mRNA_M-pyrifera_M_contig110630.2232.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig110630.2232.1
Unique NamemRNA_M-pyrifera_M_contig110630.2232.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig110630.2232.1 vs. uniprot
Match: A0A5A8D944_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D944_CAFRO)

HSP 1 Score: 169 bits (428), Expect = 2.680e-45
Identity = 88/180 (48.89%), Postives = 116/180 (64.44%), Query Frame = 1
Query:    1 DDIIAATHAKRNELEAFIYKARDDFGDGGELRPFVDRERADEFVGGLMDEEDWVCYGDGCDADLDTLSARLTNLQSFTTPAYKRKWEAEHRDAASAELVAAIERYQEISRSTDQTYDHLEESDRDTLRAACREAEVWLRKAQDDQMSLRGDQDPAFTVADIRKHMDTLKRECEPIATRPK 540
            DDII  T A RNE+E ++Y  RD     G L  F   E +      L+D EDWVCYG+G +ADL+TL+AR+  L+S   P  +R+WEAEHR  A+AEL+AA+ER+QE+ RSTD+ Y+HL + DRD LR+A R AE WLR  QD Q +    ++P    ADI+     L  EC+PIA +PK
Sbjct:  668 DDIIRRTQALRNEIEEYVYSMRDRMD--GSLAGFATEEESSALKAELLDAEDWVCYGEGFEADLETLNARMAKLRSLGDPIAERQWEAEHRGPAAAELMAAVERFQEVVRSTDERYEHLSDEDRDRLRSAIRTAEEWLRDLQDKQAAAPPVRNPVLKTADIQAKQRWLIAECQPIANKPK 845          
BLAST of mRNA_M-pyrifera_M_contig110630.2232.1 vs. uniprot
Match: A0A7S1XLS6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XLS6_9STRA)

HSP 1 Score: 119 bits (297), Expect = 1.150e-27
Identity = 66/173 (38.15%), Postives = 97/173 (56.07%), Query Frame = 1
Query:   31 RNELEAFIYKARDDFGDGGELRPFVDRERADEFVGGLMDEEDWVCYGDGCDADLDTLSARLTNLQSFTTPAYKRKWEAEHRDAASAELVAAIERYQEISRSTDQTYDHLEESDRDTLRAACREAEVWLRKAQDDQMSLRGDQDPAFTVADIRKHMDTLKRECEPIATRPKPAP 549
            RN+LE +IY  RD   D  +L+ F+  E  + F   L D EDW+   +G +   DT   +L  L+++  P   R +EA +R+AA+ EL    + Y  ++ S+D  Y HL + D+ TLR     A+ WL      Q SL  D+DP  TVA +R+    L++ C+PIAT+PKPAP
Sbjct:  620 RNDLETYIYAKRDAIID--DLKDFITSEEKEVFGKALTDMEDWLYSDEGYEGTKDTFLGKLNALKAYGDPVEARVYEANYREAAADELKVLADSYVSVANSSDAKYAHLSDEDKGTLRGDATAAQTWLYDMLAKQASLGLDEDPVVTVAQLRERAQALRKVCQPIATKPKPAP 790          
BLAST of mRNA_M-pyrifera_M_contig110630.2232.1 vs. uniprot
Match: F0XY57_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XY57_AURAN)

HSP 1 Score: 112 bits (279), Expect = 3.010e-25
Identity = 71/186 (38.17%), Postives = 100/186 (53.76%), Query Frame = 1
Query:    1 DDIIAATHAKRNELEAFIYKARDDFGDGGELRPFVDRERADEFVGGLMDEEDWVCYGDGCDADLDTLSARLTNLQSFTTPAYKRKWEAEHRDAASAELVAAIERYQEISRSTDQTYDHLEESDRDTLRAACREAEVWLRKAQDDQMSLRGDQDPAFTVADIRKHMDTLKRECEPIATRPKPAPKKE 558
            D +I  T+  RNELEA+IYK RDD    G+LRPFV  +    F   +   E+W+  GDG DA     +ARL +L +  +P   R    E R AA + L   IE  +  + S+D+ + H+++S+R T+R A  +A  WL    D Q  L    DPA   AD+   +  L+R  + I  +PKP PKKE
Sbjct:  648 DRVIQETNDMRNELEAYIYKMRDDVI--GDLRPFVADDAKAAFEAAIGGAEEWLYEGDGYDATKSQYAARLKDLHALGSPIQARFKAHEDRPAAVSALQTKIEDLKTFANSSDECFAHVDDSERATVRDAATKAGDWLMDMLDKQGKLEQHDDPALLPADVSAKLGDLERNTKAILAKPKPIPKKE 831          
BLAST of mRNA_M-pyrifera_M_contig110630.2232.1 vs. uniprot
Match: A0A2D4BW29_PYTIN (Heat shock protein 70 putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BW29_PYTIN)

HSP 1 Score: 109 bits (273), Expect = 2.050e-24
Identity = 66/187 (35.29%), Postives = 99/187 (52.94%), Query Frame = 1
Query:    1 DDIIAATHAKRNELEAFIYKARDDFGDGGELRPFVDRERADEFVGGLMDEEDWVCYGDGCDADLDTLSARLTNLQSFTTPAYKRKWEAEHRDAASAELVAAIERYQEISRSTDQTYDHLEESDRDTLRAACREAEVWLRKAQDDQMSLRGDQDPAFTVADIRKHMDTLKRECEPIATRPKPAPKKES 561
            D +I  T  KRNELE+F+Y  R+   D   L  FV           L + EDW+   +G D+      A+L  L+ F++P   R  E+  R  A++EL + +E Y+ ++ ST++TY H  + +R+TLR A  +AE WL      Q +L+    P  T   IRK  + ++    PI T+PKPAPK E+
Sbjct: 1378 DRVIEETFNKRNELESFVYDLRNQLTD--RLAGFVSESEKASTEDKLTEIEDWLYSDEGFDSTKSVYQAKLDELREFSSPIEFRLTESTERAVATSELQSVLEEYKRMANSTEETYAHWSQQERETLRKAAADAEAWLFDELAKQANLKPTDTPVLTSEAIRKKAEVVRAVALPIVTKPKPAPKVET 1562          
BLAST of mRNA_M-pyrifera_M_contig110630.2232.1 vs. uniprot
Match: A0A8J2SJ65_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SJ65_9STRA)

HSP 1 Score: 105 bits (261), Expect = 7.680e-23
Identity = 65/181 (35.91%), Postives = 97/181 (53.59%), Query Frame = 1
Query:    1 DDIIAATHAKRNELEAFIYKARDDFGDGGELRPFVDRERADEFVGGLMDEEDWVCYGDGCDADLDTLSARLTNLQSFTTPAYKRKWEAEHRDAASAELVAAIERYQEISRSTDQTYDHLEESDRDTLRAACREAEVWLRKAQDDQMSLRGDQDPAFTVADIRKHMDTLKRECEPIATRPKP 543
            D +I  T+  RNELEA+IYK RD+    G+LRP+V  +   +F  GL D E W+  GDG DA     + RL ++++    A  R+     R +  AEL A +E  +    ST + + H+ + DR T+R A  +A  WL ++ + Q SL   QDP    + I+  +  L +   PI T+PKP
Sbjct:  598 DRVIRETNDMRNELEAYIYKMRDEVI--GDLRPYVSDDAKQKFEAGLNDAETWLYEGDGYDATKSQYAQRLKDVRNIGDAAELRRKADRERPSLVAELQAKVEALKTFCNSTSEEHAHIGDDDRGTVRDAASKASEWLLESLEKQGSLEQCQDPVLLPSHIKDKLYDLDQATRPILTKPKP 776          
BLAST of mRNA_M-pyrifera_M_contig110630.2232.1 vs. uniprot
Match: A0A830HGY9_9CHLO (Uncharacterized protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HGY9_9CHLO)

HSP 1 Score: 89.0 bits (219), Expect = 3.190e-17
Identity = 59/183 (32.24%), Postives = 90/183 (49.18%), Query Frame = 1
Query:    1 DDIIAATHAKRNELEAFIYKARDDFGDGGELRPFVDRERADEFVGGLMDEEDWVCYGDGCDADLDTLSARLTNLQSFTTPAYKRKWEAEHRDAASAELVAAIERYQEISRSTDQTYDHLEESDRDTLRAACREAEVWLRKAQDDQMSLRGDQDPAFTVADIRKHMDTLKRECEPIATRPKPAP 549
            D I   T  K+NELEA+IY  R+   D      +V       F   L   EDW+ Y DG D        ++  L++   P  +R  EA  R   ++ L A  +R+ E++  +D  Y H+E+ D+D +   C +A +WL+     Q S      P    ADI +  +T++R C+PI ++PKPAP
Sbjct:  606 DRIQEETKDKKNELEAYIYSMRNKLCDT--YTEYVTEGDKSSFNSKLDSMEDWL-YEDGEDETKGVYVQKIGELKAIGDPIEERYNEAASRPEVASNLQAVCKRFTEMATGSDAAYAHIEQGDKDKVTKECADALMWLQDKLAQQESNAKTAAPVVFTADINRKRETVERFCQPIMSKPKPAP 785          
BLAST of mRNA_M-pyrifera_M_contig110630.2232.1 vs. uniprot
Match: A0A5K3EKN5_MESCO (Uncharacterized protein n=3 Tax=Mesocestoides corti TaxID=53468 RepID=A0A5K3EKN5_MESCO)

HSP 1 Score: 68.2 bits (165), Expect = 5.010e-10
Identity = 60/176 (34.09%), Postives = 83/176 (47.16%), Query Frame = 1
Query:   31 RNELEAFIYKARDDFGDGGELRPFVDRERADEFVGGLMDEEDWVCYGDGCDADLDTLSARLTNLQSFTTPAYKRKWEAEHRDAASAELVAAIERYQEISRST---DQTYDHLEESDRDTLRAACREAEVWLRKAQDDQMSLRGDQDPAFTVADIRKHMDTLKRECEPIATRPKPAP 549
            +N LEA++Y+ RD   +   L+     ER D F   L + EDW+ YG+G DA    +S RL  L+        R  E E R  A   L  A E  Q +  S    D  YDHL + D   +  A R  + +L+   +    L+   DP+   AD+    + L R C PI +RPKPAP
Sbjct:  626 KNALEAYVYEMRDKL-ETCLLQHTTVAER-DSFKELLNETEDWI-YGEGEDAKKSVISNRLDTLKQTGDRFCIRFSEFESRPLAIRALSNACENIQRVVESYSSGDSNYDHLCKEDMTKVENALRAKQQYLQTFLETVGKLQPTSDPSVFSADLYNAKNELDRICNPIISRPKPAP 798          
BLAST of mRNA_M-pyrifera_M_contig110630.2232.1 vs. uniprot
Match: A0A5B8MKD7_9CHLO (Heat shock protein Hsp70 n=2 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MKD7_9CHLO)

HSP 1 Score: 67.4 bits (163), Expect = 9.140e-10
Identity = 50/179 (27.93%), Postives = 78/179 (43.58%), Query Frame = 1
Query:   19 THAKRNELEAFIYKARDDFGDGGELRPFVDRERADEFVGGLMDEEDWVCYGDGCDADLDTLSARLTNLQSFTTPAYKRKWEAEHRDAASAELVAAIERYQEISRSTDQTYDHLEESDRDTLRAACREAEVWLRKAQDDQMSLRGDQDPAFTVADIRKHMDTLKRECEPIATRPKPAPKK 555
            T   RN LE +I  AR    D      +V  +   +F   L + EDW+ Y +G D   +    +   L+    P  +R  E E R  A+  LV     + +++ S D  Y H+   ++  +   C+ A  WL +    Q +      P     DI K  + ++R CEPI ++P PAP K
Sbjct:  602 TKEARNNLEGYILSARSKLYDS--WNDYVTEDDRSKFSKTLDETEDWM-YDEGEDEAREVYVKKTDFLRGIGDPIEERHMENEKRGPAAQGLVETCNMFTQLATSEDAKYSHITAEEKGRVLKECQTAMTWLSEKIAMQDNTPKTVSPIIMSFDIIKKKEVIQRVCEPIMSKPAPAPPK 777          
BLAST of mRNA_M-pyrifera_M_contig110630.2232.1 vs. uniprot
Match: A0A0R3WNM4_HYDTA (Uncharacterized protein n=1 Tax=Hydatigena taeniaeformis TaxID=6205 RepID=A0A0R3WNM4_HYDTA)

HSP 1 Score: 66.6 bits (161), Expect = 1.440e-9
Identity = 53/176 (30.11%), Postives = 78/176 (44.32%), Query Frame = 1
Query:   31 RNELEAFIYKARDDFGDGGELRPFVDRERADEFVGGLMDEEDWVCYGDGCDADLDTLSARLTNLQSFTTPAYKRKWEAEHRDAASAELVAAIERYQEISR---STDQTYDHLEESDRDTLRAACREAEVWLRKAQDDQMSLRGDQDPAFTVADIRKHMDTLKRECEPIATRPKPAP 549
            +N LEA++Y+ R        L+ +      D F   L D EDW+ Y +G DA   T+S RL  LQ        R  EA+ R  A   L  + E+ +++     + D  YDHL + D   +    +  +  L    +    L    DP   V+++      L+  C PI TRPKPAP
Sbjct:  213 KNALEAYVYEMRSKLETC--LQHYTTETERDSFNKALTDTEDWI-YDEGEDAKKSTISKRLKALQQTGDRYCLRFAEADSRRPAIEALANSCEKVKQVVEDYAAGDPQYDHLSKEDMAKVENTLKTMQQRLNAFVEAAKQLHPTSDPTVFVSELYNAQKELESICNPIITRPKPAP 385          
BLAST of mRNA_M-pyrifera_M_contig110630.2232.1 vs. uniprot
Match: A0A0G2E792_9EURO (Putative hsp70 family chaperone lhs1 n=1 Tax=Phaeomoniella chlamydospora TaxID=158046 RepID=A0A0G2E792_9EURO)

HSP 1 Score: 53.9 bits (128), Expect = 3.920e-5
Identity = 37/99 (37.37%), Postives = 50/99 (50.51%), Query Frame = 1
Query:   34 NELEAFIYKARDDFGDGGELRPFVDRERADEFVGGLMDEEDWVCYGDGCDADLDTLSARLTNLQSFTTPAYKRKWEAEHRDAASAELVAAIERYQEISR 330
            N LEAF Y+ARD   D  E + F            L +  DW+ YG+G DA L+ L A+L +L++   P  KRK E   RD A   L   IE  + ++R
Sbjct:  691 NNLEAFTYRARDYLEDE-EFKAFSSDAIRGTLQEKLSEISDWL-YGEGLDASLNELKAKLKDLRTLVDPVLKRKEENAKRDIAVERLQQQIESTKNMAR 787          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig110630.2232.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A5A8D944_CAFRO2.680e-4548.89Uncharacterized protein n=3 Tax=Cafeteria roenberg... [more]
A0A7S1XLS6_9STRA1.150e-2738.15Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
F0XY57_AURAN3.010e-2538.17Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A2D4BW29_PYTIN2.050e-2435.29Heat shock protein 70 putative n=1 Tax=Pythium ins... [more]
A0A8J2SJ65_9STRA7.680e-2335.91Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A830HGY9_9CHLO3.190e-1732.24Uncharacterized protein n=1 Tax=Pycnococcus provas... [more]
A0A5K3EKN5_MESCO5.010e-1034.09Uncharacterized protein n=3 Tax=Mesocestoides cort... [more]
A0A5B8MKD7_9CHLO9.140e-1027.93Heat shock protein Hsp70 n=2 Tax=Chloropicon primu... [more]
A0A0R3WNM4_HYDTA1.440e-930.11Uncharacterized protein n=1 Tax=Hydatigena taeniae... [more]
A0A0G2E792_9EURO3.920e-537.37Putative hsp70 family chaperone lhs1 n=1 Tax=Phaeo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig110630contigM-pyrifera_M_contig110630:3..563 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score116.3
Seed ortholog evalue1.5e-23
Seed eggNOG ortholog44056.XP_009033151.1
Preferred nameHSPA4L
KEGG koko:K09485,ko:K09489
KEGG TC1.A.33
KEGG Pathwayko04141,ko04530,ko04612,map04141,map04530,map04612
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000774,GO:0001085,GO:0001655,GO:0001822,GO:0001932,GO:0001933,GO:0001934,GO:0002682,GO:0002684,GO:0002694,GO:0002696,GO:0003674,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005576,GO:0005615,GO:0005618,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005811,GO:0005829,GO:0005844,GO:0005886,GO:0005911,GO:0006355,GO:0006357,GO:0006457,GO:0006458,GO:0006605,GO:0006626,GO:0006810,GO:0006839,GO:0006886,GO:0006897,GO:0006898,GO:0006950,GO:0006986,GO:0006996,GO:0007005,GO:0007006,GO:0007275,GO:0007568,GO:0008092,GO:0008104,GO:0008134,GO:0008144,GO:0008150,GO:0008340,GO:0009266,GO:0009405,GO:0009408,GO:0009506,GO:0009628,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009966,GO:0009968,GO:0009987,GO:0010033,GO:0010035,GO:0010038,GO:0010259,GO:0010468,GO:0010556,GO:0010557,GO:0010562,GO:0010563,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010646,GO:0010648,GO:0010941,GO:0015031,GO:0015631,GO:0015833,GO:0016020,GO:0016043,GO:0016192,GO:0017038,GO:0017076,GO:0019219,GO:0019220,GO:0019222,GO:0022407,GO:0022409,GO:0022603,GO:0022607,GO:0023051,GO:0023057,GO:0030054,GO:0030139,GO:0030155,GO:0030234,GO:0030312,GO:0030554,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031399,GO:0031400,GO:0031401,GO:0031410,GO:0031974,GO:0031981,GO:0031982,GO:0031983,GO:0032092,GO:0032268,GO:0032269,GO:0032270,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032872,GO:0032873,GO:0032879,GO:0032880,GO:0032886,GO:0032991,GO:0033036,GO:0033043,GO:0033218,GO:0033365,GO:0033613,GO:0033674,GO:0034613,GO:0034622,GO:0035639,GO:0035690,GO:0035966,GO:0036094,GO:0042026,GO:0042221,GO:0042277,GO:0042325,GO:0042326,GO:0042327,GO:0042493,GO:0042886,GO:0042981,GO:0043014,GO:0043066,GO:0043067,GO:0043069,GO:0043085,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043230,GO:0043231,GO:0043232,GO:0043233,GO:0043392,GO:0043393,GO:0043408,GO:0043409,GO:0043523,GO:0043524,GO:0043549,GO:0043933,GO:0044085,GO:0044092,GO:0044093,GO:0044419,GO:0044421,GO:0044422,GO:0044424,GO:0044428,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0044877,GO:0045040,GO:0045184,GO:0045343,GO:0045345,GO:0045765,GO:0045766,GO:0045785,GO:0045859,GO:0045860,GO:0045893,GO:0045935,GO:0045936,GO:0045937,GO:0045944,GO:0046634,GO:0046635,GO:0046686,GO:0046907,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0048731,GO:0048856,GO:0050730,GO:0050731,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050863,GO:0050865,GO:0050867,GO:0050870,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051094,GO:0051098,GO:0051099,GO:0051100,GO:0051101,GO:0051128,GO:0051131,GO:0051133,GO:0051135,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051248,GO:0051249,GO:0051251,GO:0051252,GO:0051254,GO:0051338,GO:0051347,GO:0051493,GO:0051641,GO:0051649,GO:0051704,GO:0051716,GO:0055044,GO:0060205,GO:0060255,GO:0060341,GO:0060548,GO:0060589,GO:0060590,GO:0061024,GO:0061077,GO:0061097,GO:0061098,GO:0065003,GO:0065007,GO:0065009,GO:0070013,GO:0070062,GO:0070201,GO:0070302,GO:0070303,GO:0070507,GO:0070585,GO:0070727,GO:0070887,GO:0071682,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0072001,GO:0072594,GO:0072655,GO:0072657,GO:0080090,GO:0080134,GO:0080135,GO:0090150,GO:0090151,GO:0097159,GO:0097367,GO:0097708,GO:0098657,GO:0098772,GO:1900034,GO:1900407,GO:1900408,GO:1900744,GO:1901031,GO:1901032,GO:1901214,GO:1901215,GO:1901265,GO:1901298,GO:1901299,GO:1901342,GO:1901363,GO:1902175,GO:1902176,GO:1902531,GO:1902532,GO:1902680,GO:1902882,GO:1902883,GO:1903037,GO:1903039,GO:1903201,GO:1903202,GO:1903205,GO:1903206,GO:1903506,GO:1903508,GO:1903561,GO:1903747,GO:1903748,GO:1903750,GO:1903751,GO:1903753,GO:1903827,GO:1903828,GO:1904018,GO:1904950,GO:1990904,GO:2000026,GO:2000112,GO:2001023,GO:2001024,GO:2001038,GO:2001039,GO:2001141,GO:2001233,GO:2001234,GO:2001242,GO:2001243
EggNOG free text desc.ATP binding
EggNOG OGsCOG0443@1,KOG0103@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03110
Exons1
Model size561
Cds size561
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815618.1474051-CDS-M-pyrifera_M_contig110630:2..5631622815618.1474051-CDS-M-pyrifera_M_contig110630:2..563Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig110630 3..563 +
1692277489.979899-CDS-M-pyrifera_M_contig110630:2..5631692277489.979899-CDS-M-pyrifera_M_contig110630:2..563Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig110630 3..563 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig110630.2232.1prot_M-pyrifera_M_contig110630.2232.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig110630 3..563 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig110630.2232.1

>prot_M-pyrifera_M_contig110630.2232.1 ID=prot_M-pyrifera_M_contig110630.2232.1|Name=mRNA_M-pyrifera_M_contig110630.2232.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=187bp
DDIIAATHAKRNELEAFIYKARDDFGDGGELRPFVDRERADEFVGGLMDE
EDWVCYGDGCDADLDTLSARLTNLQSFTTPAYKRKWEAEHRDAASAELVA
AIERYQEISRSTDQTYDHLEESDRDTLRAACREAEVWLRKAQDDQMSLRG
DQDPAFTVADIRKHMDTLKRECEPIATRPKPAPKKES
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mRNA from alignment at M-pyrifera_M_contig110630:3..563+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig110630.2232.1 ID=mRNA_M-pyrifera_M_contig110630.2232.1|Name=mRNA_M-pyrifera_M_contig110630.2232.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=561bp|location=Sequence derived from alignment at M-pyrifera_M_contig110630:3..563+ (Macrocystis pyrifera P11B4 male)
GATGACATCATTGCAGCAACACATGCCAAGAGGAATGAGCTTGAAGCATT TATCTACAAAGCACGTGATGATTTTGGTGATGGAGGTGAGTTGCGTCCAT TTGTTGATCGTGAACGTGCTGATGAGTTTGTGGGTGGATTGATGGATGAG GAAGATTGGGTATGTTATGGAGATGGCTGTGATGCTGATTTGGACACACT CTCTGCCCGTCTGACAAACTTGCAATCCTTCACAACCCCAGCGTACAAGC GGAAATGGGAAGCTGAACATCGTGATGCAGCATCTGCTGAATTGGTTGCA GCGATTGAGCGATACCAAGAAATCTCACGATCAACCGACCAAACGTATGA TCATTTGGAGGAAAGTGACCGTGATACTTTGCGTGCTGCTTGCCGTGAAG CAGAAGTGTGGCTTCGCAAAGCCCAAGATGATCAAATGTCTCTCCGTGGT GACCAAGATCCAGCATTCACTGTTGCTGACATTCGAAAGCACATGGATAC ATTGAAGCGCGAATGTGAACCAATTGCAACTCGTCCAAAACCAGCACCAA AGAAGGAATCA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig110630:3..563+

>mRNA_M-pyrifera_M_contig110630.2232.1 ID=mRNA_M-pyrifera_M_contig110630.2232.1|Name=mRNA_M-pyrifera_M_contig110630.2232.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1122bp|location=Sequence derived from alignment at M-pyrifera_M_contig110630:3..563+ (Macrocystis pyrifera P11B4 male)
GATGACATCATTGCAGCAACACATGCCAAGAGGAATGAGCTTGAAGCATT
TATCTACAAAGCACGTGATGATTTTGGTGATGGAGGTGAGTTGCGTCCAT
TTGTTGATCGTGAACGTGCTGATGAGTTTGTGGGTGGATTGATGGATGAG
GAAGATTGGGTATGTTATGGAGATGGCTGTGATGCTGATTTGGACACACT
CTCTGCCCGTCTGACAAACTTGCAATCCTTCACAACCCCAGCGTACAAGC
GGAAATGGGAAGCTGAACATCGTGATGCAGCATCTGCTGAATTGGTTGCA
GCGATTGAGCGATACCAAGAAATCTCACGATCAACCGACCAAACGTATGA
TCATTTGGAGGAAAGTGACCGTGATACTTTGCGTGCTGCTTGCCGTGAAG
CAGAAGTGTGGCTTCGCAAAGCCCAAGATGATCAAATGTCTCTCCGTGGT
GACCAAGATCCAGCATTCACTGTTGCTGACATTCGAAAGCACATGGATAC
ATTGAAGCGCGAATGTGAACCAATTGCAACTCGTCCAAAACCAGCACCAA
AGAAGGAATCAGATGACATCATTGCAGCAACACATGCCAAGAGGAATGAG
CTTGAAGCATTTATCTACAAAGCACGTGATGATTTTGGTGATGGAGGTGA
GTTGCGTCCATTTGTTGATCGTGAACGTGCTGATGAGTTTGTGGGTGGAT
TGATGGATGAGGAAGATTGGGTATGTTATGGAGATGGCTGTGATGCTGAT
TTGGACACACTCTCTGCCCGTCTGACAAACTTGCAATCCTTCACAACCCC
AGCGTACAAGCGGAAATGGGAAGCTGAACATCGTGATGCAGCATCTGCTG
AATTGGTTGCAGCGATTGAGCGATACCAAGAAATCTCACGATCAACCGAC
CAAACGTATGATCATTTGGAGGAAAGTGACCGTGATACTTTGCGTGCTGC
TTGCCGTGAAGCAGAAGTGTGGCTTCGCAAAGCCCAAGATGATCAAATGT
CTCTCCGTGGTGACCAAGATCCAGCATTCACTGTTGCTGACATTCGAAAG
CACATGGATACATTGAAGCGCGAATGTGAACCAATTGCAACTCGTCCAAA
ACCAGCACCAAAGAAGGAATCA
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