mRNA_M-pyrifera_M_contig1106.2221.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig1106.2221.1
Unique NamemRNA_M-pyrifera_M_contig1106.2221.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig1106.2221.1 vs. uniprot
Match: D7FKW8_ECTSI (SAS-6_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKW8_ECTSI)

HSP 1 Score: 371 bits (952), Expect = 3.260e-129
Identity = 189/206 (91.75%), Postives = 198/206 (96.12%), Query Frame = 1 
Query:    4 VQTFDFGSIEEMDPSVADGFRVIYDREVPFELRVQESADGPQQVGTLEAIKVKVLLLGDDSAPQSVRVELSSEADLFYHYTHLTDQPSFQVMQDDQKLMVEFQDYPNVLIRMLNNCIKEPHSHLAVFVMQHDVNARLDFIQNMEYKFVELMSLEYTRSPEDTVQHQITYRYNAMKSRLALMQARLQEVNNLVKLKNPSLLLQLQSR 621
            +QT DFG+IEEMDPS+ADGFRVIYDREVPFELRVQESADGPQQVGTLEAIKVKVL+LGDD+APQSVRVELSSEADLF+HYTH  D  SFQVMQ++QKLMVEFQDYPNVLIRMLNNCIKEPHSHL VFVMQHDVNARLDFIQNMEYKFVELMSL+YTRS ED VQHQITYRYNAMKSRLALMQARLQEVNNLVKLKNPSLLLQLQSR
Sbjct:    5 LQTCDFGAIEEMDPSIADGFRVIYDREVPFELRVQESADGPQQVGTLEAIKVKVLMLGDDAAPQSVRVELSSEADLFFHYTHSIDDASFQVMQEEQKLMVEFQDYPNVLIRMLNNCIKEPHSHLVVFVMQHDVNARLDFIQNMEYKFVELMSLQYTRSAEDIVQHQITYRYNAMKSRLALMQARLQEVNNLVKLKNPSLLLQLQSR 210
[Close]
BLAST of mRNA_M-pyrifera_M_contig1106.2221.1 vs. uniprot
Match: A0A835YXQ7_9STRA (SAS-6_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXQ7_9STRA)

HSP 1 Score: 327 bits (837), Expect = 1.540e-111
Identity = 160/204 (78.43%), Postives = 186/204 (91.18%), Query Frame = 1 
Query:    4 VQTFDFGSIEEMDPSVADGFRVIYDREVPFELRVQESADGPQQVGTLEAIKVKVLLLGDDSAPQSVRVELSSEADLFYHYTHLTDQPSFQVMQDDQKLMVEFQDYPNVLIRMLNNCIKEPHSHLAVFVMQHDVNARLDFIQNMEYKFVELMSLEYTRSPEDTVQHQITYRYNAMKSRLALMQARLQEVNNLVKLKNPSLLLQLQ 615
            +QTF++ SIE+MDPSVADGFR++YDREVPFELRVQ+ ADGPQ VGTLEAIKVKVL+LGD + PQ VRVELSSEADLF+HY H+ D+ +F  MQ+ Q+L ++F DYP VLIRMLN CI+EPHSHLAV+VMQH+++ARLDFIQNMEYKF+EL+SL +TRSPED VQHQITYRYNAMKSRLALMQARLQ+VNNLVKLKNPSLLLQLQ
Sbjct:    1 MQTFEYTSIEDMDPSVADGFRIVYDREVPFELRVQDGADGPQHVGTLEAIKVKVLVLGDGALPQGVRVELSSEADLFFHYMHVVDEGAFAAMQEQQRLTLDFADYPAVLIRMLNQCIREPHSHLAVYVMQHELDARLDFIQNMEYKFIELLSLHFTRSPEDVVQHQITYRYNAMKSRLALMQARLQDVNNLVKLKNPSLLLQLQ 204
[Close]
BLAST of mRNA_M-pyrifera_M_contig1106.2221.1 vs. uniprot
Match: A0A6V2Z9A0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2Z9A0_HETAK)

HSP 1 Score: 322 bits (826), Expect = 1.220e-109
Identity = 161/205 (78.54%), Postives = 184/205 (89.76%), Query Frame = 1 
Query:    1 MVQTFDFGSIEEMDPSVADGFRVIYDREVPFELRVQESADGPQQVGTLEAIKVKVLLLGDDSAPQSVRVELSSEADLFYHYTHLTDQPSFQVMQDDQKLMVEFQDYPNVLIRMLNNCIKEPHSHLAVFVMQHDVNARLDFIQNMEYKFVELMSLEYTRSPEDTVQHQITYRYNAMKSRLALMQARLQEVNNLVKLKNPSLLLQLQ 615
            ++QT DF SIEEMDPS+ DG R+IYDREVPFELRVQ+SADGPQQVGTLEAIKVK+L+LG+D+AP SVRVE SSEADLF+HYTH  D   FQV+Q+ Q+LMVEF DYPNVLIRMLN CI+EPH+HLAVFVMQ DV ARLDFIQNMEYKFVELM+  + RS E+ VQ+QITYRYNAMKS+LALMQ+R+QEVNNLVK+KNPSLLLQLQ
Sbjct:   26 IMQTLDFTSIEEMDPSIEDGHRIIYDREVPFELRVQDSADGPQQVGTLEAIKVKILILGEDAAPSSVRVECSSEADLFFHYTHQLDSQGFQVVQEQQRLMVEFPDYPNVLIRMLNACIQEPHAHLAVFVMQRDVAARLDFIQNMEYKFVELMTCHFARSTEEVVQYQITYRYNAMKSKLALMQSRMQEVNNLVKMKNPSLLLQLQ 230
[Close]
BLAST of mRNA_M-pyrifera_M_contig1106.2221.1 vs. uniprot
Match: A0A7S1XUL9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XUL9_9STRA)

HSP 1 Score: 319 bits (817), Expect = 2.970e-108
Identity = 159/204 (77.94%), Postives = 179/204 (87.75%), Query Frame = 1 
Query:    4 VQTFDFGSIEEMDPSVADGFRVIYDREVPFELRVQESADGPQQVGTLEAIKVKVLLLGDDSAPQSVRVELSSEADLFYHYTHLTDQPSFQVMQDDQKLMVEFQDYPNVLIRMLNNCIKEPHSHLAVFVMQHDVNARLDFIQNMEYKFVELMSLEYTRSPEDTVQHQITYRYNAMKSRLALMQARLQEVNNLVKLKNPSLLLQLQ 615
            +QTFD  +IEEMDPS A+GF VIYDREVPFELRVQ++ DGP QVGTLEAIKVK+LL GDD+ P +VR+ELSSEADLFYHY HL D+  FQV+Q+ QKLMVEF DYPNVLIRMLNNCI+EPH+HLAVFVMQ D  ARLDFIQNMEYKFVELMS  + RS E++VQH ITYRYNAMK+RLALMQARL EV N++KLKNPSLLLQLQ
Sbjct:   12 LQTFDMSAIEEMDPSCAEGFNVIYDREVPFELRVQQNQDGPSQVGTLEAIKVKILLQGDDARPSAVRIELSSEADLFYHYAHLIDEAGFQVVQEQQKLMVEFADYPNVLIRMLNNCIREPHNHLAVFVMQQDGTARLDFIQNMEYKFVELMSCHFARSSEESVQHHITYRYNAMKTRLALMQARLTEVQNVIKLKNPSLLLQLQ 215
[Close]
BLAST of mRNA_M-pyrifera_M_contig1106.2221.1 vs. uniprot
Match: A0A7S2UUP1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUP1_9STRA)

HSP 1 Score: 315 bits (808), Expect = 7.720e-107
Identity = 160/205 (78.05%), Postives = 180/205 (87.80%), Query Frame = 1 
Query:    1 MVQTFDFGSIEEMDPSVADGFRVIYDREVPFELRVQESADGPQQVGTLEAIKVKVLLLGDDSAPQSVRVELSSEADLFYHYTHLTDQPSFQVMQDDQKLMVEFQDYPNVLIRMLNNCIKEPHSHLAVFVMQHDVNARLDFIQNMEYKFVELMSLEYTRSPEDTVQHQITYRYNAMKSRLALMQARLQEVNNLVKLKNPSLLLQLQ 615
            ++QT DF +IEEMDPSV DG RVIYDREVPFE+R+Q+SA+ PQQVGTLEAIKVKVLLLGDD+ P+SVR+ELSSEADLF+HY H  D   F+ +QD Q+LMVEF DYPNVLIRMLNNCIKEPHS LAVFVMQ DV+ARLDFIQNMEYKFVELM+  +  SPED+VQ  ITYRY +MKSRLALMQ RLQEVNNLVK+KNPSLLLQLQ
Sbjct:   23 LMQTLDFSAIEEMDPSVVDGHRVIYDREVPFEVRLQDSAEAPQQVGTLEAIKVKVLLLGDDANPESVRIELSSEADLFFHYYHQLDLTGFKTVQDQQRLMVEFPDYPNVLIRMLNNCIKEPHSCLAVFVMQQDVHARLDFIQNMEYKFVELMTCHFVHSPEDSVQRHITYRYKSMKSRLALMQNRLQEVNNLVKMKNPSLLLQLQ 227
[Close]
BLAST of mRNA_M-pyrifera_M_contig1106.2221.1 vs. uniprot
Match: A0A7S0F8G2_9DINO (Hypothetical protein (Fragment) n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0F8G2_9DINO)

HSP 1 Score: 282 bits (722), Expect = 1.400e-93
Identity = 138/204 (67.65%), Postives = 174/204 (85.29%), Query Frame = 1 
Query:    4 VQTFDFGSIEEMDPSVADGFRVIYDREVPFELRVQESADGPQQVGTLEAIKVKVLLLGDDSAPQSVRVELSSEADLFYHYTHLTDQPSFQVMQDDQKLMVEFQDYPNVLIRMLNNCIKEPHSHLAVFVMQHDVNARLDFIQNMEYKFVELMSLEYTRSPEDTVQHQITYRYNAMKSRLALMQARLQEVNNLVKLKNPSLLLQLQ 615
            +  FDF +IEEMDPS+A+G RV+YDREVPFELRVQ++  GPQ+VGTLEA+K K+L LG++  PQ  R+EL+SE DLF+HYTH  D+  F+ MQ+ QKLM++FQ+Y  VLI+MLNNCIKEPHS+LAVF+MQ D +ARLDFIQNMEYKFVEL+S ++  S E+ V+ QIT+RYN++KSRLALMQARLQ++N LVK+KNPSLLLQLQ
Sbjct:   38 LDAFDFTAIEEMDPSLAEGHRVVYDREVPFELRVQDADTGPQEVGTLEAVKCKILALGEEQTPQHCRIELTSENDLFFHYTHGVDEHGFRSMQEHQKLMIDFQEYSAVLIKMLNNCIKEPHSYLAVFIMQRDGHARLDFIQNMEYKFVELLSCDFIASSEEVVRQQITFRYNSVKSRLALMQARLQDINALVKVKNPSLLLQLQ 241
[Close]
BLAST of mRNA_M-pyrifera_M_contig1106.2221.1 vs. uniprot
Match: A0A7S3KUF3_EUPCR (Hypothetical protein n=1 Tax=Euplotes crassus TaxID=5936 RepID=A0A7S3KUF3_EUPCR)

HSP 1 Score: 281 bits (719), Expect = 1.900e-93
Identity = 132/205 (64.39%), Postives = 178/205 (86.83%), Query Frame = 1 
Query:    1 MVQTFDFGSIEEMDPSVADGFRVIYDREVPFELRVQESADGPQQVGTLEAIKVKVLLLGDDSAPQSVRVELSSEADLFYHYTHLTDQPSFQVMQDDQKLMVEFQDYPNVLIRMLNNCIKEPHSHLAVFVMQHDVNARLDFIQNMEYKFVELMSLEYTRSPEDTVQHQITYRYNAMKSRLALMQARLQEVNNLVKLKNPSLLLQLQ 615
            ++  FDF +I+EMDPS+++G R++Y+REVPFELR+Q+   GPQ+VGTLEAIKVK+L+LG+D  P+ ++VELSSE D+F+HYTH  ++ SF  +Q+ QKLMV++ DYPN+LI+MLN+CIKEPHS LAVF+MQ D +ARLDFIQNMEYKFVEL+S ++  S E+T++ QIT+RYNA+KS+LA+MQARLQ++N +VK+KNPSLLLQLQ
Sbjct:   10 VLNAFDFQAIDEMDPSLSEGHRIVYEREVPFELRIQDGDTGPQEVGTLEAIKVKILVLGEDGNPEQIKVELSSENDMFFHYTHNIEELSFSKVQESQKLMVDYPDYPNILIKMLNSCIKEPHSFLAVFIMQRDGSARLDFIQNMEYKFVELLSCDFDASTEETIRQQITFRYNAVKSKLAIMQARLQDINAIVKVKNPSLLLQLQ 214
[Close]
BLAST of mRNA_M-pyrifera_M_contig1106.2221.1 vs. uniprot
Match: A0A7S3JM65_9SPIT (Hypothetical protein n=1 Tax=Euplotes harpa TaxID=151035 RepID=A0A7S3JM65_9SPIT)

HSP 1 Score: 281 bits (718), Expect = 3.310e-93
Identity = 131/207 (63.29%), Postives = 180/207 (86.96%), Query Frame = 1 
Query:    1 MVQTFDFGSIEEMDPSVADGFRVIYDREVPFELRVQESADGPQQVGTLEAIKVKVLLLGDDSAPQSVRVELSSEADLFYHYTHLTDQPSFQVMQDDQKLMVEFQDYPNVLIRMLNNCIKEPHSHLAVFVMQHDVNARLDFIQNMEYKFVELMSLEYTRSPEDTVQHQITYRYNAMKSRLALMQARLQEVNNLVKLKNPSLLLQLQSR 621
            ++  FDF +I+EMDPS+A+G ++ Y+REVPFELR+QES  GPQ+VGTLEAIKVK+L+LGD+   ++++VEL+SE D+F+HYTH   + SF+++Q+DQKLM+EF DY N+LI+MLN+CIKEPHS LAVF+MQ D +ARLDFIQNMEYKFVEL+S+++  S E+ ++ QIT+RYN++KS+LA+MQARLQ++N +VK+KNPSLLLQLQ +
Sbjct:   11 LLNAFDFRAIDEMDPSLAEGHKLYYEREVPFELRIQESEGGPQEVGTLEAIKVKILVLGDEGNIENIKVELTSENDMFFHYTHSLTEDSFKIVQEDQKLMIEFNDYSNILIKMLNSCIKEPHSFLAVFIMQRDGSARLDFIQNMEYKFVELLSMDFNASSEEVIRQQITFRYNSVKSKLAIMQARLQDINAIVKIKNPSLLLQLQKQ 217
[Close]
BLAST of mRNA_M-pyrifera_M_contig1106.2221.1 vs. uniprot
Match: A0A8J1ZE14_9DINO (Hypothetical protein n=2 Tax=unclassified Amoebophrya TaxID=2558461 RepID=A0A8J1ZE14_9DINO)

HSP 1 Score: 279 bits (713), Expect = 1.500e-92
Identity = 136/204 (66.67%), Postives = 173/204 (84.80%), Query Frame = 1 
Query:    4 VQTFDFGSIEEMDPSVADGFRVIYDREVPFELRVQESADGPQQVGTLEAIKVKVLLLGDDSAPQSVRVELSSEADLFYHYTHLTDQPSFQVMQDDQKLMVEFQDYPNVLIRMLNNCIKEPHSHLAVFVMQHDVNARLDFIQNMEYKFVELMSLEYTRSPEDTVQHQITYRYNAMKSRLALMQARLQEVNNLVKLKNPSLLLQLQ 615
            + +FDF +IEEMDPS+ +G RV YDRE PFELRVQ++  GPQ+VGTLEAIK K+LLLGD+  P  +R+EL+SE DLF+HYTH  D+  F+ MQ+ QKLM++F DY +V+I+MLNNCIKEPHS LAVFVMQ D +ARLDFIQNMEYKFVEL+S ++  SPE+ V+ QI++RYN++K++L+LMQARLQ+VN LVK+KNPSLLLQLQ
Sbjct:   13 LDSFDFTAIEEMDPSLTEGHRVTYDRECPFELRVQDADTGPQEVGTLEAIKCKILLLGDEQQPNHIRIELTSENDLFFHYTHSVDEQGFRQMQESQKLMIDFPDYCSVVIKMLNNCIKEPHSFLAVFVMQRDGHARLDFIQNMEYKFVELLSCDFVASPEEVVRQQISFRYNSVKTKLSLMQARLQDVNALVKVKNPSLLLQLQ 216
[Close]
BLAST of mRNA_M-pyrifera_M_contig1106.2221.1 vs. uniprot
Match: A0A0G4EEE0_VITBC (SAS-6_N domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EEE0_VITBC)

HSP 1 Score: 278 bits (712), Expect = 1.210e-91
Identity = 139/206 (67.48%), Postives = 176/206 (85.44%), Query Frame = 1 
Query:    1 MVQTFDFGSIEEMDPSVADGFRVIYDREVPFELRVQES-ADGPQQVGTLEAIKVKVLLLGDDSAPQSVRVELSSEADLFYHYTHLTDQPSFQVMQDDQKLMVEFQDYPNVLIRMLNNCIKEPHSHLAVFVMQHDVNARLDFIQNMEYKFVELMSLEYTRSPEDTVQHQITYRYNAMKSRLALMQARLQEVNNLVKLKNPSLLLQLQ 615
            M+ TFDF +IE MDPS+A+G RV+YDRE PFELRVQES A+ PQ+VGTLEAIK K+LLLGD + PQ VRV+L+SE DLF+HYTH  ++ SF+ MQ+ QKLM+EF DY NVL++MLN+CIK PHS LAV +++ D  A+LD IQNMEYKFVEL+SL++T SPE+ V+ QIT+RYN++KS++ALMQARLQ++N LVK+KNPSLLLQLQ
Sbjct:   37 MLSTFDFTAIESMDPSLAEGHRVVYDRECPFELRVQESDANAPQEVGTLEAIKCKILLLGDQACPQHVRVDLTSENDLFFHYTHSVNESSFRGMQEAQKLMIEFPDYMNVLVKMLNSCIKSPHSFLAVLLLKRDGKAQLDIIQNMEYKFVELLSLDFTASPEEVVRQQITFRYNSLKSKVALMQARLQDINALVKVKNPSLLLQLQ 242
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1106.2221.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKW8_ECTSI3.260e-12991.75SAS-6_N domain-containing protein n=2 Tax=Ectocarp... [more]
A0A835YXQ7_9STRA1.540e-11178.43SAS-6_N domain-containing protein n=1 Tax=Tribonem... [more]
A0A6V2Z9A0_HETAK1.220e-10978.54Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1XUL9_9STRA2.970e-10877.94Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2UUP1_9STRA7.720e-10778.05Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S0F8G2_9DINO1.400e-9367.65Hypothetical protein (Fragment) n=1 Tax=Pyrodinium... [more]
A0A7S3KUF3_EUPCR1.900e-9364.39Hypothetical protein n=1 Tax=Euplotes crassus TaxI... [more]
A0A7S3JM65_9SPIT3.310e-9363.29Hypothetical protein n=1 Tax=Euplotes harpa TaxID=... [more]
A0A8J1ZE14_9DINO1.500e-9266.67Hypothetical protein n=2 Tax=unclassified Amoeboph... [more]
A0A0G4EEE0_VITBC1.210e-9167.48SAS-6_N domain-containing protein n=2 Tax=Vitrella... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig1106contigM-pyrifera_M_contig1106:22406..28096 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score375.9
Seed ortholog evalue1.2e-101
Seed eggNOG ortholog2880.D7FKW8
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Centriolar protein SAS N-terminal
EggNOG OGs299C8@1,2RGE2@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size624
Cds size624
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig1106.2221.1prot_M-pyrifera_M_contig1106.2221.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig1106 22406..28096 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815617.5924194-CDS-M-pyrifera_M_contig1106:22405..225011622815617.5924194-CDS-M-pyrifera_M_contig1106:22405..22501Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1106 22406..22501 -
1692277489.7506087-CDS-M-pyrifera_M_contig1106:22405..225011692277489.7506087-CDS-M-pyrifera_M_contig1106:22405..22501Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1106 22406..22501 -
1622815617.607623-CDS-M-pyrifera_M_contig1106:23342..234441622815617.607623-CDS-M-pyrifera_M_contig1106:23342..23444Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1106 23343..23444 -
1692277489.7602408-CDS-M-pyrifera_M_contig1106:23342..234441692277489.7602408-CDS-M-pyrifera_M_contig1106:23342..23444Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1106 23343..23444 -
1622815617.6202888-CDS-M-pyrifera_M_contig1106:24360..245131622815617.6202888-CDS-M-pyrifera_M_contig1106:24360..24513Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1106 24361..24513 -
1692277489.76823-CDS-M-pyrifera_M_contig1106:24360..245131692277489.76823-CDS-M-pyrifera_M_contig1106:24360..24513Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1106 24361..24513 -
1622815617.6311226-CDS-M-pyrifera_M_contig1106:25405..255041622815617.6311226-CDS-M-pyrifera_M_contig1106:25405..25504Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1106 25406..25504 -
1692277489.7766292-CDS-M-pyrifera_M_contig1106:25405..255041692277489.7766292-CDS-M-pyrifera_M_contig1106:25405..25504Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1106 25406..25504 -
1622815617.6476128-CDS-M-pyrifera_M_contig1106:26461..265831622815617.6476128-CDS-M-pyrifera_M_contig1106:26461..26583Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1106 26462..26583 -
1692277489.785248-CDS-M-pyrifera_M_contig1106:26461..265831692277489.785248-CDS-M-pyrifera_M_contig1106:26461..26583Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1106 26462..26583 -
1622815617.6614757-CDS-M-pyrifera_M_contig1106:28044..280961622815617.6614757-CDS-M-pyrifera_M_contig1106:28044..28096Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1106 28045..28096 -
1692277489.7958796-CDS-M-pyrifera_M_contig1106:28044..280961692277489.7958796-CDS-M-pyrifera_M_contig1106:28044..28096Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1106 28045..28096 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig1106.2221.1

>prot_M-pyrifera_M_contig1106.2221.1 ID=prot_M-pyrifera_M_contig1106.2221.1|Name=mRNA_M-pyrifera_M_contig1106.2221.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=208bp
MVQTFDFGSIEEMDPSVADGFRVIYDREVPFELRVQESADGPQQVGTLEA
IKVKVLLLGDDSAPQSVRVELSSEADLFYHYTHLTDQPSFQVMQDDQKLM
VEFQDYPNVLIRMLNNCIKEPHSHLAVFVMQHDVNARLDFIQNMEYKFVE
LMSLEYTRSPEDTVQHQITYRYNAMKSRLALMQARLQEVNNLVKLKNPSL
LLQLQSR*
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mRNA from alignment at M-pyrifera_M_contig1106:22406..28096-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig1106.2221.1 ID=mRNA_M-pyrifera_M_contig1106.2221.1|Name=mRNA_M-pyrifera_M_contig1106.2221.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=5691bp|location=Sequence derived from alignment at M-pyrifera_M_contig1106:22406..28096- (Macrocystis pyrifera P11B4 male)
ATGGTCCAAACCTTCGACTTCGGGTCCATTGAGGAGATGGATCCATCAGT
CGGTGAGCTGCTTACTTCGTGCTTTACTCATTCGACTCATTCGGCAATTG
AGGGGTAACCGCCCGATTCCTCTTCAGGACAAGTACGATATACCTCGGTG
TTCATATCATACATCATACCGGGGTACAGCACGTACGTACTCGTAGTACA
GTGACTCCTGTATGATACGGACAGGTTGCCTCCGGTCATATCGCGGAAAG
CAACGTTTTCAAAGCTCCCAACTACTCTTAATATCATTGTATTCGTAAGG
AGGAGAGCTCGCCCTGCCTCCCTCCTTTCGAGTGACTGTGGCACCTCTGT
CACAAGAATACACCCTTCATGCCATCGAGGTACTACAGTTGTACTGTACT
GTGTAGTGCATGCAGCAGCAGGTACAACAAATCATGTACCAGGTATGCAG
CAGTACCTGAGACTGCTGCATACCTTATACCTGGTATCTGGTATGCGTAT
ATACGATATGCCTACGCACTTACTTACGTGAAAACGATTGAGGTCGTACA
ATCCAACCAATGTGTCCACCCATCACATAAATGCATACGTGGGGGTTGGA
CGTTGGAGCACATTATATTTATGCGACTGCCGTTTGACATACTGCACCAA
ACAGGTGAAACATTCAAAGTCGTACACTTCGCAAACAAACGGAGATGTAC
ATCATCAGTAGTCTATCTTTCATATCACATATCGGGTATGTACCCACCCG
CACACCTTCTCGGCTACTTATTATGGTACTGCTTTGAATAAGGTTGAAAT
GCCGGTAATTACCTGGGTTCACCTTGGCCTTAACAAACTGCTGCACTTTC
GTTGAGAGATGTCATCTCGTCATCTCGCCCTAGCTCGTGATTTCGTCATG
CTGTTATGAGGCTTAGAGTGGGTAGGCGTTTGGTTAACCTTTTACCTTTA
GCCCAACGGACTAAGTAAGACCTTAACAGATGGCGACGACGGCAGAACAT
GGGTCGTTGGTCGTGAGTTCGAATCTCACGTCCACCATGAAATCGCTTTT
TAAGAAAAAAAGTGAATTTCCTCATGTCAAGAACTTGAAAAAATACATCT
GGATCCCCAGAAATTGGAACCGCGTGTTGGTGTCACGCGTCGACCCGTAT
ATATATCCGGTCCGTTCCAGGGGGGGAGAGTGCTATGAGGCTTATATTGG
GTAGGCGATTGGTTAACCTTTTACCTTTAGCCCAACGGACTAAGACCTTA
CTTAACAATACCGTATTTTCCACTCGGTGCGCAGACATGGGGGGGGGAAT
CACATTATTTACCAAGCTTGCGCTCTTCTTGCTTGTGCCATCGCAGTGTT
TGTAAGCTGCAGTTCACACTACGGATGGGCCTTTGCTTCAACAACTTGAA
AAAAACTACCCTTGTCTTCGTACTGTATGCAAGTTATTCATGTGGGCGTT
ATCCCTGTTCCCCTTTCCGGTTGGGTTTCTATTTCTACATGAACACCTGT
ATCATGTCACCAGCGGACGGATTTCGCGTCATCTATGACCGTGAAGTCCC
CTTTGAGCTGAGAGTGCAGGAGTCAGCTGATGGCCCGCAGCAGGTCGGCA
CTCTCGAGGCGATTAAGGTCAAGGTACTTCTGCTGGTAAGAAGCAGGACG
CAGGACAGCATGCTTGTGGTTCGGGTAGTTGACATGTTTGTTTTTGGCTC
GACGGCTCGGCTACGTGTGGCAATGGGGCGAAATAATTTCGACGTTACGT
TACGTGATCCATAATACTTGACTACAGTACTGTGACTGGAACTACTTATA
CTACTGCCGTTGTAGCATCAGCGTTTCTATATATAGAGCGTTCTTTGTAG
GAGCTGCGTACAGCAGTATCGCTGCAGTTCAGTTATTAGTATCAATAGTA
GAGCTTGAAGCTAACGCATAAATTATATTAAATAATAGTAAGAAATACGT
TTATGTGAAAGTCGCCGAAATAGAGTGAATTTCAAAGAAATACTCTCTCG
CCTATCCCGATCCCGTCTAGAGTATCATATGCACACCGGATCATGCTCGG
CAACGAAGCTATAATATTCGATGGGGCGCAAGACCAAAGCGTCGTACAAG
ATCCGAACGCATACACTTCGATACTCATGCGCGGTCTATTTTACGTTCTT
GTGTACTGTTCGAAGTGCGCTCGTTGTTCGTTTATAAAGGATAAACCACT
GAGCTACTCAGTCCCACTGAGCTTAGTGAGACAAGTCCGGGGTTCGAGTC
CCGCCAGACGTCGTATTTCCGCTTTTTCTGCCGTGGGTAGAAAAAGGGAA
ATCAAGTGGAGAGAACCACGATAAAAGAACACTCGACCAGAGAGTCGAAA
GTGGAGTGAACCACTTGAGTAAAAGAACGCACGACTAGGGAGGGGGACAA
TATGAATGAAAAACTAGGCGCTGATTAGGGGCTTGATCAACCCCGGAGGA
TGTTATCGGCGGGAGGCCGTATCGAGCCCAAAGGTACTTATTTTGTTCGT
TTATAAAGGATAGACCACTGAGCTACTCAGTCAGCTAACCCCCCGGTGAA
TTTGACCGCTGTCGGCATGCGCGTGCATCTGCCACTTGACAGGGGGACGA
CTCGGCACCTCAATCTGTCAGAGTGGAGCTCTCGAGCGAAGCGGATCTGT
TTTACCACTACACACACCTCACAGACCAACCTTCCTTCCAGGTCAGGAGT
CGCACTATTAATACTTAACGTCACTAACGATAACCGCAGGCGAGCGTAGA
TTCTTGTCGAGCGATACACTGCTGTTGTGCCGATCTTCACGACAACTTAT
AAAAAATACTGTTACTTACTGCTGCCTTACATACCGGAGATGCATACTGT
AGATTAACGAGTCCACCACTACTACATACAGCAGCAGGTAGGCACTGGCG
TTGCTGGTAGGTTCGTACGAGACTGGGTGGCACGGTAGATGGATAGTCAG
CAACTTGCACAACGCGCGGTATGGAAGCCGATAAGCGGTGTTAGCTGTAG
AGCGTTTCTGTGCGTGATTAGCAATGGACAAAGCTTGTTGTTGGAGTTCC
GCTTCAGAGCCTGGCAAGTCAAATTGCTACTACAGCAATCTGGTATTCGT
CTGTAATAATCATGATCTGGAGGGCTGTTCGGAGCGTATACTGCAGTAGT
ATAGGTAGCAGCGGCAAGTACCATAAACCGCGAAGTATGCACAGACTACC
CTATATAGTCGGATCCCCCCCTCATGACGACGGTCATGCATGACATGATT
ACACACCCAACCCCTTGTGCTGTCTGCAGGGCAACTCTAGTTATAGTCGA
GATTCGAACTTGGAGATTAGAGAATATATATTAATAGTAGAGGTTAGAGA
TTCGAGAAACTGCTGCGTACCAGGGTACCTGGTGTATGCTGTAGTGTCAG
CAGGCTTCTCAGCATCGGATTTGGGGGCATGCATGTGGTATTCTCCTCGT
GTACCGCTCGCAAATATATTCGACGAACCCCCCCTCCCCTTCTCTTTCAG
TTGCCAAACCAAACCGCTGCTTACGCTTCAACCTCATCTTCGTGTGTTGC
TCTCTTCTGTTACGCTCTTCCTGGGCACTGAAGGTTATGCAAGATGACCA
AAAGCTCATGGTGGAGTTTCAGGATTACCCGAATGTTCTCATTCGAATGT
TAAACAACTGCATCAAGGAGCCCCACAGTCACCTAGCCGTTTTCGTGATG
CAGCATGACGTCAACGCTCGCCTAGACTTTATACAGGTTCGTTCGTTGTC
GGAGTGGCTCATTATCACAGCAAGAGTTGAACTGCTCGAGTATTCCATGG
TACCGCGTATCACCTGTTTTAAGTTGGTCAGTCTGGGACTTTAGAGGCCG
AAGGCGATGGGAATATATGACGATCATGATAATTGCCTAAACGAAGCAAA
GTAGCACGAACGCAGCCTCGGCTGTAAGATGAGGATGATGTGATGTATGA
ACACTATTTGTAGTGATAGAGCAGTGCTAGAGTTCTATAGTGTTAAAAGT
ATATGTTATGTACTTTTAACACTATAGTTGTAGATATATGTACTGGTAGT
AGGTACGAAACAAAGGTGTACTACACCCGCGCGGCATGATACGACTTGCG
CTCGCACTGCTATTAGACGCGCTCACAATGCTGTGGACACCAAGGCATCA
TCATTTATTATTATTTGTCGTTCGTTGCCGCCGTACCTGGGTTTAATTCG
TTCTTTACACCTTTTTCCCGGCAAGATTTCCATCCGCGGTCGGCGTCATC
AATTACCGCTGTAGTAGTGCTATTATTAGTATTATTAGCTAACAGGTTCA
ATACTACGTACCTCTGTGAATCTCTGCGTTTATCGAGATGACAACATGTA
TGCCCGTGTTTTAGAGAGGGTTGCGCGGTCAGACGAAGCCTGCAACGGAA
AAGCCTGAGCCCAAACGCTGCCGCCGTACTACTGTACTAAGGACTCTTAA
GGACACGAAAACTACCACGAGAAGGGCTCTTACAAAGTGTCTACCGGCGA
CTCTTCCATCGCCGAATTTGCAACGCGCAGCCTCAACATCACCCCCGACA
TCCATCCTGTTTATGTCCCAAATTGTTACCCTGACTCTCCTCCACTTCAT
TATGTTGGATGCATTCGTTCTTCGATCCATCATTCGTTCGACCGGACTGC
AGAATATGGAGTACAAGTTCGTGGAGTTAATGTCGTTGGAGTACACAAGA
TCGCCAGAAGACACGGTTCAGCATCAAATCACATACCGTTACAACGCCAT
GAAGGTAATGCCCTTCGAAGCGTACGGTCGAGTAATGTATGCCAGCCCGT
GTGCCAGCCCGTGTGCCAAACTGTATGTTGTATGCTGTATGCCAAAGGAA
GCCGTGCCGCGCGTTGTCGCCTTCTTGCTACTCGGTGTGGTATGTGTAGG
CGAGCGTCTGAAAATCAAATCAACTTGTTGTTGCGGAAGTTTTTAGTGTA
GTCCTACATAGTATCAATAGTAGTAGTACTAGGCTTGCTAGGTTCGCTTC
GGTAGTGCTAGTACGATGATGATGCTTTCAGCATTAATTTATTTACTGTA
GTCGTATCTGCATGGACTGACGGGTCTGTGGCATGGCTAACGTTTTCGAC
GCAGCAGGCGTGCCCAGTCCACCCTTGCATGGGCTCGCGTGATGAGCTAA
AAGGGGTACTAGATACCAGGTACTAATTTATGGACCGAACTTCAACGTGT
ATATAGAGTATTCGCATACGTAGGGTATCGTATTAATAGTGGTCACGATG
AAAAAGTCGAATCAACAGGTATCGACAGCCAGTTGCGCAGTTATTAATAT
TATTGGTTATTCTTGCTGGGGTTGTCCACCTACCATGGTACACCCCACAC
CTTCAATATTCACAGTGTATTTAAATGTCCACAAACAACGAACCGTTACT
TGTGCCCTCGAAGAATCGACGTTTACGACCCCTCCCTCCCTCCCTCCCCT
CCCCTCCTCCCTCCCTCCCTCTCGGGCGCGTCCGTCGCTCTGTATCGCGT
GCGACTCGCATTGTCGTCGCTGTCGCTTTTGCTGCCGATGTGGCTTCTCC
CATTGTGGTTGCCCCTTGTTCATGGCTTGCGTGCACTTATTGTAGTCTCG
ACTGGCTTTGATGCAGGCCCGGCTGCAGGAGGTGAACAACCTCGTCAAGC
TAAAAAACCCGTCCCTGTTGCTACAGTTACAGTCGCGGTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig1106:22406..28096-

>mRNA_M-pyrifera_M_contig1106.2221.1 ID=mRNA_M-pyrifera_M_contig1106.2221.1|Name=mRNA_M-pyrifera_M_contig1106.2221.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1248bp|location=Sequence derived from alignment at M-pyrifera_M_contig1106:22406..28096- (Macrocystis pyrifera P11B4 male)
ATGGTCCAAACCTTCGACTTCGGGTCCATTGAGGAGATGGATCCATCAGT
CGATGGTCCAAACCTTCGACTTCGGGTCCATTGAGGAGATGGATCCATCA
GTCGCGGACGGATTTCGCGTCATCTATGACCGTGAAGTCCCCTTTGAGCT
GAGAGTGCAGGAGTCAGCTGATGGCCCGCAGCAGGTCGGCACTCTCGAGG
CGATTAAGGTCAAGGTACTTCTGCTGCGGACGGATTTCGCGTCATCTATG
ACCGTGAAGTCCCCTTTGAGCTGAGAGTGCAGGAGTCAGCTGATGGCCCG
CAGCAGGTCGGCACTCTCGAGGCGATTAAGGTCAAGGTACTTCTGCTGGG
GGACGACTCGGCACCTCAATCTGTCAGAGTGGAGCTCTCGAGCGAAGCGG
ATCTGTTTTACCACTACACACACCTCACAGACCAACCTTCCTTCCAGGGG
GACGACTCGGCACCTCAATCTGTCAGAGTGGAGCTCTCGAGCGAAGCGGA
TCTGTTTTACCACTACACACACCTCACAGACCAACCTTCCTTCCAGGTTA
TGCAAGATGACCAAAAGCTCATGGTGGAGTTTCAGGATTACCCGAATGTT
CTCATTCGAATGTTAAACAACTGCATCAAGGAGCCCCACAGTCACCTAGC
CGTTTTCGTGATGCAGCATGACGTCAACGCTCGCCTAGACTTTATACAGG
TTATGCAAGATGACCAAAAGCTCATGGTGGAGTTTCAGGATTACCCGAAT
GTTCTCATTCGAATGTTAAACAACTGCATCAAGGAGCCCCACAGTCACCT
AGCCGTTTTCGTGATGCAGCATGACGTCAACGCTCGCCTAGACTTTATAC
AGAATATGGAGTACAAGTTCGTGGAGTTAATGTCGTTGGAGTACACAAGA
TCGCCAGAAGACACGGTTCAGCATCAAATCACATACCGTTACAACGCCAT
GAAGAATATGGAGTACAAGTTCGTGGAGTTAATGTCGTTGGAGTACACAA
GATCGCCAGAAGACACGGTTCAGCATCAAATCACATACCGTTACAACGCC
ATGAAGTCTCGACTGGCTTTGATGCAGGCCCGGCTGCAGGAGGTGAACAA
CCTCGTCAAGCTAAAAAACCCGTCCCTGTTGCTACAGTTACAGTCGCGGT
GATCTCGACTGGCTTTGATGCAGGCCCGGCTGCAGGAGGTGAACAACCTC
GTCAAGCTAAAAAACCCGTCCCTGTTGCTACAGTTACAGTCGCGGTGA
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