mRNA_M-pyrifera_M_contig110816.2278.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig110816.2278.1 vs. uniprot
Match: A0A813BUM3_9DINO (GAMMACA1 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813BUM3_9DINO) HSP 1 Score: 169 bits (427), Expect = 4.310e-49 Identity = 98/180 (54.44%), Postives = 130/180 (72.22%), Query Frame = 1
Query: 1 SRHRPLMSLYTKHPYAEVDSFVAPSASVVGDVTVGPQASVWYGAVVRGDVAPVVVGAFASIGDRAVLHGARGAQGG----VRVGEYARIGAGASLHACVVEHHACVGAGAVVMEGAVXXXXXXXXXXXXXHPNRRVPKGEVWGGNPAVFLRPVSKEDMAASEEEAETTARLAQEHKHEFL 528
SRHR +M+LY HP VD+FVAP+ASVVG+V +G +ASVWYGAV+RGD+ + + FAS+GDRAV+H ++ +G V++G +A IG GA + + ++E+HA VGA +MEGAV XXXXXXX P RRVPKG++WGGNPAVF+R ++K +MA +AE A LA EHK EFL
Sbjct: 27 SRHRAVMNLYEHHPDVSVDAFVAPNASVVGNVFIGMRASVWYGAVLRGDMNHIQIAPFASVGDRAVIHTSKSVEGKPAAVVKIGSHAVIGPGALIQSAIIENHAVVGAXXXIMEGAVVEEYARXXXXXXXXPGRRVPKGQLWGGNPAVFVRNLTKTEMAHHAVDAEAGADLAAEHKAEFL 206
BLAST of mRNA_M-pyrifera_M_contig110816.2278.1 vs. uniprot
Match: A0A7S1CBV1_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CBV1_9STRA) HSP 1 Score: 158 bits (399), Expect = 5.060e-45 Identity = 97/180 (53.89%), Postives = 129/180 (71.67%), Query Frame = 1
Query: 1 SRHRPLMSLYTKHPYAEVDSFVAPSASVVGDVTVGPQASVWYGAVVRGDVAPVVVGAFASIGDRAVLHGARGAQGG----VRVGEYARIGAGASLHACVVEHHACVGAGAVVMEGAVXXXXXXXXXXXXXHPNRRVPKGEVWGGNPAVFLRPVSKEDMAASEEEAETTARLAQEHKHEFL 528
+RHRP+ +LY KHP E + FVAPSA+V+G V + ++SVWYGAVVRGDV V +G ++SIGDRAV+ + +G R+G+Y +G GA L +C +E+ +GAGAVVMEGA+ XXXXXXXXXXXX RR+P G++W GNPA F+R ++KE++A E +AE A L EH HEFL
Sbjct: 57 ARHRPVQNLYEKHPEVENNVFVAPSATVIGHVQILHKSSVWYGAVVRGDVNAVEIGGYSSIGDRAVVSTTKSVEGRPAATCRIGDYVTVGPGALLQSCTIENGVKIGAGAVVMEGALVXXXXXXXXXXXXXXGRRIPSGQLWAGNPAQFVRNLTKEELATFEGDAEFVADLGGEHAHEFL 236
BLAST of mRNA_M-pyrifera_M_contig110816.2278.1 vs. uniprot
Match: A0A5A8CT95_CAFRO (Uncharacterized protein n=3 Tax=Sar TaxID=2698737 RepID=A0A5A8CT95_CAFRO) HSP 1 Score: 154 bits (388), Expect = 1.240e-43 Identity = 98/180 (54.44%), Postives = 133/180 (73.89%), Query Frame = 1
Query: 1 SRHRPLMSLYTKHPYAEVDSFVAPSASVVGDVTVGPQASVWYGAVVRGDVAPVVVGAFASIGDRAVLHGARGAQG---GV-RVGEYARIGAGASLHACVVEHHACVGAGAVVMEGAVXXXXXXXXXXXXXHPNRRVPKGEVWGGNPAVFLRPVSKEDMAASEEEAETTARLAQEHKHEFL 528
+RHRP+M+L+ KHP + FVAP+A+VVG+VT+ +++VWYGAVVRGD A V +G + +I DRAV+ A+ +G GV ++G + + GA L +CVVE H +GAGAVV +G XXXXXXXXXXXXXHP RR+P G++W GNPA F+R ++KE+MAA E +AE + LA+EH EFL
Sbjct: 38 ARHRPVMNLFDKHPVTDPSVFVAPNATVVGNVTIAHKSNVWYGAVVRGDQARVEIGGYTNIQDRAVVTTAKEVEGQSSGVTKIGSHVTVCPGAVLRSCVVEGHNRIGAGAVVNDGXXXXXXXXXXXXXXXHPGRRIPGGQLWAGNPAEFVRNLTKEEMAALEIDAEAASSLAEEHAAEFL 217
BLAST of mRNA_M-pyrifera_M_contig110816.2278.1 vs. uniprot
Match: A0A482RAX9_9ARCH (Gamma carbonic anhydrase family protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RAX9_9ARCH) HSP 1 Score: 151 bits (381), Expect = 1.250e-42 Identity = 93/162 (57.41%), Postives = 122/162 (75.31%), Query Frame = 1
Query: 55 DSFVAPSASVVGDVTVGPQASVWYGAVVRGDVAPVVVGAFASIGDRAVLHGARGAQG----GVRVGEYARIGAGASLHACVVEHHACVGAGAVVMEGAVXXXXXXXXXXXXXHPNRRVPKGEVWGGNPAVFLRPVSKEDMAASEEEAETTARLAQEHKHEFL 528
D+FVAP+A+V+G VT+ +++V YGAVVRGD+ V VGA+ +IGDRAV+ + +G GVR+G + IG GA L +C VE A +GAGA+VMEGA+XXXXXXXXXXXXXHP RR+P GE+W GNPAVF+RP++K ++A + AE A +A EH HEFL
Sbjct: 4 DAFVAPNAAVIGSVTINTRSAVMYGAVVRGDLNEVEVGAYTTIGDRAVISTTKSVEGHVSAGVRIGNHVSIGPGALLQSCTVEDAAVIGAGAIVMEGALXXXXXXXXXXXXXHPGRRIPSGELWAGNPAVFVRPLTKMELAGATGHAEEAADVASEHAHEFL 165
BLAST of mRNA_M-pyrifera_M_contig110816.2278.1 vs. uniprot
Match: A0A8J5XCB5_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XCB5_DIALT) HSP 1 Score: 147 bits (372), Expect = 2.920e-41 Identity = 94/180 (52.22%), Postives = 121/180 (67.22%), Query Frame = 1
Query: 1 SRHRPLMSLYTKHPYAEVDSFVAPSASVVGDVTVGPQASVWYGAVVRGDVAPVVVGAFASIGDRAVLHGARGAQGGVR----VGEYARIGAGASLHACVVEHHACVGAGAVVMEGAVXXXXXXXXXXXXXHPNRRVPKGEVWGGNPAVFLRPVSKEDMAASEEEAETTARLAQEHKHEFL 528
SRHR +M+LY K P D FVAPSASV+GDV + SVWYGAVVR DV PV +G + +I +RAV+H A G + +G + +G GA L AC VE + +GAG+V++EG XXXXXXXXXXXXX RVP GE+WGGNP F+R +SKE+ A E++A A A+EH+ +FL
Sbjct: 38 SRHRAVMNLYEKRPSMAADVFVAPSASVIGDVILNDGVSVWYGAVVRSDVNPVTIGGYTNIQERAVVHAATSTPTGFKANCSIGSWVSVGQGAVLRACTVEDYCVIGAGSVLLEGXXXXXXXXXXXXXXXXXXXRVPSGEMWGGNPIAFVRKLSKEEAADIEKQANAVADAAKEHQEQFL 217
BLAST of mRNA_M-pyrifera_M_contig110816.2278.1 vs. uniprot
Match: A0A7I8KKY4_SPIIN (Hypothetical protein n=1 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8KKY4_SPIIN) HSP 1 Score: 139 bits (349), Expect = 2.710e-37 Identity = 79/184 (42.93%), Postives = 113/184 (61.41%), Query Frame = 1
Query: 1 SRHRPLMSLYTKHPYAEVDSFVAPSASVVGDVTVGPQASVWYGAVVRGDVAPVVVGAFASIGDRAVLHGARGAQGG----VRVGEYARIGAGASLHACVVEHHACVGAGAVVMEGAVXXXXXXXXXXXXXHPNRRVPKGEVWGGNPAVFLRPVSKEDMAASEEEAETTARLAQEHKHEFLEGAE 540
SRHR LM+++ K P + ++FVAPSASV+GDV VG +S+WYG V+RGDV + VG+ +I D +++H A+ G +G+ +G GA+LH C+VE A VG GAV+++G V N R+P GEVWGGNPA FLR +++E++A + A LAQ H E ++G E
Sbjct: 40 SRHRTLMNIFDKVPNVDKEAFVAPSASVIGDVQVGRGSSIWYGCVLRGDVNSIRVGSGTNIQDNSLVHVAKSNLAGKVLPTIIGDNVTVGHGATLHGCIVEDEAFVGMGAVLLDGVVVEKNGMVAAGALVRQNTRIPTGEVWGGNPARFLRRLTEEELAFIAQSAANYGNLAQVHAAENVKGFE 223
BLAST of mRNA_M-pyrifera_M_contig110816.2278.1 vs. uniprot
Match: A0A7N0RBJ5_KALFE (Uncharacterized protein n=2 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0RBJ5_KALFE) HSP 1 Score: 136 bits (343), Expect = 2.080e-36 Identity = 79/184 (42.93%), Postives = 108/184 (58.70%), Query Frame = 1
Query: 1 SRHRPLMSLYTKHPYAEVDSFVAPSASVVGDVTVGPQASVWYGAVVRGDVAPVVVGAFASIGDRAVLHGARGAQGG----VRVGEYARIGAGASLHACVVEHHACVGAGAVVMEGAVXXXXXXXXXXXXXHPNRRVPKGEVWGGNPAVFLRPVSKEDMAASEEEAETTARLAQEHKHEFLEGAE 540
SRHR LM+++ K P + D+FVAPSAS+VGDV VG +S+WYG VVRGDV V +G+ +I D +++H A+ G +G+ +G A LH C VE A +G GA +++G N R+P GEVWGGNPA FLR +++E+MA + A A LAQ H E +G E
Sbjct: 40 SRHRALMNIFDKAPVVDKDAFVAPSASIVGDVQVGRGSSIWYGCVVRGDVNSVSIGSGTNIQDNSLVHVAKSNLSGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFIGMGATLLDGVFVEKHSMVAAGALVRQNTRIPCGEVWGGNPAKFLRKLTEEEMAFITQSATNYANLAQVHAAENAKGLE 223
BLAST of mRNA_M-pyrifera_M_contig110816.2278.1 vs. uniprot
Match: A0A218X8Z4_PUNGR (gamma carbonic anhydrase 1, mitochondrial n=36 Tax=Magnoliopsida TaxID=3398 RepID=A0A218X8Z4_PUNGR) HSP 1 Score: 136 bits (342), Expect = 2.660e-36 Identity = 77/178 (43.26%), Postives = 106/178 (59.55%), Query Frame = 1
Query: 1 SRHRPLMSLYTKHPYAEVDSFVAPSASVVGDVTVGPQASVWYGAVVRGDVAPVVVGAFASIGDRAVLHGARGAQGG----VRVGEYARIGAGASLHACVVEHHACVGAGAVVMEGAVXXXXXXXXXXXXXHPNRRVPKGEVWGGNPAVFLRPVSKEDMAASEEEAETTARLAQEHKHE 522
SRHR LM+++ K P + D+FVAPSAS++GDV VG +SVWYG V+RGDV + VG+ +I D +++H A+ G +G+ +G A LH C VE A VG GA++++G V N R+P GEVWGGNPA FLR ++ E++A + A A LAQ H E
Sbjct: 40 SRHRTLMNVFDKAPVVDKDAFVAPSASIIGDVQVGRGSSVWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGAILLDGVVVEKHAMVAAGALVRQNTRIPAGEVWGGNPAKFLRKLTDEEIAFISQSATNYANLAQVHASE 217
BLAST of mRNA_M-pyrifera_M_contig110816.2278.1 vs. uniprot
Match: A0A5A7QVV9_STRAF (GAMMA carbonic anhydrase n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7QVV9_STRAF) HSP 1 Score: 135 bits (341), Expect = 3.310e-36 Identity = 76/178 (42.70%), Postives = 105/178 (58.99%), Query Frame = 1
Query: 1 SRHRPLMSLYTKHPYAEVDSFVAPSASVVGDVTVGPQASVWYGAVVRGDVAPVVVGAFASIGDRAVLHGARGAQGG----VRVGEYARIGAGASLHACVVEHHACVGAGAVVMEGAVXXXXXXXXXXXXXHPNRRVPKGEVWGGNPAVFLRPVSKEDMAASEEEAETTARLAQEHKHE 522
SRHR LM+L K P + ++FVAPSAS+VGDV VGP +S+WYG V+RGD + +G +I D +++H A+ GG + +G+ +G A LH C VE A VG GA +++G V N R+P GEVWGGNPA FLR ++ +++A + A A LAQ H E
Sbjct: 40 SRHRTLMNLCDKVPVVDKNAFVAPSASIVGDVYVGPSSSIWYGCVLRGDANSISIGTKTNIQDNSLVHVAKSNLGGKVLPILIGDNVTVGHSAILHGCTVEDEAFVGMGATLLDGVVVEKHAMVAAGALVRQNTRIPSGEVWGGNPAKFLRKLTDDEIAFISQSATNYASLAQAHASE 217
BLAST of mRNA_M-pyrifera_M_contig110816.2278.1 vs. uniprot
Match: A0A804J202_MUSAM (Uncharacterized protein n=3 Tax=Musa acuminata subsp. malaccensis TaxID=214687 RepID=A0A804J202_MUSAM) HSP 1 Score: 135 bits (340), Expect = 5.990e-36 Identity = 79/178 (44.38%), Postives = 106/178 (59.55%), Query Frame = 1
Query: 1 SRHRPLMSLYTKHPYAEVDSFVAPSASVVGDVTVGPQASVWYGAVVRGDVAPVVVGAFASIGDRAVLHGARGAQGG----VRVGEYARIGAGASLHACVVEHHACVGAGAVVMEGAVXXXXXXXXXXXXXHPNRRVPKGEVWGGNPAVFLRPVSKEDMAASEEEAETTARLAQEHKHE 522
SRHR LM+++ K P D+FVAPSASV+GDV VG +S+WYG V+RGDV + +G+ +I D +++H A+ G +G+ +G A LH C VE A VG GAV+++GAV N R+P GEVWGGNPA FLR ++ E++A E A A LAQ H E
Sbjct: 40 SRHRTLMNIFDKVPNVHKDAFVAPSASVIGDVHVGQGSSIWYGCVLRGDVNSIHIGSGTNIQDNSLVHVAKSNLSGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGAVLLDGAVVEKHGMVAAGALVRQNTRIPCGEVWGGNPAKFLRKLTDEEVAFISESAANYANLAQVHAAE 217 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig110816.2278.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig110816.2278.1 >prot_M-pyrifera_M_contig110816.2278.1 ID=prot_M-pyrifera_M_contig110816.2278.1|Name=mRNA_M-pyrifera_M_contig110816.2278.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=179bp MSLYTKHPYAEVDSFVAPSASVVGDVTVGPQASVWYGAVVRGDVAPVVVGback to top mRNA from alignment at M-pyrifera_M_contig110816:5..559+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig110816.2278.1 ID=mRNA_M-pyrifera_M_contig110816.2278.1|Name=mRNA_M-pyrifera_M_contig110816.2278.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=555bp|location=Sequence derived from alignment at M-pyrifera_M_contig110816:5..559+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig110816:5..559+ >mRNA_M-pyrifera_M_contig110816.2278.1 ID=mRNA_M-pyrifera_M_contig110816.2278.1|Name=mRNA_M-pyrifera_M_contig110816.2278.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1074bp|location=Sequence derived from alignment at M-pyrifera_M_contig110816:5..559+ (Macrocystis pyrifera P11B4 male)back to top |