mRNA_M-pyrifera_M_contig110785.2268.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig110785.2268.1 vs. uniprot
Match: A0A1S3IRH9_LINUN (Ubiquitin-like domain-containing CTD phosphatase 1 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3IRH9_LINUN) HSP 1 Score: 75.1 bits (183), Expect = 3.260e-13 Identity = 56/149 (37.58%), Postives = 86/149 (57.72%), Query Frame = 1
Query: 4 ESRTFSLPSTTPVRELKRSVEEAFGVPIEGQKLVGLKVPKGAEGDDTALSRTKIAK--KVILMGSKVSEKLEVLAEDDPLLDALENDLEKGGEGGDEESGGKDMEIALGRVDDRVERVEVEMMDGFREGVQGTLVLDNDYTLFDHKSPG 444
E + L + V +LK ++ +A GV E QKL+GLK GDD LS K+ K+++MG++ ++VL + + + + ND + G E EE KD E L +V+ R++ +VE+++ REG + LVLD DYTLFDH+S G
Sbjct: 14 EYKITDLDDSDTVADLKNAISKATGVLPERQKLLGLKYKGSVPGDDVQLSSLKLKPNTKIMMMGTREESLVDVLEPPEDIPNVV-NDFDVGEE---EEIEVKDREEYLNKVEKRIKSYKVEVINEPREGKK-LLVLDVDYTLFDHRSVG 157
BLAST of mRNA_M-pyrifera_M_contig110785.2268.1 vs. uniprot
Match: K1PP44_CRAGI (Ubiquitin-like domain-containing CTD phosphatase 1 n=2 Tax=Crassostrea gigas TaxID=29159 RepID=K1PP44_CRAGI) HSP 1 Score: 68.6 bits (166), Expect = 8.350e-11 Identity = 52/143 (36.36%), Postives = 84/143 (58.74%), Query Frame = 1
Query: 16 FSLPSTTPVRELKRSVEEAFGVPIEGQKLVGLKVPKGAEGDDTALSRTKI--AKKVILMGSKVSEKLEVLAEDDPLLDALENDLEKGGEGGDEESGGKDMEIALGRVDDRVERVEVEMMDGFREGVQGTLVLDNDYTLFDHKS 438
SLP V +LK++ + A GV E QKL+GLK GDD AL+ K+ + K+++MGS+ E+L+ + E L + ND + +EE ++ E L +++ R++ ++ +++ REG + LVLD DYTLFDH+S
Sbjct: 21 LSLPKDATVGDLKKATQAATGVLPERQKLLGLKFKGKPPGDDVALTDMKLKPSTKIMMMGSR-EEELDKVKEVPKDLPEVVNDFDIE----EEEIAIENREEYLAKIERRIKEYKINVLNEPREGKK-LLVLDIDYTLFDHRS 157
BLAST of mRNA_M-pyrifera_M_contig110785.2268.1 vs. uniprot
Match: A0A0K2SYW8_LEPSM (Ubiquitin-like domain-containing CTD phosphatase 1 n=1 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=A0A0K2SYW8_LEPSM) HSP 1 Score: 67.4 bits (163), Expect = 1.980e-10 Identity = 55/151 (36.42%), Postives = 84/151 (55.63%), Query Frame = 1
Query: 1 KESRTFSLPSTTPVRELKRSVEEAFGVPIEGQKLVGLKVPKGAEGDDTALSR--TKIAKKVILMGS--KVSEKLEVLAEDDPLLDALENDLEKGGEGGDEESGGKDMEIALGRVDDRVERVEVEMMDGFREGVQGTLVLDNDYTLFDHKSP 441
KE R L T V +LK+ ++E V E QKL+ +K+ A GDD LS TK K+++MGS K E++ +D P + +NDL+ +G EE+ ++ L ++ R++ E+ + + R G + LVLD DYTLFDH+SP
Sbjct: 13 KEYRIEDLNENTSVLQLKKLIQERTEVRPERQKLLNMKLNGKAPGDDILLSTLPTKNGAKIMMMGSLEKDIAATEIVPDDLPYV---KNDLDDHDDG--EETSIENRSEYLTKIQHRIDNCEIHLRNELRPGKK-LLVLDIDYTLFDHRSP 157
BLAST of mRNA_M-pyrifera_M_contig110785.2268.1 vs. uniprot
Match: C1BRQ0_CALRO (Ubiquitin-like domain-containing CTD phosphatase 1 n=1 Tax=Caligus rogercresseyi TaxID=217165 RepID=C1BRQ0_CALRO) HSP 1 Score: 64.3 bits (155), Expect = 1.760e-9 Identity = 54/150 (36.00%), Postives = 80/150 (53.33%), Query Frame = 1
Query: 1 KESRTFSLPSTTPVRELKRSVEEAFGVPIEGQKLVGLKVPKGAEGDDTALSR--TKIAKKVILMGSKVSEKLEVLAEDDPLLDALENDLEKGGEGGDEESGGKDMEIALGRVDDRVERVEVEMMDGFREGVQGTLVLDNDYTLFDHKSPG 444
KE R + T V +LK+ ++E V E QKL+ LK+ GD+ LS TK K+++MGS + L L L + NDL+ DEE+ + L +V R+E+ ++++ + FR G + LVLD DYTLFDH+S G
Sbjct: 11 KEYRIEGISGETSVLQLKQLIQEQTEVRPERQKLLNLKLNGKPPGDEILLSSLPTKNGAKIMMMGSLEKDILASLTPPSN-LPYVRNDLDDT----DEETAVEFRPENLAKVQHRIEKCDIQIRNAFRPGKK-LLVLDIDYTLFDHRSTG 154
BLAST of mRNA_M-pyrifera_M_contig110785.2268.1 vs. uniprot
Match: A0A5J5D246_9PERO (Ubiquitin-like domain-containing CTD phosphatase 1 n=2 Tax=Percomorphaceae TaxID=1489872 RepID=A0A5J5D246_9PERO) HSP 1 Score: 63.5 bits (153), Expect = 5.270e-9 Identity = 56/142 (39.44%), Postives = 78/142 (54.93%), Query Frame = 1
Query: 19 SLPSTTPVRELKRSVEEAFGVPIEGQKLVGLKVPKGAEGDDTALSRTKIAK--KVILMGSKVSEKLEVLAEDDPLLDALENDLEKGGEGGDEESGGKDMEIALGRVDDRVERVEVEMMDGFREGVQGTLVLDNDYTLFDHKS 438
SL V +LK+S++ GV E QKL+GLKV D+ L K+ K+++MG++ EVLA P D + ND + DE ++ E L ++ RV+ +VE M+ REG +G LVLD DYTLFDHKS
Sbjct: 18 SLSEEDTVMDLKQSIKTLTGVLPERQKLLGLKVKGKPAEDEVKLGSLKLKPNTKIMMMGTREESLEEVLAPP-PENDDVVNDFDIE----DEVIEVENREENLAKIARRVKDYKVEEMNPPREG-KGLLVLDVDYTLFDHKS 153
BLAST of mRNA_M-pyrifera_M_contig110785.2268.1 vs. uniprot
Match: A0A6I9MY65_9TELE (Ubiquitin-like domain-containing CTD phosphatase 1 n=8 Tax=Percomorphaceae TaxID=1489872 RepID=A0A6I9MY65_9TELE) HSP 1 Score: 62.8 bits (151), Expect = 9.530e-9 Identity = 56/142 (39.44%), Postives = 78/142 (54.93%), Query Frame = 1
Query: 19 SLPSTTPVRELKRSVEEAFGVPIEGQKLVGLKVPKGAEGDDTALSRTKIAK--KVILMGSKVSEKLEVLAEDDPLLDALENDLEKGGEGGDEESGGKDMEIALGRVDDRVERVEVEMMDGFREGVQGTLVLDNDYTLFDHKS 438
SL V +LK+S++ GV E QKL+GLKV D+ L K+ K+++MG++ EVLA P D + ND + E + E+ E L ++ RV+ +VE M+ REG +G LVLD DYTLFDHKS
Sbjct: 39 SLSEEDTVMDLKQSIKSLTGVLPERQKLLGLKVKGKPAEDEVKLGSLKLKPNTKIMMMGTREESLEEVLAPP-PENDDVVNDFDIEEEVIEVEN----REENLAKIARRVKDYKVEEMNPPREG-KGLLVLDVDYTLFDHKS 174
BLAST of mRNA_M-pyrifera_M_contig110785.2268.1 vs. uniprot
Match: A0A8C9X4X6_SANLU (Ubiquitin-like domain-containing CTD phosphatase 1 n=2 Tax=Perciformes TaxID=8111 RepID=A0A8C9X4X6_SANLU) HSP 1 Score: 62.4 bits (150), Expect = 9.870e-9 Identity = 56/142 (39.44%), Postives = 78/142 (54.93%), Query Frame = 1
Query: 19 SLPSTTPVRELKRSVEEAFGVPIEGQKLVGLKVPKGAEGDDTALSRTKIAK--KVILMGSKVSEKLEVLAEDDPLLDALENDLEKGGEGGDEESGGKDMEIALGRVDDRVERVEVEMMDGFREGVQGTLVLDNDYTLFDHKS 438
SL V +LK+S++ GV E QKL+GLKV D+ L K+ K+++MG++ EVLA P D + ND + E + E+ E L ++ RV+ +VE M+ REG +G LVLD DYTLFDHKS
Sbjct: 18 SLSEEDTVMDLKQSIKTLTGVLPERQKLLGLKVKGKPAEDEVKLGSLKLKPNTKIMMMGTREESLEEVLAPP-PENDDVVNDFDIEEEVIEVEN----REENLAKIARRVKDYKVEEMNPPREG-KGLLVLDVDYTLFDHKS 153
BLAST of mRNA_M-pyrifera_M_contig110785.2268.1 vs. uniprot
Match: A0A8B8EXA5_CRAVI (Ubiquitin-like domain-containing CTD phosphatase 1 n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8EXA5_CRAVI) HSP 1 Score: 62.4 bits (150), Expect = 1.280e-8 Identity = 46/135 (34.07%), Postives = 82/135 (60.74%), Query Frame = 1
Query: 40 VRELKRSVEEAFGVPIEGQKLVGLKVPKGAEGDDTALS--RTKIAKKVILMGSKVSEKLEVLAEDDPLLDALENDLEKGGEGGDEESGGKDMEIALGRVDDRVERVEVEMMDGFREGVQGTLVLDNDYTLFDHKS 438
V LK+++++A GV E QKL+GLK GD+ AL+ + K + K+++MG++ E+L+ + E L + ND + ++E ++ E L +++ R++ ++ +++ REG + LVLD DYTLFDH+S
Sbjct: 29 VENLKKAIQDATGVLPERQKLLGLKFKGKPPGDEVALTDLKLKASTKIMMMGTR-EEELDKVKEAPKDLPEVVNDFDIE----EDEIAIENREEYLAKIERRIKEYKISVLNEPREGKK-LLVLDIDYTLFDHRS 157
BLAST of mRNA_M-pyrifera_M_contig110785.2268.1 vs. uniprot
Match: A0A6J8CPU2_MYTCO (Ubiquitin-like domain-containing CTD phosphatase 1 n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8CPU2_MYTCO) HSP 1 Score: 61.6 bits (148), Expect = 2.370e-8 Identity = 50/136 (36.76%), Postives = 80/136 (58.82%), Query Frame = 1
Query: 40 VRELKRSVEEAFGVPIEGQKLVGLKVPKGAEGDDTAL---SRTKIAKKVILMGSKVSEKLEVLAEDDPLLDALENDLEKGGEGGDEESGGKDMEIALGRVDDRVERVEVEMMDGFREGVQGTLVLDNDYTLFDHKS 438
V +LK+ ++ GV E QK++G+K KG DDT L + K K+++MG++ E+L+ + E P L + ND + +EE ++ E L ++D RV+ ++E+M+ R G + LVLD DYTLFDH+S
Sbjct: 30 VLDLKKEIKNVTGVLPERQKIMGMKF-KGKPPDDTVLLTDMKLKPNTKLMMMGTR-EEELDKVKEPPPDLPEVINDFDIE----EEEIAIENREEYLAKIDKRVKEYKIEVMNEPRPGKK-LLVLDIDYTLFDHRS 158
BLAST of mRNA_M-pyrifera_M_contig110785.2268.1 vs. uniprot
Match: A0A210Q9C6_MIZYE (Ubiquitin-like domain-containing CTD phosphatase 1 n=2 Tax=Pectinidae TaxID=6566 RepID=A0A210Q9C6_MIZYE) HSP 1 Score: 61.6 bits (148), Expect = 2.420e-8 Identity = 48/143 (33.57%), Postives = 80/143 (55.94%), Query Frame = 1
Query: 16 FSLPSTTPVRELKRSVEEAFGVPIEGQKLVGLKVPKGAEGDDTALSRTKIAK--KVILMGSKVSEKLEVLAEDDPLLDALENDLEKGGEGGDEESGGKDMEIALGRVDDRVERVEVEMMDGFREGVQGTLVLDNDYTLFDHKS 438
+L ++ V +K ++ + GV E QKL+GLK G DD +S K+ K+++MGS+ E+L+ + E L + ND + ++E ++ E L +++ RV ++E+ + REG + LVLD DYTLFDH+S
Sbjct: 22 IALTDSSTVANMKDTIYKETGVRPERQKLLGLKYKGGVPADDVVISELKLKPNTKIMMMGSR-EEELDKVKEPPTDLPEVINDFDIE----EDEIAIENREEYLSKIEKRVRDYKIEVFNPPREGKK-LLVLDIDYTLFDHRS 158 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig110785.2268.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig110785.2268.1 >prot_M-pyrifera_M_contig110785.2268.1 ID=prot_M-pyrifera_M_contig110785.2268.1|Name=mRNA_M-pyrifera_M_contig110785.2268.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=148bp KESRTFSLPSTTPVRELKRSVEEAFGVPIEGQKLVGLKVPKGAEGDDTALback to top mRNA from alignment at M-pyrifera_M_contig110785:147..590+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig110785.2268.1 ID=mRNA_M-pyrifera_M_contig110785.2268.1|Name=mRNA_M-pyrifera_M_contig110785.2268.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=444bp|location=Sequence derived from alignment at M-pyrifera_M_contig110785:147..590+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig110785:147..590+ >mRNA_M-pyrifera_M_contig110785.2268.1 ID=mRNA_M-pyrifera_M_contig110785.2268.1|Name=mRNA_M-pyrifera_M_contig110785.2268.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=888bp|location=Sequence derived from alignment at M-pyrifera_M_contig110785:147..590+ (Macrocystis pyrifera P11B4 male)back to top |