mRNA_M-pyrifera_M_contig110596.2218.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig110596.2218.1 vs. uniprot
Match: A0A2P6GEF4_9RHOB (Peptide ABC transporter n=3 Tax=Bacteria TaxID=2 RepID=A0A2P6GEF4_9RHOB) HSP 1 Score: 319 bits (818), Expect = 1.190e-104 Identity = 152/198 (76.77%), Postives = 169/198 (85.35%), Query Frame = 1
Query: 1 NHQVAPTDDVNIRRAIASATDYNTIRSALLPGEPLAGPMPSVFAEAYNNDLVEPTFDMEAARAHVAKSKYAGGDPIPVEIMFVAGLAFEEEIALLMKSNLDQIGFNTILKPEPWNRMTELAGKPETTPAINEVFYGATYPSPDSFFYTQYHSNAKGTWASMEWVLDPELDKMIDAARGTADIAKQNQIYKDIQARLAD 594
NHQVAPTDDVNIR+A+A ATDYNTI SA+LPGEPLAGPMP+VFA+AY + L P FD+ A+ HV+KSKYAG PI +EIMFVAGLAFEEEIALLMK+NLDQIGFNTILKPEPWNRMTELA PETTPAINEVFYGATYPSPD+FF+ QYHS AKGTWASMEWVLD ++D ID AR T D+ QN IYK IQ +L D
Sbjct: 279 NHQVAPTDDVNIRKAVALATDYNTILSAILPGEPLAGPMPNVFADAYLDSLTNPVFDLSKAKDHVSKSKYAGSQPIDIEIMFVAGLAFEEEIALLMKANLDQIGFNTILKPEPWNRMTELASNPETTPAINEVFYGATYPSPDTFFFAQYHSKAKGTWASMEWVLDDQIDAWIDEARSTGDVDVQNAIYKKIQKKLVD 476
BLAST of mRNA_M-pyrifera_M_contig110596.2218.1 vs. uniprot
Match: A0A6N9BCR3_9RHOB (ABC transporter substrate-binding protein n=4 Tax=Rhodobacteraceae bacterium TaxID=1904441 RepID=A0A6N9BCR3_9RHOB) HSP 1 Score: 316 bits (809), Expect = 2.850e-103 Identity = 154/198 (77.78%), Postives = 170/198 (85.86%), Query Frame = 1
Query: 1 NHQVAPTDDVNIRRAIASATDYNTIRSALLPGEPLAGPMPSVFAEAYNNDLVEPTFDMEAARAHVAKSKYAGGDPIPVEIMFVAGLAFEEEIALLMKSNLDQIGFNTILKPEPWNRMTELAGKPETTPAINEVFYGATYPSPDSFFYTQYHSNAKGTWASMEWVLDPELDKMIDAARGTADIAKQNQIYKDIQARLAD 594
NHQV+PTDDV+IR+AIA ATDY TIRSALLPGEPLAGPMP VFA AY +DL P FD+E AR HV KS YAG PI +EIMFVAGLAFEEEIALLMK+NLD IGFNTILKPEPWNRMTELA + ETTPAINEVFYGATYPSPDSFF+TQYHS A+GTWASMEWVL E+D +ID ARGTAD+ +QN+IYK +Q L D
Sbjct: 281 NHQVSPTDDVDIRKAIAYATDYETIRSALLPGEPLAGPMPPVFAGAYADDLELPKFDLEKAREHVEKSSYAGSGPIDIEIMFVAGLAFEEEIALLMKANLDPIGFNTILKPEPWNRMTELAARAETTPAINEVFYGATYPSPDSFFFTQYHSAAQGTWASMEWVLSDEVDALIDEARGTADVDRQNEIYKQLQHILVD 478
BLAST of mRNA_M-pyrifera_M_contig110596.2218.1 vs. uniprot
Match: A0A7C3ZSQ5_9RHOB (ABC transporter substrate-binding protein n=1 Tax=Aliiroseovarius sp. TaxID=1872442 RepID=A0A7C3ZSQ5_9RHOB) HSP 1 Score: 316 bits (809), Expect = 2.850e-103 Identity = 154/198 (77.78%), Postives = 170/198 (85.86%), Query Frame = 1
Query: 1 NHQVAPTDDVNIRRAIASATDYNTIRSALLPGEPLAGPMPSVFAEAYNNDLVEPTFDMEAARAHVAKSKYAGGDPIPVEIMFVAGLAFEEEIALLMKSNLDQIGFNTILKPEPWNRMTELAGKPETTPAINEVFYGATYPSPDSFFYTQYHSNAKGTWASMEWVLDPELDKMIDAARGTADIAKQNQIYKDIQARLAD 594
NHQV PTDD+NIR+AIA ATDY+TIRSALLPG PLAGPMP+VF +AY +DLV P+FD+ A+A V SKY GG IPVEIMFVAGLAFEEEIALLMKSNLDQIGF+TILKPEPWNRMTELA ETTPAINEVF+GATYPSPDSFF+TQYHS A+GTWASMEWVLD E+D ID ARGT D+A QN IYK IQ +L D
Sbjct: 281 NHQVPPTDDLNIRKAIAMATDYDTIRSALLPGAPLAGPMPNVFKDAYLDDLVAPSFDLAGAKALVDASKYGGGAAIPVEIMFVAGLAFEEEIALLMKSNLDQIGFDTILKPEPWNRMTELASSAETTPAINEVFFGATYPSPDSFFFTQYHSRAQGTWASMEWVLDDEIDAWIDEARGTGDVAAQNAIYKQIQRKLVD 478
BLAST of mRNA_M-pyrifera_M_contig110596.2218.1 vs. uniprot
Match: A0A4R6VZG3_9HYPH (Peptide/nickel transport system substrate-binding protein n=2 Tax=Maritalea TaxID=623276 RepID=A0A4R6VZG3_9HYPH) HSP 1 Score: 308 bits (790), Expect = 2.200e-100 Identity = 148/198 (74.75%), Postives = 167/198 (84.34%), Query Frame = 1
Query: 1 NHQVAPTDDVNIRRAIASATDYNTIRSALLPGEPLAGPMPSVFAEAYNNDLVEPTFDMEAARAHVAKSKYAGGDPIPVEIMFVAGLAFEEEIALLMKSNLDQIGFNTILKPEPWNRMTELAGKPETTPAINEVFYGATYPSPDSFFYTQYHSNAKGTWASMEWVLDPELDKMIDAARGTADIAKQNQIYKDIQARLAD 594
NHQVAPTDDV+IR+AIA ATDY TIRS LLPGEPLAGPMP VFA AY +DL P +++E A+ HVA SKYA IP+EIMFVAGLAFEEEIALLMKSNLDQ+GFNTI+KPEPWNRMTELA ETTPAINEVFYGATYPSPDSFFY QYHS A+GTW SMEWVLD ++D++I+ ARG DI QN+IYK++Q L D
Sbjct: 283 NHQVAPTDDVHIRKAIAYATDYETIRSQLLPGEPLAGPMPKVFAAAYLDDLAMPEYNLEKAKEHVAMSKYANAGAIPIEIMFVAGLAFEEEIALLMKSNLDQVGFNTIMKPEPWNRMTELASSAETTPAINEVFYGATYPSPDSFFYPQYHSRAQGTWTSMEWVLDDKVDELIEQARGEGDIDAQNEIYKELQRYLVD 480
BLAST of mRNA_M-pyrifera_M_contig110596.2218.1 vs. uniprot
Match: UPI000FD8F078 (ABC transporter substrate-binding protein n=1 Tax=Rhodobacterales TaxID=204455 RepID=UPI000FD8F078) HSP 1 Score: 307 bits (787), Expect = 6.580e-100 Identity = 146/198 (73.74%), Postives = 171/198 (86.36%), Query Frame = 1
Query: 1 NHQVAPTDDVNIRRAIASATDYNTIRSALLPGEPLAGPMPSVFAEAYNNDLVEPTFDMEAARAHVAKSKYAGGDPIPVEIMFVAGLAFEEEIALLMKSNLDQIGFNTILKPEPWNRMTELAGKPETTPAINEVFYGATYPSPDSFFYTQYHSNAKGTWASMEWVLDPELDKMIDAARGTADIAKQNQIYKDIQARLAD 594
NHQVAPTDDVNIRRA+A ATDY+ IR LLPGEPLAGPMP VFA+A+ ++L PT+D++ AR V S YAG +PI +EIM+VAGLAFEEEI LLMK+NLDQIGFNTILKPEPWNRMTELA E+TPA+N+VFYGATYPSPDSFF+ QYHS+A GTWASMEWVL E+D +IDAARGTADI +QN++YK++QA LAD
Sbjct: 284 NHQVAPTDDVNIRRAVAYATDYDLIREVLLPGEPLAGPMPPVFADAFLDELEMPTYDLDMARQMVEASSYAGSEPIDIEIMYVAGLAFEEEIGLLMKANLDQIGFNTILKPEPWNRMTELAATAESTPAVNQVFYGATYPSPDSFFFPQYHSSAAGTWASMEWVLSDEVDALIDAARGTADIDEQNRLYKELQALLAD 481
BLAST of mRNA_M-pyrifera_M_contig110596.2218.1 vs. uniprot
Match: A0A8I1IHA1_9RHOB (ABC transporter substrate-binding protein n=1 Tax=Rhodobacteraceae bacterium TaxID=1904441 RepID=A0A8I1IHA1_9RHOB) HSP 1 Score: 288 bits (738), Expect = 1.380e-92 Identity = 139/198 (70.20%), Postives = 162/198 (81.82%), Query Frame = 1
Query: 1 NHQVAPTDDVNIRRAIASATDYNTIRSALLPGEPLAGPMPSVFAEAYNNDLVEPTFDMEAARAHVAKSKYAGGDPIPVEIMFVAGLAFEEEIALLMKSNLDQIGFNTILKPEPWNRMTELAGKPETTPAINEVFYGATYPSPDSFFYTQYHSNAKGTWASMEWVLDPELDKMIDAARGTADIAKQNQIYKDIQARLAD 594
N+Q PTDDV IRRA+A ATDY+TIR LLPGEPLAGPMP VFA+AY + L P FD++AA V +S Y G PI +E+M+VAGLAFEEEIALLMKS LD IGFNTIL+PEPWNRMTELA PE TPA+ +VFYGATYPSPDS+F+ QYHS A GTWASMEWV++PE+D MIDAAR T DI QN+IY+D+QARL +
Sbjct: 281 NNQRPPTDDVLIRRAMALATDYDTIREVLLPGEPLAGPMPPVFADAYLDTLEAPVFDLQAAAELVQQSSYGGQGPIDIEMMYVAGLAFEEEIALLMKSTLDTIGFNTILRPEPWNRMTELASDPEQTPAMTQVFYGATYPSPDSYFFPQYHSRAAGTWASMEWVMNPEIDAMIDAARATVDIDAQNRIYRDLQARLVE 478
BLAST of mRNA_M-pyrifera_M_contig110596.2218.1 vs. uniprot
Match: A0A357LP14_9RHOB (Peptide ABC transporter n=3 Tax=Bacteria TaxID=2 RepID=A0A357LP14_9RHOB) HSP 1 Score: 287 bits (734), Expect = 5.830e-92 Identity = 136/198 (68.69%), Postives = 160/198 (80.81%), Query Frame = 1
Query: 1 NHQVAPTDDVNIRRAIASATDYNTIRSALLPGEPLAGPMPSVFAEAYNNDLVEPTFDMEAARAHVAKSKYAGGDPIPVEIMFVAGLAFEEEIALLMKSNLDQIGFNTILKPEPWNRMTELAGKPETTPAINEVFYGATYPSPDSFFYTQYHSNAKGTWASMEWVLDPELDKMIDAARGTADIAKQNQIYKDIQARLAD 594
N+ VAPTDDVNIR+AIA ATDY+TIR +LPG PL GPMP +FA+AY +D+ P FD+ A+ +V S YAG PI +EIM+VAGLAFEEEI LLMKS LD IGFNTILKPEPWNRMTELA TTPAIN+VFYGATYPSPD+FF+TQYHS A GTWASMEWVL E+D MID AR +D+A+QN+IYK +Q +L +
Sbjct: 283 NNSVAPTDDVNIRKAIAYATDYDTIREVILPGAPLTGPMPPIFADAYPDDVAAPRFDLAKAKEYVDASSYAGSGPIDIEIMYVAGLAFEEEIGLLMKSLLDTIGFNTILKPEPWNRMTELAADVNTTPAINQVFYGATYPSPDTFFFTQYHSRAAGTWASMEWVLSDEVDAMIDEARTISDVARQNEIYKSLQRKLVE 480
BLAST of mRNA_M-pyrifera_M_contig110596.2218.1 vs. uniprot
Match: A0A640VU73_9RHOB (Peptide ABC transporter n=1 Tax=Roseobacter cerasinus TaxID=2602289 RepID=A0A640VU73_9RHOB) HSP 1 Score: 284 bits (727), Expect = 6.390e-91 Identity = 138/198 (69.70%), Postives = 157/198 (79.29%), Query Frame = 1
Query: 1 NHQVAPTDDVNIRRAIASATDYNTIRSALLPGEPLAGPMPSVFAEAYNNDLVEPTFDMEAARAHVAKSKYAGGDPIPVEIMFVAGLAFEEEIALLMKSNLDQIGFNTILKPEPWNRMTELAGKPETTPAINEVFYGATYPSPDSFFYTQYHSNAKGTWASMEWVLDPELDKMIDAARGTADIAKQNQIYKDIQARLAD 594
N+Q PTDDVNIR+AIA ATDY TIR +LPGEPLAGPMP VFA+A+ DL P FD+E A+ V SKYAG PI +EIM+VAGLAFEEEI LLMKS LD IGFNTILKPEPWNRMTELA E TPAIN+VFYGATYPSPD++F+ QYHS A GTWASMEWVL E+D MID AR T D+ QN IY+D+Q +L +
Sbjct: 282 NNQRPPTDDVNIRKAIAYATDYETIRDVILPGEPLAGPMPPVFADAFPEDLELPVFDLEKAKEFVEASKYAGQGPIDIEIMYVAGLAFEEEIGLLMKSILDTIGFNTILKPEPWNRMTELAADVEATPAINQVFYGATYPSPDTYFFPQYHSRAAGTWASMEWVLSDEIDAMIDEARATPDVDAQNTIYQDLQRKLVE 479
BLAST of mRNA_M-pyrifera_M_contig110596.2218.1 vs. uniprot
Match: A0A3N2RAG4_9RHOB (ABC transporter substrate-binding protein n=1 Tax=Histidinibacterium lentulum TaxID=2480588 RepID=A0A3N2RAG4_9RHOB) HSP 1 Score: 281 bits (719), Expect = 9.890e-90 Identity = 136/198 (68.69%), Postives = 159/198 (80.30%), Query Frame = 1
Query: 1 NHQVAPTDDVNIRRAIASATDYNTIRSALLPGEPLAGPMPSVFAEAYNNDLVEPTFDMEAARAHVAKSKYAGGDPIPVEIMFVAGLAFEEEIALLMKSNLDQIGFNTILKPEPWNRMTELAGKPETTPAINEVFYGATYPSPDSFFYTQYHSNAKGTWASMEWVLDPELDKMIDAARGTADIAKQNQIYKDIQARLAD 594
N+Q PTDDV IRRA+A ATDY TIR LLPGEPLAGPMP VFA+A+ D+ P FD+EAA V +S YA PI +E+M+VAGLAFEEEIALL KS LD IGFN +L+PEPWNRMTELA E TPA+N+VFYGATYPSPDS+F+ QYHS A GTWASMEWVLDPE+D MIDAAR TAD+ +QN+IYK +Q +L +
Sbjct: 281 NNQRPPTDDVLIRRALALATDYETIREVLLPGEPLAGPMPPVFADAFPEDVALPVFDLEAAAELVRQSSYADQVPIDIEMMYVAGLAFEEEIALLQKSILDSIGFNVLLRPEPWNRMTELASDVEQTPAMNQVFYGATYPSPDSYFFPQYHSRAAGTWASMEWVLDPEVDAMIDAARATADVEEQNEIYKALQRKLVE 478
BLAST of mRNA_M-pyrifera_M_contig110596.2218.1 vs. uniprot
Match: A0A238LJR2_9RHOB (Putative D,D-dipeptide-binding periplasmic protein DdpA n=1 Tax=Flavimaricola marinus TaxID=1819565 RepID=A0A238LJR2_9RHOB) HSP 1 Score: 280 bits (717), Expect = 2.030e-89 Identity = 134/198 (67.68%), Postives = 161/198 (81.31%), Query Frame = 1
Query: 1 NHQVAPTDDVNIRRAIASATDYNTIRSALLPGEPLAGPMPSVFAEAYNNDLVEPTFDMEAARAHVAKSKYAGGDPIPVEIMFVAGLAFEEEIALLMKSNLDQIGFNTILKPEPWNRMTELAGKPETTPAINEVFYGATYPSPDSFFYTQYHSNAKGTWASMEWVLDPELDKMIDAARGTADIAKQNQIYKDIQARLAD 594
N+Q PTDD NIRRA+A ATDY TIR LLPGEPLAGPMP VFA+A+ +D++ P FD+EAARA V +S YAG PI VE+M+VAGLAFEEEIALL KS LD IGFNTIL+PEPWNRMTELA +TTP + +VFYGATYPSPDS+F+ Q HS+A GTW SM+WV++ E+D MID AR TAD+ +QN+IY+D+Q L D
Sbjct: 282 NNQRPPTDDANIRRALALATDYETIREFLLPGEPLAGPMPPVFADAFPDDVLPPEFDLEAARALVEQSAYAGQGPIDVEMMYVAGLAFEEEIALLQKSILDSIGFNTILRPEPWNRMTELAANVDTTPGMTQVFYGATYPSPDSYFFNQSHSDAAGTWQSMDWVMNDEVDAMIDEARSTADVDRQNEIYRDLQRMLVD 479 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig110596.2218.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig110596.2218.1 >prot_M-pyrifera_M_contig110596.2218.1 ID=prot_M-pyrifera_M_contig110596.2218.1|Name=mRNA_M-pyrifera_M_contig110596.2218.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=198bp NHQVAPTDDVNIRRAIASATDYNTIRSALLPGEPLAGPMPSVFAEAYNNDback to top mRNA from alignment at M-pyrifera_M_contig110596:3..596- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig110596.2218.1 ID=mRNA_M-pyrifera_M_contig110596.2218.1|Name=mRNA_M-pyrifera_M_contig110596.2218.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=594bp|location=Sequence derived from alignment at M-pyrifera_M_contig110596:3..596- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig110596:3..596- >mRNA_M-pyrifera_M_contig110596.2218.1 ID=mRNA_M-pyrifera_M_contig110596.2218.1|Name=mRNA_M-pyrifera_M_contig110596.2218.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1188bp|location=Sequence derived from alignment at M-pyrifera_M_contig110596:3..596- (Macrocystis pyrifera P11B4 male)back to top |