mRNA_M-pyrifera_M_contig110925.2292.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig110925.2292.1 vs. uniprot
Match: A0A0G4I9D7_9ALVE (D-ser_dehydrat domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I9D7_9ALVE) HSP 1 Score: 134 bits (338), Expect = 1.200e-34 Identity = 79/183 (43.17%), Postives = 107/183 (58.47%), Query Frame = 1
Query: 1 RVMVDSLEGLRLLEEEGGEGGGVGEGGGGKWSVWVAVDAGYGREGVRKEEEAVELCA----AVSSGKRVELFGLYSHSGDAYNRGADGEGALERGKEEAAWISKIARLCRERGVEIGVVSVGSTPSASLLSSYPEEVTEIHPGNFVFYDRQQVASGSCTLSSIALAVHARILAHYPDRREILI 537
R+MVDS+ + LE E G G K ++V +D GY R G+ E ++ A+++GK E FGLY+HSG+ YN + A + EA + AR + G+ V VGSTPSA+ +S P E+TEIHPGNFVFYD QQV SGSCTL IA+ V +R+++ YP+R E LI
Sbjct: 116 RLMVDSVGAVEELETALAERGETG-----KIHLFVKLDCGYHRAGIDISEGKFDVLESVVKAIAAGKHTEFFGLYAHSGNTYNCKGGVQEAAQIADREAELSATAARYLKSLGLYPQAVGVGSTPSATAVSPLPPEITEIHPGNFVFYDLQQVDSGSCTLPDIAVGVLSRVVSVYPERNEALI 293
BLAST of mRNA_M-pyrifera_M_contig110925.2292.1 vs. uniprot
Match: A0A812QL90_9DINO (Dthadh protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812QL90_9DINO) HSP 1 Score: 131 bits (330), Expect = 2.500e-33 Identity = 73/182 (40.11%), Postives = 101/182 (55.49%), Query Frame = 1
Query: 1 RVMVDSLEGLRLLEEEGGEGGGVGEGGGGKWSVWVAVDAGYGREGVRK---EEEAVELCAAVSSGKRVELFGLYSHSGDAYNRGADGEGALERGKEEAAWISKIARLCRERGVEIGVVSVGSTPSASLLSSYPEEVTEIHPGNFVFYDRQQVASGSCTLSSIALAVHARILAHYPDRREILI 537
R+++DS EG+ E E G W V++ VD GY R GV +A+++ + + LFGLY+HSG+AYN A + EA IS A+ G+ + V VGSTPSA+ ++ P +TE+HPGNF+FYD QQV SGSC+L IA V I+ YP+R E+LI
Sbjct: 139 RLLLDSSEGVAKCGEHV-------EDGAAPWPVFLKVDCGYSRAGVSPITTPTKALQVARDIHKSPQFTLFGLYAHSGNAYNCKGGKPEAAQVAHSEAEVISDFAQALASEGISVDAVGVGSTPSAAACTALPSSITEMHPGNFLFYDLQQVDSGSCSLGDIACGVLTSIIGVYPERNEVLI 313
BLAST of mRNA_M-pyrifera_M_contig110925.2292.1 vs. uniprot
Match: A0A6A7GCH6_9CRUS (D-ser_dehydrat domain-containing protein (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7GCH6_9CRUS) HSP 1 Score: 124 bits (310), Expect = 1.470e-30 Identity = 68/151 (45.03%), Postives = 93/151 (61.59%), Query Frame = 1
Query: 91 WSVWVAVDAGYGREGVRKEEE-AVELCAAVSSGKRVELFGLYSHSGDAYNRGADGEGALER-GKEEAAWISKIARLCRERGVEIGVVSVGSTPSASLLSSYPEEVTEIHPGNFVFYDRQQVASGSCTLSSIALAVHARILAHYPDRREILI 537
+S ++ VD GY R GV E+E A L V S K + L GLYSH+G +YN+ A++R E+ I A R+ GV I + VGSTPS S+ + + +TEIHPGN++FYDRQQ G CT IA+AV +R+++HYP R +ILI
Sbjct: 150 FSCFIKVDTGYHRAGVDPEDEDAARLVLNVHSSKYITLQGLYSHNGHSYNQTPGDVSAIQRIADEDKTSIVAFADRLRKLGVTIKTIGVGSTPSCSVSEDF-DGITEIHPGNYIFYDRQQAHIGCCTEDDIAVAVLSRVISHYPSRNKILI 299
BLAST of mRNA_M-pyrifera_M_contig110925.2292.1 vs. uniprot
Match: A0A6P4XSM6_BRABE (uncharacterized protein LOC109462877 n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4XSM6_BRABE) HSP 1 Score: 123 bits (308), Expect = 2.080e-30 Identity = 70/179 (39.11%), Postives = 100/179 (55.87%), Query Frame = 1
Query: 4 VMVDSLEGLRLLEEEGGEGGGVGEGGGGKWSVWVAVDAGYGREGVRKEE-EAVELCAAVSSGKRVELFGLYSHSGDAYNRGADGEGALERGKEEAAWISKIARLCRERGVEIGVVSVGSTPSASLLSSYPEEVTEIHPGNFVFYDRQQVASGSCTLSSIALAVHARILAHYPDRREILI 537
VM+DS GL ++ G +WSV++ VD GYGR GV + E VEL +V S V+ GLY+H GD+Y+ + E G A I A ++ G+E VS+GSTP+ S + ++TE+HPGN++FYD QQ GSCTL IA+ V R++ HYP + +L+
Sbjct: 111 VMIDSSAGLDAIKST--------PLSGKQWSVFLKVDCGYGRAGVSHDSVEGVELVRSVVSTPGVQFAGLYAHCGDSYHSDSPQE-VKAVGHRTAQNILTFAARLKQEGIECPTVSIGSTPTCSQPADSMGQLTEVHPGNYIFYDVQQSLLGSCTLEDIAVQVMTRVIGHYPGKNHMLV 280
BLAST of mRNA_M-pyrifera_M_contig110925.2292.1 vs. uniprot
Match: UPI00046270FF (D-threo-3-hydroxyaspartate dehydratase n=1 Tax=Anolis carolinensis TaxID=28377 RepID=UPI00046270FF) HSP 1 Score: 121 bits (304), Expect = 5.100e-30 Identity = 69/185 (37.30%), Postives = 104/185 (56.22%), Query Frame = 1
Query: 4 VMVDSLEGL-----RLLEEEGGEGGGVGEGGGGKWSVWVAVDAGYGREGVRKEE-EAVELCAAVSSGKRVELFGLYSHSGDAYNRGADGEGALERGKEEAAWIS-KIARLCRERGVEIGVVSVGSTPSASLLSSYPEEVTEIHPGNFVFYDRQQVASGSCTLSSIALAVHARILAHYPDRREILI 537
V+VDS E L R LE EGG+ +W VW+ +D R G++ ++ AVEL A++ G EL G+Y+H G++Y G +G ++ ++ + +E GV V S+GSTPS S ++TE+HPGN++FYD QQ+ GSC L IA+ V R++ HYPDR ++L+
Sbjct: 82 VLVDSAEALAQLEQRPLETEGGK----------RWKVWLKIDCDNHRAGLKHDDPSAVELAKAIAEGATTELAGVYAHCGNSY--GCNGVPDIQSVARTTTQLTLQFMEKLKEAGVACDVSSIGSTPSCSHPVPEMAKLTEVHPGNYIFYDVQQMMIGSCQLEDIAVRVLTRVIGHYPDRNQLLV 254
BLAST of mRNA_M-pyrifera_M_contig110925.2292.1 vs. uniprot
Match: UPI0016034619 (D-threo-3-hydroxyaspartate dehydratase-like n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI0016034619) HSP 1 Score: 118 bits (295), Expect = 1.610e-28 Identity = 67/179 (37.43%), Postives = 96/179 (53.63%), Query Frame = 1
Query: 4 VMVDSLEGLRLLEEEGGEGGGVGEGGGGKWSVWVAVDAGYGREGVRKEE-EAVELCAAVSSGKRVELFGLYSHSGDAYNRGADGEGALERGKEEAAWISKIARLCRERGVEIGVVSVGSTPSASLLSSYPEEVTEIHPGNFVFYDRQQVASGSCTLSSIALAVHARILAHYPDRREILI 537
VM+DS GL + G +WSV++ VD GYGR GV + + V+L + S V+ GLY+H GD+YN + E G A I A ++ G+E VS+GSTP+ S + ++TE+HPGN++FYD QQ GSC L IA+ V R++ HYP +L+
Sbjct: 111 VMIDSTSGLDAISSR--------RVPGKQWSVFIKVDCGYGRAGVSHDSADGVQLVQYLVSTPGVKFAGLYAHCGDSYNADSPEE-VKAIGHRTAQNILAFAAKLKKEGIECPTVSIGSTPTCSQPADTMAQLTEVHPGNYIFYDVQQSLLGSCQLEDIAVQVMTRVIGHYPVNNHLLV 280
BLAST of mRNA_M-pyrifera_M_contig110925.2292.1 vs. uniprot
Match: UPI001CFB557B (D-threo-3-hydroxyaspartate dehydratase-like isoform X1 n=2 Tax=Protopterus annectens TaxID=7888 RepID=UPI001CFB557B) HSP 1 Score: 117 bits (292), Expect = 4.320e-28 Identity = 63/151 (41.72%), Postives = 94/151 (62.25%), Query Frame = 1
Query: 91 WSVWVAVDAGYGREGVRKEE-EAVELCAAVSSGKRVELFGLYSHSGDAY-NRGADGEGALERGKEEAAWISKIARLCRERGVEIGVVSVGSTPSASLLSSYPEEVTEIHPGNFVFYDRQQVASGSCTLSSIALAVHARILAHYPDRREILI 537
W VW+ VD G GR GVR E+ E++EL ++ + VEL G+Y+H G+ Y ++G A+ + + + RL +E GV+ S+GSTPS S + ++TE+HPGN+VFYD QQ+ GSCT+ +A+ V R++ HYP R E+LI
Sbjct: 131 WLVWLKVDCGNGRAGVRSEDPESMELAKNITLTEGVELVGVYAHCGNNYYSKGVQEIQAVAKATTNVI-LDFVDRL-KEAGVKCPNSSIGSTPSCSHPVAEMAKLTEVHPGNYVFYDAQQMGIGSCTMEDVAVRVLTRVVGHYPHRNELLI 279
BLAST of mRNA_M-pyrifera_M_contig110925.2292.1 vs. uniprot
Match: A0A8J9ZP95_BRALA (Hypp1855 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9ZP95_BRALA) HSP 1 Score: 115 bits (288), Expect = 1.670e-27 Identity = 70/184 (38.04%), Postives = 97/184 (52.72%), Query Frame = 1
Query: 4 VMVDSLEGL-----RLLEEEGGEGGGVGEGGGGKWSVWVAVDAGYGREGVRKEE-EAVELCAAVSSGKRVELFGLYSHSGDAYNRGADGEGALERGKEEAAWISKIARLCRERGVEIGVVSVGSTPSASLLSSYPEEVTEIHPGNFVFYDRQQVASGSCTLSSIALAVHARILAHYPDRREILI 537
VM+DS GL R L + +WSV++ VD GYGR GV + + VEL ++ S V+ GLY+H G++YN + E G A I A ++ GVE VS+GSTP+ S + ++TEIHPGN++FYD QQ GSC L IA V R++ HYP +L+
Sbjct: 111 VMIDSSSGLDAISSRPLSRK-------------QWSVFLKVDCGYGRAGVSHDSADGVELVKSLVSTPGVKFAGLYAHCGNSYNSDSP-EDVKAVGHRTAQNILAFAERLKQEGVESPTVSIGSTPTCSQPADSMGQLTEIHPGNYIFYDVQQSLLGSCKLEDIAGRVMTRVIGHYPQNGHLLV 280
BLAST of mRNA_M-pyrifera_M_contig110925.2292.1 vs. uniprot
Match: A0A6P7XPZ5_9AMPH (uncharacterized protein LOC115465980 n=2 Tax=Gymnophiona TaxID=8445 RepID=A0A6P7XPZ5_9AMPH) HSP 1 Score: 114 bits (286), Expect = 3.190e-27 Identity = 68/181 (37.57%), Postives = 101/181 (55.80%), Query Frame = 1
Query: 1 RVMVDSLEGLRLLEEEGGEGGGVGEGGGGKWSVWVAVDAGYGREGVRKEE-EAVELCAAVSSGKRVELFGLYSHSGDAYN-RGADGEGALERGKEEAAWISKIARLCRERGVEIGVVSVGSTPSASLLSSYPEEVTEIHPGNFVFYDRQQVASGSCTLSSIALAVHARILAHYPDRREILI 537
+V+VD+ E L L + GGG W VW+ VD GR GVR + EA+EL AV+ + VEL G+Y+H G+ Y RG A+ + E + + ++ GV+ S+GSTPS S ++ E+HPGN++FYD QQ+ GSC + IA+ V R++ HYP R ++L+
Sbjct: 108 QVLVDNQEALEQLRKRK-------LGGGKHWLVWLKVDCENGRAGVRHTDPEALELAKAVARMEEVELVGVYAHCGNTYGCRGMQEIQAVAQ--ETTTTVLQFMDKLQKAGVQCPKSSIGSTPSCSHPVPDMGKLNEVHPGNYIFYDAQQMVLGSCKMEDIAVRVLTRVIGHYPYRNQLLV 279
BLAST of mRNA_M-pyrifera_M_contig110925.2292.1 vs. uniprot
Match: UPI00074FF924 (D-threo-3-hydroxyaspartate dehydratase-like n=1 Tax=Gekko japonicus TaxID=146911 RepID=UPI00074FF924) HSP 1 Score: 114 bits (284), Expect = 6.130e-27 Identity = 68/180 (37.78%), Postives = 99/180 (55.00%), Query Frame = 1
Query: 4 VMVDSLEGLRLLEEEGGEGGGVGEGGGGKWSVWVAVDAGYGREGVRKEEEA-VELCAAVSSGKRVELFGLYSHSGDAYNRGADGEGALER-GKEEAAWISKIARLCRERGVEIGVVSVGSTPSASLLSSYPEEVTEIHPGNFVFYDRQQVASGSCTLSSIALAVHARILAHYPDRREILI 537
V+VDS E L LL+ GG W VW+ VD GR G+R + A +EL A+++G EL G+Y+H G++Y+ G ++ + + + RE GV V S+GSTPS S E+ E+HPGN++FYD QQ+ GSC L IA+ V R++ HYP R ++L+
Sbjct: 109 VLVDSPEALALLKRRPLHGGK-------HWKVWLKVDCENGRAGLRHADPAALELAQAIAAGP-TELAGVYAHCGNSYH--CQGVPEIQTVARTTTKQVLEFTEKLREEGVPCPVASIGSTPSCSHPVPEMAELQEVHPGNYIFYDVQQMMIGSCQLKDIAVRVLTRVIGHYPHRNQMLV 278 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig110925.2292.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig110925.2292.1 >prot_M-pyrifera_M_contig110925.2292.1 ID=prot_M-pyrifera_M_contig110925.2292.1|Name=mRNA_M-pyrifera_M_contig110925.2292.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=177bp MVDSLEGLRLLEEEGGEGGGVGEGGGGKWSVWVAVDAGYGREGVRKEEEAback to top mRNA from alignment at M-pyrifera_M_contig110925:58..594+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig110925.2292.1 ID=mRNA_M-pyrifera_M_contig110925.2292.1|Name=mRNA_M-pyrifera_M_contig110925.2292.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=537bp|location=Sequence derived from alignment at M-pyrifera_M_contig110925:58..594+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig110925:58..594+ >mRNA_M-pyrifera_M_contig110925.2292.1 ID=mRNA_M-pyrifera_M_contig110925.2292.1|Name=mRNA_M-pyrifera_M_contig110925.2292.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1062bp|location=Sequence derived from alignment at M-pyrifera_M_contig110925:58..594+ (Macrocystis pyrifera P11B4 male)back to top |