mRNA_M-pyrifera_M_contig110409.2181.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig110409.2181.1
Unique NamemRNA_M-pyrifera_M_contig110409.2181.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig110409.2181.1 vs. uniprot
Match: A0A3B8PN20_9PLAN (Alkaline phosphatase n=3 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3B8PN20_9PLAN)

HSP 1 Score: 248 bits (633), Expect = 1.210e-79
Identity = 114/155 (73.55%), Postives = 138/155 (89.03%), Query Frame = 1
Query:    1 TLKGPIIVVCHQPLAGAWAVDNAAEIQSILGDASDKIVLAINGHSHIDDVLRVKNVTYLHVNSASYQWVGGDYQHESYSREVHDKHPWVSRTCPYREALFATITVEPRSLTIHVEGRVSEWVGKSPAELGVDLDPQLTNGEEIAARIRNRRVVRI 465
            +L+GP+IVV HQPLAGAWAVDN+ EIQ ILG+ASDK++LAINGHSHIDDVLR K VTY+HVNSASYQWVGG++ H+SYS+++H KHP+++ TCPYR +LFAT+TV P+SLTIHVEGR SEWVG SPAELG D DP LT+GE+I ARIR+R+V RI
Sbjct:  188 SLEGPVIVVSHQPLAGAWAVDNSKEIQGILGEASDKVLLAINGHSHIDDVLRYKKVTYMHVNSASYQWVGGNHLHDSYSKDIHAKHPFIAYTCPYRHSLFATLTVNPKSLTIHVEGRKSEWVGPSPAELGADQDPTLTDGEQITARIRDRQVKRI 342          
BLAST of mRNA_M-pyrifera_M_contig110409.2181.1 vs. uniprot
Match: A0A2E8EWS9_9PLAN (Alkaline phosphatase n=1 Tax=Planctomyces sp. TaxID=37635 RepID=A0A2E8EWS9_9PLAN)

HSP 1 Score: 243 bits (620), Expect = 7.180e-77
Identity = 114/155 (73.55%), Postives = 137/155 (88.39%), Query Frame = 1
Query:    1 TLKGPIIVVCHQPLAGAWAVDNAAEIQSILGDASDKIVLAINGHSHIDDVLRVKNVTYLHVNSASYQWVGGDYQHESYSREVHDKHPWVSRTCPYREALFATITVEPRSLTIHVEGRVSEWVGKSPAELGVDLDPQLTNGEEIAARIRNRRVVRI 465
            +++GP+IVV HQPLAGAWAVDNA EIQ+ILG+ASDK++LAINGHSHIDDVLR K VTYLHVNSASYQWVGG ++H+SYS+ VH KHP++S TCPYR+ LFA +TV+P+SLTI VEGR S+WVG SPAELG D DP LT+GE+IA RIR+R+V RI
Sbjct:  252 SVEGPVIVVSHQPLAGAWAVDNAKEIQNILGEASDKVLLAINGHSHIDDVLRYKKVTYLHVNSASYQWVGGAHRHDSYSKAVHAKHPFISYTCPYRDPLFAMLTVDPKSLTIRVEGRKSKWVGPSPAELGADQDPTLTDGEQIAPRIRDRQVKRI 406          
BLAST of mRNA_M-pyrifera_M_contig110409.2181.1 vs. uniprot
Match: A0A2E1KU66_9PLAN (Metallophos domain-containing protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E1KU66_9PLAN)

HSP 1 Score: 243 bits (621), Expect = 3.160e-76
Identity = 115/154 (74.68%), Postives = 137/154 (88.96%), Query Frame = 1
Query:    4 LKGPIIVVCHQPLAGAWAVDNAAEIQSILGDASDKIVLAINGHSHIDDVLRVKNVTYLHVNSASYQWVGGDYQHESYSREVHDKHPWVSRTCPYREALFATITVEPRSLTIHVEGRVSEWVGKSPAELGVDLDPQLTNGEEIAARIRNRRVVRI 465
            + GP+IVV HQPLAGAWAVDNA EIQSILG+ASDK++LAINGHSHIDDVLR + VTY+HVNSASYQWVGG + HESYS++VH K+P++S TCPYR++LFAT+TV+P+SLTI VEGR SEWVG SPAELG D DP LT+GE+IA RIR+R+V RI
Sbjct:  321 VDGPVIVVSHQPLAGAWAVDNAKEIQSILGEASDKVLLAINGHSHIDDVLRRQKVTYMHVNSASYQWVGGAHLHESYSKDVHAKYPFISYTCPYRDSLFATLTVDPKSLTIRVEGRKSEWVGPSPAELGADQDPTLTDGEQIAPRIRDRQVKRI 474          
BLAST of mRNA_M-pyrifera_M_contig110409.2181.1 vs. uniprot
Match: A0A2E5DZF9_9BACT (Alkaline phosphatase n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A2E5DZF9_9BACT)

HSP 1 Score: 238 bits (606), Expect = 1.870e-75
Identity = 109/150 (72.67%), Postives = 130/150 (86.67%), Query Frame = 1
Query:    1 TLKGPIIVVCHQPLAGAWAVDNAAEIQSILGDASDKIVLAINGHSHIDDVLRVKNVTYLHVNSASYQWVGGDYQHESYSREVHDKHPWVSRTCPYREALFATITVEPRSLTIHVEGRVSEWVGKSPAELGVDLDPQLTNGEEIAARIRNR 450
            TL GPIIV CHQPLAGA+AVDNA EIQ ILGDA+DK++LAINGHSHID V+RVKNVTYLHVNSASY+WVGGD +HESYSRE+H+ HPW+S TCPYR+ LFA +T++P +  I VEG  + WVG+SPAELG+DL P+L NGE+IA RIR+R
Sbjct:  196 TLDGPIIVACHQPLAGAYAVDNAEEIQGILGDAADKVILAINGHSHIDQVVRVKNVTYLHVNSASYKWVGGDNRHESYSREIHEAHPWISCTCPYRDPLFAMLTIDPDASAIKVEGTNTTWVGQSPAELGLDLHPELINGEQIAPRIRDR 345          
BLAST of mRNA_M-pyrifera_M_contig110409.2181.1 vs. uniprot
Match: A0A3B8UYA1_9BACT (Metallophos domain-containing protein n=2 Tax=Phycisphaerae TaxID=666505 RepID=A0A3B8UYA1_9BACT)

HSP 1 Score: 234 bits (597), Expect = 2.030e-73
Identity = 106/155 (68.39%), Postives = 130/155 (83.87%), Query Frame = 1
Query:    1 TLKGPIIVVCHQPLAGAWAVDNAAEIQSILGDASDKIVLAINGHSHIDDVLRVKNVTYLHVNSASYQWVGGDYQHESYSREVHDKHPWVSRTCPYREALFATITVEPRSLTIHVEGRVSEWVGKSPAELGVDLDPQLTNGEEIAARIRNRRVVRI 465
            T + P++V CHQPLAGA+AVDNA EIQ ILGDA+D+++L INGHSH+D ++RV  VT+LHVNSASYQWVGGD++H SY+ +VH+KHPW++ TCPYR+ LFA IT++PR L I VEG  SEWVG SPAELGVDLD  LTNGEEIA RIR RR+ R+
Sbjct:  251 TGERPVVVACHQPLAGAFAVDNAEEIQGILGDAADRVILVINGHSHVDQLVRVAGVTHLHVNSASYQWVGGDHRHASYAADVHEKHPWIACTCPYRDCLFARITIDPRDLEIRVEGVGSEWVGASPAELGVDLDQALTNGEEIAPRIRGRRIARV 405          
BLAST of mRNA_M-pyrifera_M_contig110409.2181.1 vs. uniprot
Match: A0A2E3Q3D1_9BACT (Alkaline phosphatase n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A2E3Q3D1_9BACT)

HSP 1 Score: 229 bits (584), Expect = 2.770e-72
Identity = 101/154 (65.58%), Postives = 127/154 (82.47%), Query Frame = 1
Query:    4 LKGPIIVVCHQPLAGAWAVDNAAEIQSILGDASDKIVLAINGHSHIDDVLRVKNVTYLHVNSASYQWVGGDYQHESYSREVHDKHPWVSRTCPYREALFATITVEPRSLTIHVEGRVSEWVGKSPAELGVDLDPQLTNGEEIAARIRNRRVVRI 465
            ++GPIIV CHQPLAG WA+DNA EIQ IL  A+D+++L INGHSHID +LRV NV +LHVNSASYQWVGGD++HESYS+E+H  HPW+S TCPY +ALFAT+ ++P +  I VEG  + WVG SPAELG+D DP L NGE+IA RIR+RR++R+
Sbjct:  185 IRGPIIVACHQPLAGPWAIDNAEEIQGILESAADRVILVINGHSHIDHLLRVGNVNHLHVNSASYQWVGGDHRHESYSKEIHAAHPWISCTCPYEDALFATLIIDPETHRIEVEGTSTRWVGSSPAELGLDKDPNLINGEQIAPRIRDRRILRV 338          
BLAST of mRNA_M-pyrifera_M_contig110409.2181.1 vs. uniprot
Match: A0A2D5E3T8_9BACT (Metallophos domain-containing protein n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A2D5E3T8_9BACT)

HSP 1 Score: 230 bits (587), Expect = 7.060e-72
Identity = 104/154 (67.53%), Postives = 130/154 (84.42%), Query Frame = 1
Query:    4 LKGPIIVVCHQPLAGAWAVDNAAEIQSILGDASDKIVLAINGHSHIDDVLRVKNVTYLHVNSASYQWVGGDYQHESYSREVHDKHPWVSRTCPYREALFATITVEPRSLTIHVEGRVSEWVGKSPAELGVDLDPQLTNGEEIAARIRNRRVVRI 465
            + GPIIV CHQPLAG WA+DNA EIQ++L  A+DK++L INGHSHID VLRV+NVT+LHVNSASYQWVGGD++HESYS+E+H+ HPW+S TCPY +ALFAT+TV+P +  + VEG  S WVGKSPAELG   +P L +GE+IA RIR+RR+VR+
Sbjct:  255 IDGPIIVACHQPLAGPWAIDNAEEIQALLEAAADKVILVINGHSHIDHVLRVRNVTHLHVNSASYQWVGGDHRHESYSKEIHESHPWISCTCPYEDALFATLTVDPATHQVRVEGTSSCWVGKSPAELGSHKNPALIHGEQIAPRIRDRRLVRV 408          
BLAST of mRNA_M-pyrifera_M_contig110409.2181.1 vs. uniprot
Match: A0A3R7SJJ2_9BACT (Metallophos domain-containing protein n=1 Tax=Phycisphaera sp. TMED9 TaxID=1986611 RepID=A0A3R7SJJ2_9BACT)

HSP 1 Score: 226 bits (576), Expect = 4.360e-71
Identity = 100/154 (64.94%), Postives = 128/154 (83.12%), Query Frame = 1
Query:    4 LKGPIIVVCHQPLAGAWAVDNAAEIQSILGDASDKIVLAINGHSHIDDVLRVKNVTYLHVNSASYQWVGGDYQHESYSREVHDKHPWVSRTCPYREALFATITVEPRSLTIHVEGRVSEWVGKSPAELGVDLDPQLTNGEEIAARIRNRRVVRI 465
            + GPIIV  HQPLAG +AVDNA EIQ++LG A+DK++LAINGHSHID++ RV N+TYLHVNSASY+WVGGD++H SY  +VH+ HPW+S TCPYR+ LFATIT++P  L + VEG  S WVG++PAELGVD  P+L +GE+IA RIR+RR+ R+
Sbjct:  184 IDGPIIVASHQPLAGPYAVDNADEIQAVLGSAADKVILAINGHSHIDEIRRVGNITYLHVNSASYKWVGGDHRHRSYGEDVHEGHPWISYTCPYRDPLFATITIDPEDLAVRVEGTGSRWVGETPAELGVDRHPELIHGEQIAPRIRDRRISRV 337          
BLAST of mRNA_M-pyrifera_M_contig110409.2181.1 vs. uniprot
Match: A0A2E8K2U9_9PLAN (Metallophos domain-containing protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E8K2U9_9PLAN)

HSP 1 Score: 226 bits (576), Expect = 6.350e-71
Identity = 100/154 (64.94%), Postives = 130/154 (84.42%), Query Frame = 1
Query:    1 TLKGPIIVVCHQPLAGAWAVDNAAEIQSILGDASDKIVLAINGHSHIDDVLRVKNVTYLHVNSASYQWVGGDYQHESYSREVHDKHPWVSRTCPYREALFATITVEPRSLTIHVEGRVSEWVGKSPAELGVDLDPQLTNGEEIAARIRNRRVVR 462
            T+ GPIIV CHQPLAG WA+DNA EIQ +L  A+DK++L INGHSHID VLRV NVT+LHVNSASYQWVGGD+++ESYS+E+H+ +PW+S TCPY++ALFAT+ ++P++  I V G  S WVGKSPAELG+D +P L +GE+IA RIR+R+++R
Sbjct:  196 TVDGPIIVACHQPLAGPWAIDNAKEIQELLSTAADKVILVINGHSHIDHVLRVGNVTHLHVNSASYQWVGGDHRNESYSKEIHEANPWISYTCPYQDALFATLMIDPKTHRIEVMGTSSRWVGKSPAELGLDKNPDLIHGEQIAPRIRDRKIIR 349          
BLAST of mRNA_M-pyrifera_M_contig110409.2181.1 vs. uniprot
Match: A0A2D6YV98_9BACT (Metallophos domain-containing protein n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A2D6YV98_9BACT)

HSP 1 Score: 226 bits (575), Expect = 4.160e-70
Identity = 101/151 (66.89%), Postives = 126/151 (83.44%), Query Frame = 1
Query:   13 PIIVVCHQPLAGAWAVDNAAEIQSILGDASDKIVLAINGHSHIDDVLRVKNVTYLHVNSASYQWVGGDYQHESYSREVHDKHPWVSRTCPYREALFATITVEPRSLTIHVEGRVSEWVGKSPAELGVDLDPQLTNGEEIAARIRNRRVVRI 465
            PI+V CHQPLAG +AVDNA EI +ILG A+D+++L INGHSH D ++RV  VT+LHVNSASYQWVGGD++H SY+ ++H+KHPW++ TCPYR+ LFA IT++P  L I VEG  S WVG SPAELGVDLDP+LTNGEEIA RIR+RR+ R+
Sbjct:  255 PIVVACHQPLAGVFAVDNAEEIGAILGAAADRVILVINGHSHTDQMVRVAGVTHLHVNSASYQWVGGDHRHSSYAEDIHEKHPWIACTCPYRDGLFARITIDPGDLEIRVEGVGSSWVGASPAELGVDLDPRLTNGEEIAPRIRDRRITRV 405          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig110409.2181.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3B8PN20_9PLAN1.210e-7973.55Alkaline phosphatase n=3 Tax=Planctomycetaceae bac... [more]
A0A2E8EWS9_9PLAN7.180e-7773.55Alkaline phosphatase n=1 Tax=Planctomyces sp. TaxI... [more]
A0A2E1KU66_9PLAN3.160e-7674.68Metallophos domain-containing protein n=1 Tax=Plan... [more]
A0A2E5DZF9_9BACT1.870e-7572.67Alkaline phosphatase n=1 Tax=Phycisphaerae bacteri... [more]
A0A3B8UYA1_9BACT2.030e-7368.39Metallophos domain-containing protein n=2 Tax=Phyc... [more]
A0A2E3Q3D1_9BACT2.770e-7265.58Alkaline phosphatase n=1 Tax=Phycisphaerae bacteri... [more]
A0A2D5E3T8_9BACT7.060e-7267.53Metallophos domain-containing protein n=1 Tax=Phyc... [more]
A0A3R7SJJ2_9BACT4.360e-7164.94Metallophos domain-containing protein n=1 Tax=Phyc... [more]
A0A2E8K2U9_9PLAN6.350e-7164.94Metallophos domain-containing protein n=1 Tax=Plan... [more]
A0A2D6YV98_9BACT4.160e-7066.89Metallophos domain-containing protein n=1 Tax=Phyc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig110409contigM-pyrifera_M_contig110409:125..598 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score174.1
Seed ortholog evalue5.2e-41
Seed eggNOG ortholog1286632.P278_02410
KEGG rclassRC00296
KEGG koko:K03651
KEGG ReactionR00191
KEGG Pathwayko00230,ko02025,map00230,map02025
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Calcineurin-like phosphoesterase superfamily domain
EggNOG OGs1I2P8@117743,4NI6R@976,COG1409@1,COG1409@2
EC3.1.4.53
COG Functional cat.S
Best tax levelFlavobacteriia
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons1
Model size474
Cds size474
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815615.2924654-CDS-M-pyrifera_M_contig110409:124..5981622815615.2924654-CDS-M-pyrifera_M_contig110409:124..598Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig110409 125..598 -
1692277488.5363328-CDS-M-pyrifera_M_contig110409:124..5981692277488.5363328-CDS-M-pyrifera_M_contig110409:124..598Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig110409 125..598 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig110409.2181.1prot_M-pyrifera_M_contig110409.2181.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig110409 125..598 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig110409.2181.1

>prot_M-pyrifera_M_contig110409.2181.1 ID=prot_M-pyrifera_M_contig110409.2181.1|Name=mRNA_M-pyrifera_M_contig110409.2181.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=158bp
TLKGPIIVVCHQPLAGAWAVDNAAEIQSILGDASDKIVLAINGHSHIDDV
LRVKNVTYLHVNSASYQWVGGDYQHESYSREVHDKHPWVSRTCPYREALF
ATITVEPRSLTIHVEGRVSEWVGKSPAELGVDLDPQLTNGEEIAARIRNR
RVVRIVN*
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mRNA from alignment at M-pyrifera_M_contig110409:125..598-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig110409.2181.1 ID=mRNA_M-pyrifera_M_contig110409.2181.1|Name=mRNA_M-pyrifera_M_contig110409.2181.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=474bp|location=Sequence derived from alignment at M-pyrifera_M_contig110409:125..598- (Macrocystis pyrifera P11B4 male)
ACTCTGAAAGGCCCGATCATCGTTGTTTGTCACCAACCACTGGCGGGAGC CTGGGCCGTTGATAACGCCGCAGAAATCCAATCCATCCTCGGAGACGCTT CAGACAAGATCGTCCTGGCAATCAATGGACACTCTCACATCGACGATGTG CTGCGAGTCAAGAATGTCACATACCTGCACGTCAACTCTGCTTCGTATCA ATGGGTGGGGGGCGACTATCAGCACGAGAGCTATTCCCGGGAAGTGCACG ACAAGCATCCTTGGGTTTCACGCACATGTCCCTACCGAGAGGCATTGTTT GCCACAATCACGGTCGAGCCCCGGAGCCTGACGATTCATGTCGAGGGACG TGTCAGCGAATGGGTCGGCAAGTCGCCCGCAGAACTTGGCGTGGATCTCG ATCCTCAACTGACCAACGGCGAGGAGATCGCAGCGAGGATTCGAAATCGT CGGGTCGTGAGAATCGTGAATTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig110409:125..598-

>mRNA_M-pyrifera_M_contig110409.2181.1 ID=mRNA_M-pyrifera_M_contig110409.2181.1|Name=mRNA_M-pyrifera_M_contig110409.2181.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=948bp|location=Sequence derived from alignment at M-pyrifera_M_contig110409:125..598- (Macrocystis pyrifera P11B4 male)
ACTCTGAAAGGCCCGATCATCGTTGTTTGTCACCAACCACTGGCGGGAGC
CTGGGCCGTTGATAACGCCGCAGAAATCCAATCCATCCTCGGAGACGCTT
CAGACAAGATCGTCCTGGCAATCAATGGACACTCTCACATCGACGATGTG
CTGCGAGTCAAGAATGTCACATACCTGCACGTCAACTCTGCTTCGTATCA
ATGGGTGGGGGGCGACTATCAGCACGAGAGCTATTCCCGGGAAGTGCACG
ACAAGCATCCTTGGGTTTCACGCACATGTCCCTACCGAGAGGCATTGTTT
GCCACAATCACGGTCGAGCCCCGGAGCCTGACGATTCATGTCGAGGGACG
TGTCAGCGAATGGGTCGGCAAGTCGCCCGCAGAACTTGGCGTGGATCTCG
ATCCTCAACTGACCAACGGCGAGGAGATCGCAGCGAGGATTCGAAATCGT
CGGGTCGTGAGAATCGTGAATTGAACTCTGAAAGGCCCGATCATCGTTGT
TTGTCACCAACCACTGGCGGGAGCCTGGGCCGTTGATAACGCCGCAGAAA
TCCAATCCATCCTCGGAGACGCTTCAGACAAGATCGTCCTGGCAATCAAT
GGACACTCTCACATCGACGATGTGCTGCGAGTCAAGAATGTCACATACCT
GCACGTCAACTCTGCTTCGTATCAATGGGTGGGGGGCGACTATCAGCACG
AGAGCTATTCCCGGGAAGTGCACGACAAGCATCCTTGGGTTTCACGCACA
TGTCCCTACCGAGAGGCATTGTTTGCCACAATCACGGTCGAGCCCCGGAG
CCTGACGATTCATGTCGAGGGACGTGTCAGCGAATGGGTCGGCAAGTCGC
CCGCAGAACTTGGCGTGGATCTCGATCCTCAACTGACCAACGGCGAGGAG
ATCGCAGCGAGGATTCGAAATCGTCGGGTCGTGAGAATCGTGAATTGA
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