mRNA_M-pyrifera_M_contig110664.2244.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig110664.2244.1
Unique NamemRNA_M-pyrifera_M_contig110664.2244.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig110664.2244.1 vs. uniprot
Match: A0A7S3M496_9STRA (Lipoyl synthase, mitochondrial n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M496_9STRA)

HSP 1 Score: 276 bits (707), Expect = 1.230e-89
Identity = 142/211 (67.30%), Postives = 165/211 (78.20%), Query Frame = 1 
Query:    1 WGGREGTATATIMLMGDTCTRGCSFCAVATSPAPAPLDPHEPVNVAKSLAEWGLGYVVLTSVDRDDLPDQGAGHLKAVIQEIKKTTPDLLVECLAPDFQGKDELVEIVATSGLDVFAHNLETVERLQPRVRDRRAGYHQSLHTLEAAKRTHQ-----ATNPPSP--------LITKTSIMLGLGETVPELQQTMRDARSAGVDVITFGQYL 594
            WGG+EGTATATIM+MGDTCTRGCSFC+V TS APAPLDPHEPVNVA+++A WGL YVVLTSVDRD+LPDQGAGH    ++++KK TP LLVECL PDF+G  EL+ +VATSGLDVFAHN+ETVERLQ RVRD RAGY Q+L  LE AK   +     AT P           LITKTS+MLGLGE   E++  +RD R+AGVDV+TFGQYL
Sbjct:  112 WGGKEGTATATIMIMGDTCTRGCSFCSVKTSRAPAPLDPHEPVNVAEAVAGWGLDYVVLTSVDRDELPDQGAGHFAETVRQMKKRTPKLLVECLTPDFRGNKELITMVATSGLDVFAHNMETVERLQRRVRDYRAGYRQTLGVLEHAKLAAEKYYGTATTPGEDGAPVRTRGLITKTSLMLGLGEKEEEIRAALRDLRTAGVDVVTFGQYL 322
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BLAST of mRNA_M-pyrifera_M_contig110664.2244.1 vs. uniprot
Match: A0A6H5JDL1_9PHAE (Lipoyl synthase, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JDL1_9PHAE)

HSP 1 Score: 265 bits (677), Expect = 1.570e-84
Identity = 133/198 (67.17%), Postives = 155/198 (78.28%), Query Frame = 1 
Query:    1 WGGREGTATATIMLMGDTCTRGCSFCAVATSPAPAPLDPHEPVNVAKSLAEWGLGYVVLTSVDRDDLPDQGAGHLKAVIQEIKKTTPDLLVECLAPDFQGKDELVEIVATSGLDVFAHNLETVERLQPRVRDRRAGYHQSLHTLEAAKRTHQATNPPSPLITKTSIMLGLGETVPELQQTMRDARSAGVDVITFGQYL 594
            WGG +GTATATIM+MGDTCTRGCSFCAV TS AP PLD  EP  VAK++ +WGLGYVVLTSVDRDDLPDQGA H  + ++ +K+  P LLVECLAPDF+G  EL E VA SGLDVFAHNLETVERLQ RVRD RAGY QSL  LE AK+  +       +ITKTS+MLG+GET  +++ T+RD R+ G DV+TFGQYL
Sbjct:  138 WGGADGTATATIMIMGDTCTRGCSFCAVKTSRAPPPLDADEPEKVAKAVTDWGLGYVVLTSVDRDDLPDQGANHFASTVRGLKRRAPQLLVECLAPDFRGDLELAEQVALSGLDVFAHNLETVERLQSRVRDHRAGYEQSLSVLEHAKKVTRGE-----VITKTSLMLGVGETPADVEATLRDLRAVGCDVVTFGQYL 330
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BLAST of mRNA_M-pyrifera_M_contig110664.2244.1 vs. uniprot
Match: A0A7S0JUI4_CAFRO (Lipoyl synthase, mitochondrial n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0JUI4_CAFRO)

HSP 1 Score: 262 bits (669), Expect = 1.090e-83
Identity = 136/198 (68.69%), Postives = 156/198 (78.79%), Query Frame = 1 
Query:    1 WGGREGTATATIMLMGDTCTRGCSFCAVATSPAPAPLDPHEPVNVAKSLAEWGLGYVVLTSVDRDDLPDQGAGHLKAVIQEIKKTTPDLLVECLAPDFQGKDELVEIVATSGLDVFAHNLETVERLQPRVRDRRAGYHQSLHTLEAAKRTHQATNPPSPLITKTSIMLGLGETVPELQQTMRDARSAGVDVITFGQYL 594
            WGG EG ATATIM+MGDTCTRGCSFCAV TS  PAPLDP EP +VA ++A WGL YVVLTSVDRDDLPDQG+ HL + ++ +K  +PDLLVE LAPDFQG+ +L+  V  SGLDV AHNLETVERLQ RVRDRRAGY QSL  LEAAK    A NP   ++TKTS+MLG+GE   E+ QT+RD R AGVDV+T GQYL
Sbjct:  122 WGGGEGVATATIMVMGDTCTRGCSFCAVKTSNRPAPLDPAEPDSVAAAVASWGLDYVVLTSVDRDDLPDQGSEHLASTVKALKAKSPDLLVEVLAPDFQGRADLIRTVTNSGLDVHAHNLETVERLQGRVRDRRAGYKQSLAVLEAAK----AANPN--VLTKTSLMLGVGERPEEIIQTLRDCREAGVDVVTLGQYL 313
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BLAST of mRNA_M-pyrifera_M_contig110664.2244.1 vs. uniprot
Match: A0A6G0WRM2_9STRA (Lipoyl synthase, mitochondrial n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WRM2_9STRA)

HSP 1 Score: 259 bits (662), Expect = 4.540e-83
Identity = 127/197 (64.47%), Postives = 155/197 (78.68%), Query Frame = 1 
Query:    4 GGREGTATATIMLMGDTCTRGCSFCAVATSPAPAPLDPHEPVNVAKSLAEWGLGYVVLTSVDRDDLPDQGAGHLKAVIQEIKKTTPDLLVECLAPDFQGKDELVEIVATSGLDVFAHNLETVERLQPRVRDRRAGYHQSLHTLEAAKRTHQATNPPSPLITKTSIMLGLGETVPELQQTMRDARSAGVDVITFGQYL 594
            GG+ GTATATIMLMGDTCTRGCSFCAV TS  P PLDP EPVNV+K++A+WGL Y+V TSVDRDDLPD GA H  + ++ +++  P++L+ECL PDF G+ +LVE VA SGLDVFAHN+ETVERLQ RVRD RA Y QSL  LE AK    +      L+TKTSIMLG+GET  ++ QT++D R++GVDV+TFGQYL
Sbjct:  109 GGKNGTATATIMLMGDTCTRGCSFCAVKTSRRPPPLDPDEPVNVSKAIAQWGLDYIVFTSVDRDDLPDAGAEHFASTVRHLRQELPEILIECLTPDFSGRVDLVEKVARSGLDVFAHNVETVERLQRRVRDYRANYRQSLRVLELAKEAQPS------LVTKTSIMLGVGETPADVMQTLKDLRTSGVDVVTFGQYL 299
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BLAST of mRNA_M-pyrifera_M_contig110664.2244.1 vs. uniprot
Match: W4G4W1_9STRA (Lipoyl synthase, mitochondrial n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G4W1_9STRA)

HSP 1 Score: 259 bits (661), Expect = 6.240e-83
Identity = 127/197 (64.47%), Postives = 155/197 (78.68%), Query Frame = 1 
Query:    4 GGREGTATATIMLMGDTCTRGCSFCAVATSPAPAPLDPHEPVNVAKSLAEWGLGYVVLTSVDRDDLPDQGAGHLKAVIQEIKKTTPDLLVECLAPDFQGKDELVEIVATSGLDVFAHNLETVERLQPRVRDRRAGYHQSLHTLEAAKRTHQATNPPSPLITKTSIMLGLGETVPELQQTMRDARSAGVDVITFGQYL 594
            GG+ GTATATIMLMGDTCTRGCSFCAV TS  P PLDP+EP NV+K++A+WGL Y+V TSVDRDDLPD GA H  + +++++   P++L+ECL PDF G+ +LVE VA SGLDVFAHN+ETVERLQ RVRD RA Y QSL  LE AK    +      LITKTSIMLG+GET  ++ QT++D R++GVDV+TFGQYL
Sbjct:  108 GGKNGTATATIMLMGDTCTRGCSFCAVKTSRRPPPLDPNEPANVSKAIAQWGLDYIVFTSVDRDDLPDAGAEHFASTVRQLRAALPEILIECLTPDFSGRVDLVETVARSGLDVFAHNIETVERLQRRVRDYRANYRQSLAVLELAKAAQPS------LITKTSIMLGVGETPEDVMQTLQDLRASGVDVVTFGQYL 298
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BLAST of mRNA_M-pyrifera_M_contig110664.2244.1 vs. uniprot
Match: A0A7S2USD1_9STRA (Lipoyl synthase, mitochondrial n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USD1_9STRA)

HSP 1 Score: 257 bits (657), Expect = 2.670e-82
Identity = 129/198 (65.15%), Postives = 149/198 (75.25%), Query Frame = 1 
Query:    1 WGGREGTATATIMLMGDTCTRGCSFCAVATSPAPAPLDPHEPVNVAKSLAEWGLGYVVLTSVDRDDLPDQGAGHLKAVIQEIKKTTPDLLVECLAPDFQGKDELVEIVATSGLDVFAHNLETVERLQPRVRDRRAGYHQSLHTLEAAKRTHQATNPPSPLITKTSIMLGLGETVPELQQTMRDARSAGVDVITFGQYL 594
            WGG +GTATATIM+MGDTCTRGCSFC+V TS AP PLDP EP NVA+++AEWGL YVVLTSVDRDD PDQG+ H    ++ +K   PDLLVECL PDF+G+ +L+  VA SGLDVFAHNLETVERL PRVRD RA YHQSL  L  AK           LITK+S+MLGLGE   E+ QT++D R    DV+TFGQYL
Sbjct:  110 WGGADGTATATIMIMGDTCTRGCSFCSVKTSRAPPPLDPKEPENVAQAIAEWGLDYVVLTSVDRDDQPDQGSEHFAQTVRNLKARKPDLLVECLTPDFRGQLDLISNVARSGLDVFAHNLETVERLTPRVRDHRASYHQSLQVLAEAKSAKPG------LITKSSLMLGLGEKPEEIDQTLQDLRKVDCDVVTFGQYL 301
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BLAST of mRNA_M-pyrifera_M_contig110664.2244.1 vs. uniprot
Match: A0A7S4DJC2_HETAK (Lipoyl synthase, mitochondrial n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DJC2_HETAK)

HSP 1 Score: 256 bits (655), Expect = 4.340e-82
Identity = 135/199 (67.84%), Postives = 152/199 (76.38%), Query Frame = 1 
Query:    1 WGGRE-GTATATIMLMGDTCTRGCSFCAVATSPAPAPLDPHEPVNVAKSLAEWGLGYVVLTSVDRDDLPDQGAGHLKAVIQEIKKTTPDLLVECLAPDFQGKDELVEIVATSGLDVFAHNLETVERLQPRVRDRRAGYHQSLHTLEAAKRTHQATNPPSPLITKTSIMLGLGETVPELQQTMRDARSAGVDVITFGQYL 594
            WGG E G ATATIM+MGDTCTRGCSFCAV T  AP PLDP EP N A+++AEWGL YVVLTSVDRDD PDQGA H  A ++ IK+  P +LVECL PDF+G+  LV  VATSGLDVFAHNLETVERLQ RVRD RAGY QSL  LEAAK    A  P   LITKTS+MLG GE   E++QT++D R+   DV+TFGQYL
Sbjct:  104 WGGGEDGFATATIMIMGDTCTRGCSFCAVKTHRAPPPLDPQEPENTAQAIAEWGLDYVVLTSVDRDDQPDQGAAHFAATVRRIKEKRPSMLVECLTPDFRGELPLVRQVATSGLDVFAHNLETVERLQRRVRDHRAGYSQSLRVLEAAK----AAQPK--LITKTSLMLGFGEKPEEIEQTLKDLRAVDCDVVTFGQYL 296
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BLAST of mRNA_M-pyrifera_M_contig110664.2244.1 vs. uniprot
Match: A0A7S1UTS5_9STRA (Lipoyl synthase, mitochondrial n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UTS5_9STRA)

HSP 1 Score: 256 bits (654), Expect = 9.060e-82
Identity = 131/199 (65.83%), Postives = 158/199 (79.40%), Query Frame = 1 
Query:    1 WGGREG-TATATIMLMGDTCTRGCSFCAVATSPAPAPLDPHEPVNVAKSLAEWGLGYVVLTSVDRDDLPDQGAGHLKAVIQEIKKTTPDLLVECLAPDFQGKDELVEIVATSGLDVFAHNLETVERLQPRVRDRRAGYHQSLHTLEAAKRTHQATNPPSPLITKTSIMLGLGETVPELQQTMRDARSAGVDVITFGQYL 594
            WGG +  TATATIM+MGDTCTRGCSFC+V TS AP PLDP EP  VA ++ +WGL YVVLTSVDRDDLPDQG+ H + VIQ +K+ +P+LLVE L PDFQG+ +L+E VATSGLDV+AHN+ETVERL PRVRDRRAGY QS+  L+  K     +  PS L+TKTS+MLGL ET  E++QT+RD RS  V+V+TFGQYL
Sbjct:  118 WGGSQSETATATIMIMGDTCTRGCSFCSVKTSRAPPPLDPEEPNKVATAIHKWGLDYVVLTSVDRDDLPDQGSQHFREVIQRLKELSPELLVEALTPDFQGRTDLIEAVATSGLDVYAHNVETVERLTPRVRDRRAGYKQSMEVLDFVK-----SKQPS-LVTKTSLMLGLTETDDEIRQTLRDLRSVDVNVVTFGQYL 310
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BLAST of mRNA_M-pyrifera_M_contig110664.2244.1 vs. uniprot
Match: A0A485LAF9_9STRA (Lipoyl synthase, mitochondrial n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485LAF9_9STRA)

HSP 1 Score: 255 bits (651), Expect = 2.150e-81
Identity = 126/197 (63.96%), Postives = 152/197 (77.16%), Query Frame = 1 
Query:    4 GGREGTATATIMLMGDTCTRGCSFCAVATSPAPAPLDPHEPVNVAKSLAEWGLGYVVLTSVDRDDLPDQGAGHLKAVIQEIKKTTPDLLVECLAPDFQGKDELVEIVATSGLDVFAHNLETVERLQPRVRDRRAGYHQSLHTLEAAKRTHQATNPPSPLITKTSIMLGLGETVPELQQTMRDARSAGVDVITFGQYL 594
            GG+ GTATATIMLMGDTCTRGCSFCAV TS  P PLDP+EP NV+K++A+WGL Y+V TSVDRDDLPD GA H  A ++ ++   P++L+ECL PDF G+ +L+E VA SGLDVFAHN+ETVERLQ RVRD RA Y QSL  LE AK           LITKTSIMLG+GET  ++ QT++D R++ VDV+TFGQYL
Sbjct:  112 GGKNGTATATIMLMGDTCTRGCSFCAVKTSRRPPPLDPNEPENVSKAIAQWGLDYIVFTSVDRDDLPDAGADHFAATVRNLRAALPEILIECLTPDFSGRVDLIETVARSGLDVFAHNIETVERLQRRVRDYRANYRQSLAVLERAKEAQPT------LITKTSIMLGVGETPADILQTLQDLRASHVDVVTFGQYL 302
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BLAST of mRNA_M-pyrifera_M_contig110664.2244.1 vs. uniprot
Match: A0A2P4XJF4_9STRA (Lipoyl synthase (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XJF4_9STRA)

HSP 1 Score: 251 bits (642), Expect = 4.910e-81
Identity = 127/197 (64.47%), Postives = 151/197 (76.65%), Query Frame = 1 
Query:    4 GGREGTATATIMLMGDTCTRGCSFCAVATSPAPAPLDPHEPVNVAKSLAEWGLGYVVLTSVDRDDLPDQGAGHLKAVIQEIKKTTPDLLVECLAPDFQGKDELVEIVATSGLDVFAHNLETVERLQPRVRDRRAGYHQSLHTLEAAKRTHQATNPPSPLITKTSIMLGLGETVPELQQTMRDARSAGVDVITFGQYL 594
            GG++G ATATIMLMGDTCTRGCSFCAV TS  PAPLDP EP  VA+++A WGL Y+V TSVDRDD  D GAGH    +  ++   P++L+ECL PDFQG D L++ VATSGLDVFAHNLETVERLQ RVRD RA Y QSLH LE AK      + P  L+TKTS+MLG+GE   ++ QT+RD R++GVDV+TFGQYL
Sbjct:   37 GGKDGIATATIMLMGDTCTRGCSFCAVKTSKKPAPLDPEEPNKVAEAIAAWGLDYIVFTSVDRDDYEDLGAGHFAQTVSTLRAKLPEILIECLTPDFQGHDNLIDQVATSGLDVFAHNLETVERLQRRVRDYRANYKQSLHVLERAK-----VSAPH-LVTKTSLMLGVGERNEDVFQTLRDLRNSGVDVVTFGQYL 227
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig110664.2244.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3M496_9STRA1.230e-8967.30Lipoyl synthase, mitochondrial n=1 Tax=Spumella el... [more]
A0A6H5JDL1_9PHAE1.570e-8467.17Lipoyl synthase, mitochondrial n=2 Tax=Ectocarpus ... [more]
A0A7S0JUI4_CAFRO1.090e-8368.69Lipoyl synthase, mitochondrial n=3 Tax=Cafeteria r... [more]
A0A6G0WRM2_9STRA4.540e-8364.47Lipoyl synthase, mitochondrial n=1 Tax=Aphanomyces... [more]
W4G4W1_9STRA6.240e-8364.47Lipoyl synthase, mitochondrial n=7 Tax=Aphanomyces... [more]
A0A7S2USD1_9STRA2.670e-8265.15Lipoyl synthase, mitochondrial n=1 Tax=Fibrocapsa ... [more]
A0A7S4DJC2_HETAK4.340e-8267.84Lipoyl synthase, mitochondrial n=1 Tax=Heterosigma... [more]
A0A7S1UTS5_9STRA9.060e-8265.83Lipoyl synthase, mitochondrial n=1 Tax=Grammatopho... [more]
A0A485LAF9_9STRA2.150e-8163.96Lipoyl synthase, mitochondrial n=2 Tax=Aphanomyces... [more]
A0A2P4XJF4_9STRA4.910e-8164.47Lipoyl synthase (Fragment) n=1 Tax=Phytophthora pa... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig110664contigM-pyrifera_M_contig110664:2..595 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score263.8
Seed ortholog evalue6.2e-68
Seed eggNOG ortholog157072.XP_008873914.1
Preferred nameLIAS
KEGG rclassRC01978
KEGG koko:K03644
KEGG ReactionR07767,R07768
KEGG Pathwayko00785,ko01100,map00785,map01100
Hectar predicted targeting categoryother localisation
GOsGO:0001505,GO:0001838,GO:0001841,GO:0001843,GO:0002009,GO:0002237,GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006464,GO:0006520,GO:0006544,GO:0006546,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0006950,GO:0006952,GO:0006954,GO:0006979,GO:0007275,GO:0007399,GO:0008150,GO:0008152,GO:0008610,GO:0009056,GO:0009058,GO:0009063,GO:0009069,GO:0009071,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009605,GO:0009607,GO:0009617,GO:0009653,GO:0009790,GO:0009792,GO:0009888,GO:0009987,GO:0010033,GO:0010467,GO:0014020,GO:0016053,GO:0016054,GO:0016331,GO:0016740,GO:0016782,GO:0016783,GO:0016992,GO:0017144,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0021915,GO:0031974,GO:0032496,GO:0032501,GO:0032502,GO:0032787,GO:0033993,GO:0034641,GO:0035148,GO:0035239,GO:0035295,GO:0036211,GO:0042133,GO:0042135,GO:0042221,GO:0042737,GO:0043009,GO:0043167,GO:0043169,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0046395,GO:0046483,GO:0046872,GO:0046914,GO:0048598,GO:0048646,GO:0048729,GO:0048731,GO:0048856,GO:0050896,GO:0051186,GO:0051188,GO:0051604,GO:0051704,GO:0051707,GO:0060429,GO:0060562,GO:0060606,GO:0065007,GO:0065008,GO:0070013,GO:0070283,GO:0071704,GO:0072175,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901700
EggNOG free text desc.lipoate synthase activity
EggNOG OGsCOG0320@1,KOG2672@2759
Ec32 ortholog descriptionRadical SAM
Ec32 orthologEc-14_004300.1
EC2.8.1.8
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons1
Model size594
Cds size594
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815618.6222353-CDS-M-pyrifera_M_contig110664:1..5951622815618.6222353-CDS-M-pyrifera_M_contig110664:1..595Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig110664 2..595 +
1692277490.168458-CDS-M-pyrifera_M_contig110664:1..5951692277490.168458-CDS-M-pyrifera_M_contig110664:1..595Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig110664 2..595 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig110664.2244.1prot_M-pyrifera_M_contig110664.2244.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig110664 2..595 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig110664.2244.1

>prot_M-pyrifera_M_contig110664.2244.1 ID=prot_M-pyrifera_M_contig110664.2244.1|Name=mRNA_M-pyrifera_M_contig110664.2244.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=198bp
WGGREGTATATIMLMGDTCTRGCSFCAVATSPAPAPLDPHEPVNVAKSLA
EWGLGYVVLTSVDRDDLPDQGAGHLKAVIQEIKKTTPDLLVECLAPDFQG
KDELVEIVATSGLDVFAHNLETVERLQPRVRDRRAGYHQSLHTLEAAKRT
HQATNPPSPLITKTSIMLGLGETVPELQQTMRDARSAGVDVITFGQYL
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mRNA from alignment at M-pyrifera_M_contig110664:2..595+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig110664.2244.1 ID=mRNA_M-pyrifera_M_contig110664.2244.1|Name=mRNA_M-pyrifera_M_contig110664.2244.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=594bp|location=Sequence derived from alignment at M-pyrifera_M_contig110664:2..595+ (Macrocystis pyrifera P11B4 male)
TGGGGGGGTAGGGAAGGTACAGCCACTGCTACGATTATGTTGATGGGTGA
TACTTGCACGAGAGGTTGCTCGTTCTGTGCAGTGGCTACTTCTCCTGCTC
CAGCACCACTAGACCCACATGAACCAGTAAACGTCGCAAAGAGTCTTGCA
GAATGGGGGTTGGGGTATGTTGTTCTCACTTCCGTGGATCGGGATGATTT
ACCAGACCAAGGAGCAGGTCATTTGAAGGCAGTCATCCAGGAAATCAAGA
AAACTACGCCAGATTTGCTTGTGGAATGTCTTGCTCCAGATTTTCAAGGA
AAAGATGAGTTGGTGGAAATTGTGGCCACCAGTGGACTTGATGTGTTTGC
GCATAACCTTGAGACAGTTGAACGCCTCCAACCACGTGTCAGAGATCGCA
GAGCTGGTTATCACCAGTCCTTGCATACATTGGAAGCTGCAAAGCGGACA
CATCAAGCTACAAACCCACCATCACCACTCATCACCAAAACTTCCATCAT
GTTAGGTCTTGGAGAAACTGTACCAGAGCTCCAACAAACCATGCGAGATG
CCAGAAGTGCAGGTGTGGACGTGATTACATTTGGTCAATACCTT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig110664:2..595+

>mRNA_M-pyrifera_M_contig110664.2244.1 ID=mRNA_M-pyrifera_M_contig110664.2244.1|Name=mRNA_M-pyrifera_M_contig110664.2244.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1188bp|location=Sequence derived from alignment at M-pyrifera_M_contig110664:2..595+ (Macrocystis pyrifera P11B4 male)
TGGGGGGGTAGGGAAGGTACAGCCACTGCTACGATTATGTTGATGGGTGA
TACTTGCACGAGAGGTTGCTCGTTCTGTGCAGTGGCTACTTCTCCTGCTC
CAGCACCACTAGACCCACATGAACCAGTAAACGTCGCAAAGAGTCTTGCA
GAATGGGGGTTGGGGTATGTTGTTCTCACTTCCGTGGATCGGGATGATTT
ACCAGACCAAGGAGCAGGTCATTTGAAGGCAGTCATCCAGGAAATCAAGA
AAACTACGCCAGATTTGCTTGTGGAATGTCTTGCTCCAGATTTTCAAGGA
AAAGATGAGTTGGTGGAAATTGTGGCCACCAGTGGACTTGATGTGTTTGC
GCATAACCTTGAGACAGTTGAACGCCTCCAACCACGTGTCAGAGATCGCA
GAGCTGGTTATCACCAGTCCTTGCATACATTGGAAGCTGCAAAGCGGACA
CATCAAGCTACAAACCCACCATCACCACTCATCACCAAAACTTCCATCAT
GTTAGGTCTTGGAGAAACTGTACCAGAGCTCCAACAAACCATGCGAGATG
CCAGAAGTGCAGGTGTGGACGTGATTACATTTGGTCAATACCTTTGGGGG
GGTAGGGAAGGTACAGCCACTGCTACGATTATGTTGATGGGTGATACTTG
CACGAGAGGTTGCTCGTTCTGTGCAGTGGCTACTTCTCCTGCTCCAGCAC
CACTAGACCCACATGAACCAGTAAACGTCGCAAAGAGTCTTGCAGAATGG
GGGTTGGGGTATGTTGTTCTCACTTCCGTGGATCGGGATGATTTACCAGA
CCAAGGAGCAGGTCATTTGAAGGCAGTCATCCAGGAAATCAAGAAAACTA
CGCCAGATTTGCTTGTGGAATGTCTTGCTCCAGATTTTCAAGGAAAAGAT
GAGTTGGTGGAAATTGTGGCCACCAGTGGACTTGATGTGTTTGCGCATAA
CCTTGAGACAGTTGAACGCCTCCAACCACGTGTCAGAGATCGCAGAGCTG
GTTATCACCAGTCCTTGCATACATTGGAAGCTGCAAAGCGGACACATCAA
GCTACAAACCCACCATCACCACTCATCACCAAAACTTCCATCATGTTAGG
TCTTGGAGAAACTGTACCAGAGCTCCAACAAACCATGCGAGATGCCAGAA
GTGCAGGTGTGGACGTGATTACATTTGGTCAATACCTT
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