFAMRHDWNSLL D SH
Sbjct: 47 FRRYAVVGAGPAGLQMAHYLQSANRSFALIDGQGPA-AFFGRFPRFGTLISLNRRHPETANLDFAMRHDWNSLLGDASH 124
BLAST of mRNA_M-pyrifera_M_contig110944.2298.1 vs. uniprot
Match: UPI001069BCA8 (FAD-dependent oxidoreductase domain-containing protein 2-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI001069BCA8) HSP 1 Score: 97.4 bits (241), Expect = 1.970e-21 Identity = 44/79 (55.70%), Postives = 58/79 (73.42%), Query Frame = 1
Query: 40 MKSFHQVVIVGAGPGGLQLAHYLESAHRDYVVIEAAGNAGSFFERNPRFRELISINKRFLEHNGLDFAMRHDWNSLLSD 276
+K+ H+ +VGAGPGGLQ+A++L+ ++RDY+V E AGSF++ PR R LISINKR +F MRHDWNSLLSD
Sbjct: 59 IKTHHEYCVVGAGPGGLQIAYFLKRSNRDYIVFERNSEAGSFYKFYPRHRGLISINKRHTGKTNKEFNMRHDWNSLLSD 137
BLAST of mRNA_M-pyrifera_M_contig110944.2298.1 vs. uniprot
Match: C3Z6Y0_BRAFL (Uncharacterized protein n=2 Tax=Branchiostoma floridae TaxID=7739 RepID=C3Z6Y0_BRAFL) HSP 1 Score: 97.4 bits (241), Expect = 1.980e-21 Identity = 45/92 (48.91%), Postives = 60/92 (65.22%), Query Frame = 1
Query: 37 GMKSFHQVVIVGAGPGGLQLAHYLESAHRDYVVIEAAGNAGSFFERNPRFRELISINKRFLEHNGLDFAMRHDWNSLLSDVSHVQVNQGVKE 312
G +H +++GAGP GLQ+ YLE A RDY+++E AG+F+ + PR R+LISINKR +F MRHDWNSLLSD +Q+ KE
Sbjct: 56 GFDVYHDYLVIGAGPSGLQMGFYLERAGRDYLILERGEGAGTFYTQYPRHRKLISINKRNTGKTNKEFNMRHDWNSLLSDDDSLQLRHYSKE 147
BLAST of mRNA_M-pyrifera_M_contig110944.2298.1 vs. uniprot
Match: C3Z4N3_BRAFL (Uncharacterized protein n=3 Tax=Branchiostoma floridae TaxID=7739 RepID=C3Z4N3_BRAFL) HSP 1 Score: 97.1 bits (240), Expect = 2.600e-21 Identity = 43/88 (48.86%), Postives = 63/88 (71.59%), Query Frame = 1
Query: 49 FHQVVIVGAGPGGLQLAHYLESAHRDYVVIEAAGNAGSFFERNPRFRELISINKRFLEHNGLDFAMRHDWNSLLSDVSHVQVNQGVKE 312
+H +IVGAGP GLQL ++L+ A RDY+++E +AG+F++ PR R+LISINKR+ ++ MRHDWNSLLSD +++ Q +E
Sbjct: 49 YHDYIIVGAGPSGLQLGYFLQRAGRDYLILEKGDSAGTFYKTYPRHRKLISINKRYTGKTNKEYNMRHDWNSLLSDDETLRMTQYSEE 136 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig110944.2298.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig110944.2298.1 >prot_M-pyrifera_M_contig110944.2298.1 ID=prot_M-pyrifera_M_contig110944.2298.1|Name=mRNA_M-pyrifera_M_contig110944.2298.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=99bp MALQSVHGMKSFHQVVIVGAGPGGLQLAHYLESAHRDYVVIEAAGNAGSFback to top mRNA from alignment at M-pyrifera_M_contig110944:88..399- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig110944.2298.1 ID=mRNA_M-pyrifera_M_contig110944.2298.1|Name=mRNA_M-pyrifera_M_contig110944.2298.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=312bp|location=Sequence derived from alignment at M-pyrifera_M_contig110944:88..399- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig110944:88..399- >mRNA_M-pyrifera_M_contig110944.2298.1 ID=mRNA_M-pyrifera_M_contig110944.2298.1|Name=mRNA_M-pyrifera_M_contig110944.2298.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=594bp|location=Sequence derived from alignment at M-pyrifera_M_contig110944:88..399- (Macrocystis pyrifera P11B4 male)back to top |