mRNA_M-pyrifera_M_contig110684.2248.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig110684.2248.1 vs. uniprot
Match: A0A7S3BZ52_9VIRI (Hypothetical protein (Fragment) n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3BZ52_9VIRI) HSP 1 Score: 143 bits (360), Expect = 1.710e-39 Identity = 77/168 (45.83%), Postives = 103/168 (61.31%), Query Frame = 1
Query: 1 LGGVTRLEMKVDSRRHSVELLGQVLPNVRELRLSDSVLESLRDLGTRLRHLRVLWVSRCGLTSLDGMGALENLEELYAAFNDIEDVSALAGHENLRVLDLEANRIRSAGALSLLGTCGELRELELATNPISTLPLFRRFCASRIPQLETLDGRDFDAEDREPLDAAVL 504
L GV+ LE+ VD+ + + +G +LP++REL+L+ S L +LRDLGT+L LRVLW+ RC + LDG+GAL L ELYA+FNDI DV +A E L LDLE NR+ A L L C LR L L NP++ +R A +PQLE +D DR P D + +
Sbjct: 11 LQGVSYLELAVDAEQMPINEMGAMLPSLRELKLTGSSLATLRDLGTQLTALRVLWIGRCAVAHLDGLGALPALRELYASFNDIADVGGVAELEELHTLDLEGNRVE-ADQLEWLAACASLRALTLEGNPVAVRQDYRSAVAGTVPQLEYIDDEPVTEADRHPTDKSAV 177
BLAST of mRNA_M-pyrifera_M_contig110684.2248.1 vs. uniprot
Match: A0A1V9ZB88_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZB88_9STRA) HSP 1 Score: 148 bits (374), Expect = 1.710e-38 Identity = 76/165 (46.06%), Postives = 107/165 (64.85%), Query Frame = 1
Query: 10 VTRLEMKVDSRRHSVELLGQVLPNVRELRLSDSVLESLRDLGTRLRHLRVLWVSRCGLTSLDGMGALENLEELYAAFNDIEDVSALAGHENLRVLDLEANRIRSAGALSLLGTCGELRELELATNPISTLPLFRRFCASRIPQLETLDGRDFDAEDREPLDAAVL 504
VT L++ VD+ + SVE LG++LP++ +LRL +S L S RDLGT L L+VLW+ CG+T LDG+GAL L ELY N I D+S L+ H+ L V+DLE N + + LG C +L L+L NP++ +P +R AS IP L +LD + A DR P+ AA++
Sbjct: 86 VTFLQLTVDTAKQSVEALGELLPSLLQLRLHESHLHSFRDLGTSLHSLQVLWLQSCGVTDLDGIGALTGLRELYLQHNAIADISPLSMHDELAVVDLEGNAVLDIVQIEQLGLCPQLSALKLQGNPVAAIPQYRSIVASYIPHLASLDDKPVTAADRTPVTAAMI 250
BLAST of mRNA_M-pyrifera_M_contig110684.2248.1 vs. uniprot
Match: A0A5B8MXV2_9CHLO (Uncharacterized protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MXV2_9CHLO) HSP 1 Score: 147 bits (371), Expect = 2.150e-38 Identity = 74/162 (45.68%), Postives = 109/162 (67.28%), Query Frame = 1
Query: 4 GGVTRLEMKVDSRRHSVELLGQVLPNVRELRLSDSVLESLRDLGTRLRHLRVLWVSRCGLTSLDGMGALENLEELYAAFNDIEDVSALAGHENLRVLDLEANRIRSAGALSLLGTCGELRELELATNPISTLPLFRRFCASRIPQLETLDGRDFDAEDREPL 489
G V +LEM+VDS +++ + G+ LPN++ L+L++S + S+RDLGT ++L+VLW+SRCGL L GM AL NL ELY +FND+ D++ LA EN++V+DLE+NRI ++ LG C +L +L L NP+S +R S +PQL +LD DR P+
Sbjct: 6 GEVQQLEMQVDSEEYNLTIAGEKLPNIQRLKLNESKIHSIRDLGTGWKNLKVLWLSRCGLEDLHGMTALPNLTELYVSFNDVCDITPLADLENIQVIDLESNRIEDLDSVGYLGFCRDLVQLTLEGNPVSNEAGYRAKVVSHVPQLLSLDDLPVTERDRAPV 167
BLAST of mRNA_M-pyrifera_M_contig110684.2248.1 vs. uniprot
Match: T0SCL0_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0SCL0_SAPDV) HSP 1 Score: 146 bits (369), Expect = 8.230e-38 Identity = 73/165 (44.24%), Postives = 106/165 (64.24%), Query Frame = 1
Query: 10 VTRLEMKVDSRRHSVELLGQVLPNVRELRLSDSVLESLRDLGTRLRHLRVLWVSRCGLTSLDGMGALENLEELYAAFNDIEDVSALAGHENLRVLDLEANRIRSAGALSLLGTCGELRELELATNPISTLPLFRRFCASRIPQLETLDGRDFDAEDREPLDAAVL 504
VT L++ +D+ + SVE LG++LP++ +LRL +S L S RDLGT L L+VLW+ RCG+T LDG+GAL L ELY N I D+S L+ H+ L V+DL+ N + + LG C +L L+L NP++++P +R S IP L LD + A DR P+ +A +
Sbjct: 84 VTFLQLSIDTGKQSVEALGELLPSLLQLRLHESKLHSFRDLGTSLHSLQVLWLERCGVTDLDGIGALTGLRELYLNGNCISDISPLSMHDELSVVDLQGNAVMDIVQIEQLGLCPQLTALKLVENPVASIPQYRAIVISYIPHLTALDDKPITAADRTPVTSATI 248
BLAST of mRNA_M-pyrifera_M_contig110684.2248.1 vs. uniprot
Match: A0A7S0T6A7_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0T6A7_9CHLO) HSP 1 Score: 138 bits (348), Expect = 1.820e-37 Identity = 75/157 (47.77%), Postives = 98/157 (62.42%), Query Frame = 1
Query: 19 LEMKVDSRRHSVELLGQVLPNVRELRLSDSVLESLRDLGTRLRHLRVLWVSRCGLTSLDGMGALENLEELYAAFNDIEDVSALAGHENLRVLDLEANRIRSAGALSLLGTCGELRELELATNPISTLPLFRRFCASRIPQLETLDGRDFDAEDREPL 489
LEM+ D+ + +G LP + +LRLS+SVL S R G+ + LRVLWV+R GL L G+ +L L+ELYAAFN++ DVS LA +NL+V+DLEAN++R A LG C L L L NP+S +RR A IP+LE LD R D DR L
Sbjct: 61 LEMRADTTEDDLSGVGAALPALAQLRLSNSVLPSARSFGSTFQRLRVLWVARSGLEDLQGIASLVELKELYAAFNEVSDVSPLAELDNLQVVDLEANQVRDRDAADYLGMCPVLTTLSLEGNPVSNRMYYRRLVARAIPRLEVLDDRPVDDADRAEL 217
BLAST of mRNA_M-pyrifera_M_contig110684.2248.1 vs. uniprot
Match: A0A1Y1HQI7_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HQI7_KLENI) HSP 1 Score: 137 bits (346), Expect = 4.550e-35 Identity = 72/161 (44.72%), Postives = 101/161 (62.73%), Query Frame = 1
Query: 1 LGGVTRLEMKVDSRRHSVELLGQVLPNVRELRLSDSVLESLRDLGTRLRHLRVLWVSRCGLTSLDGMGALENLEELYAAFNDIEDVSALAGHENLRVLDLEANRIRSAGALSLLGTCGELRELELATNPISTLPLFRRFCASRIPQLETLDGRDFDAEDRE 483
L V+ LE+ V++ + +GQ++P +REL+L DS L +RDLGT L L+VLWV RCGL +DG+ +L L ELYAAFNDIED++ +AG ENL +LDLEAN++ ++ LG C +L+ L L N ++ P +R IP L LD DR+
Sbjct: 29 LSTVSCLELSVNAAEACLFDVGQLVPQLRELKLLDSTLPQIRDLGTGLMQLQVLWVPRCGLQEVDGLSSLPKLRELYAAFNDIEDLAPIAGLENLEILDLEANKVADLDGVAFLGMCPKLQALTLEGNDVAAAPNYRSSVVELIPTLTMLDELPVGPSDRD 189
BLAST of mRNA_M-pyrifera_M_contig110684.2248.1 vs. uniprot
Match: D8LM99_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM99_ECTSI) HSP 1 Score: 137 bits (344), Expect = 2.990e-34 Identity = 76/155 (49.03%), Postives = 100/155 (64.52%), Query Frame = 1
Query: 1 LGGVTRLEMKVDSRRHSVELLGQVLPNVRELRLS-DSVLESLRDLGTRLRHLRVLWVSRCGLTSLDGMGALENLEELYAAFNDIEDVSALAGHENLRVLDLEANRIRSAGALSLLGTCGELRELELATNPISTLPLFRRFCASRIPQLETLDGRD 462
L V L + VD++ V+ LG VLP + ELRL SVL S RDLG+ L +LRVLW+S CG+ LDG+GAL LEELY AFND+ED++++A H+ L VLDLE+N ++ A LGTC L L L NP+ +RR +PQL +LD +D
Sbjct: 34 LRDVRHLALAVDTKTTQVDHLGTVLPLLTELRLERGSVLASFRDLGSSLPNLRVLWLSACGVCHLDGVGALTGLEELYLAFNDVEDLTSIALHDRLEVLDLESNCLKDAEQAIHLGTCSRLWSLTLTANPLCRDHNYRRRMVEAVPQLASLDEKD 188
BLAST of mRNA_M-pyrifera_M_contig110684.2248.1 vs. uniprot
Match: F0VZN0_9STRA (Uncharacterized protein AlNc14C2G368 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0VZN0_9STRA) HSP 1 Score: 135 bits (341), Expect = 5.930e-34 Identity = 67/152 (44.08%), Postives = 97/152 (63.82%), Query Frame = 1
Query: 25 MKVDSRRHSVELLGQVLPNVRELRLSDSVLESLRDLGTRLRHLRVLWVSRCGLTSLDGMGALENLEELYAAFNDIEDVSALAGHENLRVLDLEANRIRSAGALSLLGTCGELRELELATNPISTLPLFRRFCASRIPQLETLDGRDFDAEDR 480
+ +DSR+ S EL+GQ+LP+++ L+ +S + S RDLGT LR L++L CG+ LDG+ AL NLEELY ++NDI ++ H+ LRVLDLE N+I + L C LR++ L NP++ LP +R+ + IPQ+E LDG DR
Sbjct: 135 ISIDSRKQSTELIGQLLPSLKRLQFCNSFIASFRDLGTSLRVLKILDARECGIKHLDGISALANLEELYLSYNDITEIDYCFKHDELRVLDLEGNKIADENQVQHLAFCTHLRDVHLRKNPMTKLPHYRQLVVTMIPQVEILDGARVTEADR 286
BLAST of mRNA_M-pyrifera_M_contig110684.2248.1 vs. uniprot
Match: A0A6H5JTQ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTQ1_9PHAE) HSP 1 Score: 135 bits (341), Expect = 7.570e-34 Identity = 76/155 (49.03%), Postives = 99/155 (63.87%), Query Frame = 1
Query: 1 LGGVTRLEMKVDSRRHSVELLGQVLPNVRELRLS-DSVLESLRDLGTRLRHLRVLWVSRCGLTSLDGMGALENLEELYAAFNDIEDVSALAGHENLRVLDLEANRIRSAGALSLLGTCGELRELELATNPISTLPLFRRFCASRIPQLETLDGRD 462
L V L + VD+ V+ LG VLP + ELRL SVL S RDLG+ L +LRVLW+S CG+ LDG+GAL LEELY AFND+ED++++A H+ L VLDLE+N ++ A LGTC L L L NP+ +RR +PQL +LD +D
Sbjct: 34 LRDVRHLALAVDTNTTQVDHLGIVLPLLSELRLERGSVLASFRDLGSSLPNLRVLWLSACGVRHLDGVGALTGLEELYLAFNDVEDLTSIALHDRLEVLDLESNCVKDAEQAIHLGTCSHLWSLTLTANPVCRDLHYRRRMVEAVPQLASLDEKD 188
BLAST of mRNA_M-pyrifera_M_contig110684.2248.1 vs. uniprot
Match: A0A485KIX1_9STRA (Aste57867_7880 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KIX1_9STRA) HSP 1 Score: 133 bits (334), Expect = 5.090e-33 Identity = 72/166 (43.37%), Postives = 99/166 (59.64%), Query Frame = 1
Query: 1 LGGVTRLEMKVDSRRHSVELLGQVLPNVRELRLSDSVLESLRDLGTRLRHLRVLWVSRCGLTSLDGMGALENLEELYAAFNDIEDVSALAGHENLRVLDLEANRIRSAGALSLLGT-------------CGELRELELATNPISTLPLFRRFCASRIPQLETLDGR 459
L V L++ VD+++ SVE LG++LP++ +LRL S+L S RDLGT L L+VLW+ R G+ LDG+GAL L ELY FN+I D+S L+ H+ L V+DL+ N + L LG C L L LA NP++++P +R S IP LE LD R
Sbjct: 75 LNKVNYLQLTVDTQKQSVEALGELLPSMTQLRLHQSILHSFRDLGTSLHGLQVLWLMRSGVKDLDGIGALTGLRELYLQFNEIADISPLSMHDELHVIDLQGNCVEDIVQLEQLGRSIQVLSTNYHSGLCPHLASLNLADNPVASIPQYRPIVCSYIPHLEKLDER 240 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig110684.2248.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig110684.2248.1 >prot_M-pyrifera_M_contig110684.2248.1 ID=prot_M-pyrifera_M_contig110684.2248.1|Name=mRNA_M-pyrifera_M_contig110684.2248.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=160bp MKVDSRRHSVELLGQVLPNVRELRLSDSVLESLRDLGTRLRHLRVLWVSRback to top mRNA from alignment at M-pyrifera_M_contig110684:34..537+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig110684.2248.1 ID=mRNA_M-pyrifera_M_contig110684.2248.1|Name=mRNA_M-pyrifera_M_contig110684.2248.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=504bp|location=Sequence derived from alignment at M-pyrifera_M_contig110684:34..537+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig110684:34..537+ >mRNA_M-pyrifera_M_contig110684.2248.1 ID=mRNA_M-pyrifera_M_contig110684.2248.1|Name=mRNA_M-pyrifera_M_contig110684.2248.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=960bp|location=Sequence derived from alignment at M-pyrifera_M_contig110684:34..537+ (Macrocystis pyrifera P11B4 male)back to top |