mRNA_M-pyrifera_M_contig11045.2185.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig11045.2185.1 vs. uniprot
Match: D7FZV3_ECTSI (Flagellar associated protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZV3_ECTSI) HSP 1 Score: 271 bits (693), Expect = 2.170e-81 Identity = 171/330 (51.82%), Postives = 212/330 (64.24%), Query Frame = 1
Query: 4 TQISVVLTARDDLNQKKKRLESEISQQSQEQNDIYQYLRKKLKDNYVAIAVLETKVSRAHDERLTREKELIATAVDLGEKRESEKVRLVERLEVLDGELAGIEEFQENSAAYAQKLRDLEAKISGCKEAFHDELMALSSQVDEEWEKGRRKKDDRMKTAKKVAAKATQEKLSPKTKHRIEQNKKMMTELRFQCFEVEKMQHVRQGLLKANTMLLAQAASARHRVEELARRSQLLQRITRYMYHKARRHGF----GRFQSQSTP--LSACASGGEGVPQRGIGVAAGXXXXXXXXXXXXXXXGDSASGVLYKLAGMSVEERQQMLDLREEV 975
+QI VVLT RD+L ++ LE++ QQSQ+Q+DIYQYLR KLKDNYVAIA LE ++RL E+L LD EL I+E+QENS Y Q L+D+EAKI+GCK+AF++E+ L+SQ++EEWE GRR K++R K KK AAKATQE+L P+TKHRI QNKKMM+ELRFQCFEVEKM RQGL+++NT+LLA++ASARHRVEELARRS LLQRI RYM+ K ++ G G S P + C G G AG SG +Y+LAGMS EERQQMLDLREE+
Sbjct: 45 SQIEVVLTTRDNLVIQRAELETKAKQQSQDQSDIYQYLRNKLKDNYVAIAELEA------------------------------QIRLGEKLGTLDVELTAIKEYQENSQIYEQTLKDMEAKIAGCKDAFNEEMALLNSQLEEEWETGRRDKEERRKITKKAAAKATQEQLGPRTKHRIAQNKKMMSELRFQCFEVEKMYRARQGLMESNTLLLAKSASARHRVEELARRSHLLQRIIRYMHQKLQKRGACLDDGSIGPNSAPEDVDDCERPGASPEIGGHAARAGRRSGSRGRH----------SGTVYRLAGMSEEERQQMLDLREEL 334
BLAST of mRNA_M-pyrifera_M_contig11045.2185.1 vs. uniprot
Match: A0A6H5L4N5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4N5_9PHAE) HSP 1 Score: 119 bits (298), Expect = 2.640e-26 Identity = 76/147 (51.70%), Postives = 92/147 (62.59%), Query Frame = 1
Query: 556 MMTELRFQCFEVEKMQHVRQGLLKANTMLLAQAASARHRVEELARRSQLLQRITRYMYHKARRHG-------FGRFQSQSTPLSACASGGEGVPQRGIGVAAGXXXXXXXXXXXXXXXGDSASGVLYKLAGMSVEERQQMLDLREEV 975
MM+ELRFQCFEVEKM RQGL+++NT+LLA++ASARHRVEELARRS LLQRI RYM+ K ++ G GR S+ + C G P+ G+ A G G +Y+LAGMS EERQQMLDLREEV
Sbjct: 1 MMSELRFQCFEVEKMYRARQGLMESNTLLLAKSASARHRVEELARRSHLLQRIIRYMHQKLQKRGACLDDGSIGR-NSEHKDVDGCERPGAS-PETGVHAAGGGRRGGSRGRHR---------GTVYRLAGMSEEERQQMLDLREEV 136
BLAST of mRNA_M-pyrifera_M_contig11045.2185.1 vs. uniprot
Match: A0A836CFU2_9STRA (Cilia- and flagella-associated protein 157 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFU2_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 1.660e-11 Identity = 64/242 (26.45%), Postives = 115/242 (47.52%), Query Frame = 1
Query: 4 TQISVVLTARDDLNQKKKRLESEISQQSQEQNDIYQYLRKKLKDNYVAIAVLETKVSRAHDERLTREKELIATAVDLGEKRESEKVRLVERLEVLDGELAGIEEFQENSAAYAQKLRDLEAKISGCKEAFHDELMALSSQVDEEWEKGRRKKDDRMKTAKKVAAKATQEKLSPKTKHRIEQNKKMMTELRFQCFEVEKMQHVRQGLLKANTMLLAQAASARHRVEELARRSQLLQRITRYMY 729
+Q+ V R + + L+ ++ + +Q ++DI L++K+ NY IAVLE K+ H R E+ L + R SE+ R R L+ L ++ F N + ++ L+ ++ C E L +++E E R+ +R+ A++ + ++L + R+++NK++ TEL FQC EV+++ V L+ N L++ E LAR S LQ R M+
Sbjct: 42 SQLETVCARRTQYLARLEELQVKVEEAAQGRSDIVAKLQEKVARNYDDIAVLEAKIEEEHVARQAEERRLQDVIAVIEAARTSERTRCEARRLELEATLTDLKGFLANKSTLESEIETLQRQLDECDSRHAAEKRELQERLEEAAEARRQDTLERISAARQAVVQQLGQQLGAQAMARVQENKRLATELHFQCMEVDRLSSVCSTLVHDNQSALSEMQLLAAEAETLARASTQLQASIRDMH 283 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11045.2185.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig11045.2185.1 >prot_M-pyrifera_M_contig11045.2185.1 ID=prot_M-pyrifera_M_contig11045.2185.1|Name=mRNA_M-pyrifera_M_contig11045.2185.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=325bp MTQISVVLTARDDLNQKKKRLESEISQQSQEQNDIYQYLRKKLKDNYVAIback to top mRNA from alignment at M-pyrifera_M_contig11045:372..10000+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig11045.2185.1 ID=mRNA_M-pyrifera_M_contig11045.2185.1|Name=mRNA_M-pyrifera_M_contig11045.2185.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=9629bp|location=Sequence derived from alignment at M-pyrifera_M_contig11045:372..10000+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig11045:372..10000+ >mRNA_M-pyrifera_M_contig11045.2185.1 ID=mRNA_M-pyrifera_M_contig11045.2185.1|Name=mRNA_M-pyrifera_M_contig11045.2185.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1950bp|location=Sequence derived from alignment at M-pyrifera_M_contig11045:372..10000+ (Macrocystis pyrifera P11B4 male)back to top |