mRNA_M-pyrifera_M_contig110401.2178.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig110401.2178.1
Unique NamemRNA_M-pyrifera_M_contig110401.2178.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig110401.2178.1 vs. uniprot
Match: A0A485LLH4_9STRA (Aste57867_22681 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LLH4_9STRA)

HSP 1 Score: 174 bits (440), Expect = 1.660e-49
Identity = 81/130 (62.31%), Postives = 101/130 (77.69%), Query Frame = 1
Query:   19 KVLFDAVHGPIELDERIISIVDTLEFQRLRDLKQLGTSYLVFPGASHNRFEHSLGVYHLAKSQLARFRAAQPELEVSEAEMEAMGIGAACHDLGHGPFSHVFDGEFLPRASPGTSWSHEDMSIEMLQFLV 408
            KV  D VHG I +    +SI+DT +FQRLRDLKQLGT Y VFPGASHNRFEHSLGV HLA + + RF+AAQPELE+S  ++E + +    HDLGHGPFSHV+DG F+P A P +++SHEDMS+ ML++LV
Sbjct:    3 KVFNDQVHGYISMSNLCVSIIDTPQFQRLRDLKQLGTLYYVFPGASHNRFEHSLGVAHLAGATVERFQAAQPELEISTKDVELLSVAGLVHDLGHGPFSHVYDGAFMPVARPNSTYSHEDMSLRMLEYLV 132          
BLAST of mRNA_M-pyrifera_M_contig110401.2178.1 vs. uniprot
Match: A0A1X2HJB7_SYNRA (HD phosphohydrolase domain-containing protein n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HJB7_SYNRA)

HSP 1 Score: 174 bits (440), Expect = 2.020e-49
Identity = 79/136 (58.09%), Postives = 104/136 (76.47%), Query Frame = 1
Query:    1 FYGPPSKVLFDAVHGPIELDERIISIVDTLEFQRLRDLKQLGTSYLVFPGASHNRFEHSLGVYHLAKSQLARFRAAQPELEVSEAEMEAMGIGAACHDLGHGPFSHVFDGEFLPRASPGTSWSHEDMSIEMLQFLV 408
            FYG   KV+ D +HG I+LD+  +  +DT++FQRLRDLKQLG++Y VFPGASHNRFEHS+GV HLA + + RF+  QPEL++SE+E++ + +   CHDLGHGPFSHVFD EF+PRA P   WSHE  S  +L+ L+
Sbjct:   29 FYGG-HKVINDPIHGHIQLDDYTVEFIDTVQFQRLRDLKQLGSAYFVFPGASHNRFEHSIGVSHLAGTLVERFQRDQPELDISESELKCVKLAGLCHDLGHGPFSHVFDNEFMPRARPDLDWSHEQASEMVLEHLI 163          
BLAST of mRNA_M-pyrifera_M_contig110401.2178.1 vs. uniprot
Match: A0A8H7Q0U7_9FUNG (HDc domain-containing protein n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7Q0U7_9FUNG)

HSP 1 Score: 173 bits (438), Expect = 2.810e-49
Identity = 75/130 (57.69%), Postives = 101/130 (77.69%), Query Frame = 1
Query:   19 KVLFDAVHGPIELDERIISIVDTLEFQRLRDLKQLGTSYLVFPGASHNRFEHSLGVYHLAKSQLARFRAAQPELEVSEAEMEAMGIGAACHDLGHGPFSHVFDGEFLPRASPGTSWSHEDMSIEMLQFLV 408
            K++ D +HG I+LD   I  +DT++FQRLRDLKQLG++Y VFPG SH+RFEHS+GV HL+ + + +FR+ QPELE++E E++ + +   CHDLGHGPFSHVFD EF+PRA PG  WSHE+ S  ML +L+
Sbjct:   33 KIINDPIHGHIKLDNDTIDFIDTVQFQRLRDLKQLGSAYFVFPGGSHHRFEHSIGVGHLSNTLINKFRSEQPELEITEEEVQCVTLAGLCHDLGHGPFSHVFDNEFMPRARPGIKWSHENASEMMLDYLI 162          
BLAST of mRNA_M-pyrifera_M_contig110401.2178.1 vs. uniprot
Match: A0A6G0W8C6_9STRA (HDc domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W8C6_9STRA)

HSP 1 Score: 172 bits (437), Expect = 3.530e-49
Identity = 79/132 (59.85%), Postives = 100/132 (75.76%), Query Frame = 1
Query:   13 PSKVLFDAVHGPIELDERIISIVDTLEFQRLRDLKQLGTSYLVFPGASHNRFEHSLGVYHLAKSQLARFRAAQPELEVSEAEMEAMGIGAACHDLGHGPFSHVFDGEFLPRASPGTSWSHEDMSIEMLQFLV 408
            P KV  D +HG I + E  +SI+DT +FQRLRDLKQLGT Y VFPGASHNRFEHSLGV HLA + + RF+  QPELE+++ ++E + +    HDLGHGPFSHVFDGEF+  A P  S++HE+MS+ ML +LV
Sbjct:    2 PRKVFNDQIHGYISMSELCVSIIDTPQFQRLRDLKQLGTLYYVFPGASHNRFEHSLGVAHLAGATVERFQTTQPELEITKKDVELLSVAGLVHDLGHGPFSHVFDGEFMSAARPNNSYTHEEMSLRMLDYLV 133          
BLAST of mRNA_M-pyrifera_M_contig110401.2178.1 vs. uniprot
Match: A0A068RGZ4_9FUNG (Hd phosphohydrolase domain-containing protein n=2 Tax=Lichtheimia TaxID=688353 RepID=A0A068RGZ4_9FUNG)

HSP 1 Score: 172 bits (437), Expect = 4.170e-49
Identity = 78/130 (60.00%), Postives = 101/130 (77.69%), Query Frame = 1
Query:   19 KVLFDAVHGPIELDERIISIVDTLEFQRLRDLKQLGTSYLVFPGASHNRFEHSLGVYHLAKSQLARFRAAQPELEVSEAEMEAMGIGAACHDLGHGPFSHVFDGEFLPRASPGTSWSHEDMSIEMLQFLV 408
            KV+ D +HG I LD+  I ++DT++FQRLRDLKQLG++Y VFPGASHNRFEHS+GV HLA + + RF+  QPELE+++ E++ + +   CHDLGHGPFSHVFD E +PRA PG  WSHE  S  ML++LV
Sbjct:   17 KVINDPIHGHIRLDQYTIDLMDTVQFQRLRDLKQLGSAYFVFPGASHNRFEHSIGVSHLAGTLIERFQKDQPELEITDDEVKCVKLAGLCHDLGHGPFSHVFDSEVMPRARPGFQWSHEQASEMMLEYLV 146          
BLAST of mRNA_M-pyrifera_M_contig110401.2178.1 vs. uniprot
Match: A0A1X2ICR3_9FUNG (HD phosphohydrolase domain-containing protein n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2ICR3_9FUNG)

HSP 1 Score: 172 bits (436), Expect = 6.530e-49
Identity = 75/130 (57.69%), Postives = 99/130 (76.15%), Query Frame = 1
Query:   19 KVLFDAVHGPIELDERIISIVDTLEFQRLRDLKQLGTSYLVFPGASHNRFEHSLGVYHLAKSQLARFRAAQPELEVSEAEMEAMGIGAACHDLGHGPFSHVFDGEFLPRASPGTSWSHEDMSIEMLQFLV 408
            KV+ D +HG I LDE  +S +DT++FQRLRDLKQLG++Y VFPG SHNRFEHS+GV HLA + + RF   QPEL+++E E+  + +   CHDLGHGP+SH+FD EF+PRA  G +WSHE  S  ML++L+
Sbjct:   11 KVINDPIHGHIRLDESTVSFIDTVQFQRLRDLKQLGSAYFVFPGGSHNRFEHSIGVSHLAGTLIERFEKEQPELDITEEEVRCIKLAGLCHDLGHGPYSHIFDNEFMPRAKNGLNWSHEQASEMMLEYLI 140          
BLAST of mRNA_M-pyrifera_M_contig110401.2178.1 vs. uniprot
Match: A0A024TB61_9STRA (HDc domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TB61_9STRA)

HSP 1 Score: 169 bits (428), Expect = 7.310e-48
Identity = 78/132 (59.09%), Postives = 99/132 (75.00%), Query Frame = 1
Query:   13 PSKVLFDAVHGPIELDERIISIVDTLEFQRLRDLKQLGTSYLVFPGASHNRFEHSLGVYHLAKSQLARFRAAQPELEVSEAEMEAMGIGAACHDLGHGPFSHVFDGEFLPRASPGTSWSHEDMSIEMLQFLV 408
            P KV  D +HG I +    +SI+DT +FQRLRDLKQLGT Y VFPGASHNRFEHSLGV HLA + + RFR  QP+L+++  ++E + +    HDLGHGPFSHVFDG F+  A P +S+SHEDMS+ ML++LV
Sbjct:    2 PRKVFNDQIHGYITMSPLCVSIIDTPQFQRLRDLKQLGTLYYVFPGASHNRFEHSLGVAHLAGATVERFRTNQPDLDITAKDVELLSVAGLVHDLGHGPFSHVFDGAFMMNARPSSSYSHEDMSLRMLEYLV 133          
BLAST of mRNA_M-pyrifera_M_contig110401.2178.1 vs. uniprot
Match: A0A167PUW1_PHYB8 (HD domain-containing protein n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A167PUW1_PHYB8)

HSP 1 Score: 169 bits (428), Expect = 9.240e-48
Identity = 75/130 (57.69%), Postives = 98/130 (75.38%), Query Frame = 1
Query:   19 KVLFDAVHGPIELDERIISIVDTLEFQRLRDLKQLGTSYLVFPGASHNRFEHSLGVYHLAKSQLARFRAAQPELEVSEAEMEAMGIGAACHDLGHGPFSHVFDGEFLPRASPGTSWSHEDMSIEMLQFLV 408
            K++ D +HG I LD+  I  +DT++FQRLRDLKQLG++Y VFPGASHNRFEHS+GV HL+ + + R    QPEL ++E E++ + +   CHDLGHGPFSHVFD EF+PRA PG  WSHE  S  ML++L+
Sbjct:   23 KIINDPIHGHIMLDDYTIDFIDTVQFQRLRDLKQLGSAYFVFPGASHNRFEHSIGVSHLSGTLIERIAKDQPELHITENEIKCVKLAGLCHDLGHGPFSHVFDNEFMPRARPGIKWSHEQASEMMLEYLI 152          
BLAST of mRNA_M-pyrifera_M_contig110401.2178.1 vs. uniprot
Match: A0A4P9Y4U8_9FUNG (HD phosphohydrolase domain-containing protein n=1 Tax=Piptocephalis cylindrospora TaxID=1907219 RepID=A0A4P9Y4U8_9FUNG)

HSP 1 Score: 166 bits (421), Expect = 3.000e-47
Identity = 78/130 (60.00%), Postives = 98/130 (75.38%), Query Frame = 1
Query:   19 KVLFDAVHGPIELDERIISIVDTLEFQRLRDLKQLGTSYLVFPGASHNRFEHSLGVYHLAKSQLARFRAAQPELEVSEAEMEAMGIGAACHDLGHGPFSHVFDGEFLPRASPGTSWSHEDMSIEMLQFLV 408
            KV+ D +H  I LD+    +VDT EFQRLRDLKQLG++Y VFPGASHNRFEHS+GV +LA   + RF+  QP LE++E ++  + I   CHD+GHGPFSHVFD EF+PRA PG SWSHE+ S  ML++LV
Sbjct:   10 KVVGDPIHKYIRLDDLCWDVVDTEEFQRLRDLKQLGSAYYVFPGASHNRFEHSIGVSYLAGKTVERFKNRQPGLELTEGDVRCVRIAGLCHDIGHGPFSHVFDNEFIPRARPGVSWSHEEGSEMMLEYLV 139          
BLAST of mRNA_M-pyrifera_M_contig110401.2178.1 vs. uniprot
Match: A0A418FBX8_9STRA (HDc domain-containing protein (Fragment) n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418FBX8_9STRA)

HSP 1 Score: 164 bits (414), Expect = 3.450e-47
Identity = 75/126 (59.52%), Postives = 96/126 (76.19%), Query Frame = 1
Query:   31 DAVHGPIELDERIISIVDTLEFQRLRDLKQLGTSYLVFPGASHNRFEHSLGVYHLAKSQLARFRAAQPELEVSEAEMEAMGIGAACHDLGHGPFSHVFDGEFLPRASPGTSWSHEDMSIEMLQFLV 408
            D VHG I +    +SI+DT +FQRLRDLKQLGT Y VFPG SHNRFEHSLGV HLA + + RF+  QPEL+++  +++ + +    HDLGHGPFSHVFDG F+P A P +S+SHEDMS+ ML++LV
Sbjct:    6 DQVHGYISMSPLCVSIIDTPQFQRLRDLKQLGTLYYVFPGGSHNRFEHSLGVAHLAGATVERFQINQPELDITAKDVDLLSVAGLVHDLGHGPFSHVFDGAFMPVARPNSSYSHEDMSLRMLEYLV 131          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig110401.2178.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A485LLH4_9STRA1.660e-4962.31Aste57867_22681 protein n=1 Tax=Aphanomyces stella... [more]
A0A1X2HJB7_SYNRA2.020e-4958.09HD phosphohydrolase domain-containing protein n=1 ... [more]
A0A8H7Q0U7_9FUNG2.810e-4957.69HDc domain-containing protein n=1 Tax=Umbelopsis v... [more]
A0A6G0W8C6_9STRA3.530e-4959.85HDc domain-containing protein n=1 Tax=Aphanomyces ... [more]
A0A068RGZ4_9FUNG4.170e-4960.00Hd phosphohydrolase domain-containing protein n=2 ... [more]
A0A1X2ICR3_9FUNG6.530e-4957.69HD phosphohydrolase domain-containing protein n=1 ... [more]
A0A024TB61_9STRA7.310e-4859.09HDc domain-containing protein n=1 Tax=Aphanomyces ... [more]
A0A167PUW1_PHYB89.240e-4857.69HD domain-containing protein n=1 Tax=Phycomyces bl... [more]
A0A4P9Y4U8_9FUNG3.000e-4760.00HD phosphohydrolase domain-containing protein n=1 ... [more]
A0A418FBX8_9STRA3.450e-4759.52HDc domain-containing protein (Fragment) n=3 Tax=A... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig110401contigM-pyrifera_M_contig110401:2..409 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score174.5
Seed ortholog evalue3.4e-41
Seed eggNOG ortholog78898.MVEG_07925T0
Hectar predicted targeting categoryother localisation
EggNOG free text desc.HD domain
EggNOG OGs1GSPZ@112252,38FGQ@33154,3NZMQ@4751,COG1078@1,KOG2681@2759
COG Functional cat.S
Best tax levelFungi incertae sedis
Best eggNOG OGNA|NA|NA
Exons1
Model size408
Cds size408
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815615.182158-CDS-M-pyrifera_M_contig110401:1..4091622815615.182158-CDS-M-pyrifera_M_contig110401:1..409Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig110401 2..409 -
1692277488.500195-CDS-M-pyrifera_M_contig110401:1..4091692277488.500195-CDS-M-pyrifera_M_contig110401:1..409Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig110401 2..409 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig110401.2178.1prot_M-pyrifera_M_contig110401.2178.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig110401 2..409 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig110401.2178.1

>prot_M-pyrifera_M_contig110401.2178.1 ID=prot_M-pyrifera_M_contig110401.2178.1|Name=mRNA_M-pyrifera_M_contig110401.2178.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=136bp
FYGPPSKVLFDAVHGPIELDERIISIVDTLEFQRLRDLKQLGTSYLVFPG
ASHNRFEHSLGVYHLAKSQLARFRAAQPELEVSEAEMEAMGIGAACHDLG
HGPFSHVFDGEFLPRASPGTSWSHEDMSIEMLQFLV
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mRNA from alignment at M-pyrifera_M_contig110401:2..409-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig110401.2178.1 ID=mRNA_M-pyrifera_M_contig110401.2178.1|Name=mRNA_M-pyrifera_M_contig110401.2178.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=408bp|location=Sequence derived from alignment at M-pyrifera_M_contig110401:2..409- (Macrocystis pyrifera P11B4 male)
TTCTACGGTCCGCCGAGCAAGGTATTGTTCGACGCGGTGCACGGTCCGAT CGAGTTGGACGAGCGCATCATTTCTATCGTGGACACGCTCGAGTTCCAGC GTCTGCGGGACCTGAAGCAGCTTGGGACGTCGTACCTGGTGTTTCCCGGC GCGTCGCACAACCGGTTCGAGCACAGTCTGGGCGTGTACCACCTGGCCAA GTCCCAGCTTGCCCGGTTTCGCGCTGCTCAGCCCGAGCTGGAAGTGTCCG AGGCGGAGATGGAGGCCATGGGGATTGGGGCGGCGTGCCACGATCTGGGC CACGGCCCCTTCTCGCACGTGTTCGACGGGGAGTTTTTGCCTCGCGCCAG CCCCGGCACCAGCTGGAGCCACGAGGACATGTCCATCGAGATGCTGCAGT TCCTCGTG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig110401:2..409-

>mRNA_M-pyrifera_M_contig110401.2178.1 ID=mRNA_M-pyrifera_M_contig110401.2178.1|Name=mRNA_M-pyrifera_M_contig110401.2178.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=816bp|location=Sequence derived from alignment at M-pyrifera_M_contig110401:2..409- (Macrocystis pyrifera P11B4 male)
TTCTACGGTCCGCCGAGCAAGGTATTGTTCGACGCGGTGCACGGTCCGAT
CGAGTTGGACGAGCGCATCATTTCTATCGTGGACACGCTCGAGTTCCAGC
GTCTGCGGGACCTGAAGCAGCTTGGGACGTCGTACCTGGTGTTTCCCGGC
GCGTCGCACAACCGGTTCGAGCACAGTCTGGGCGTGTACCACCTGGCCAA
GTCCCAGCTTGCCCGGTTTCGCGCTGCTCAGCCCGAGCTGGAAGTGTCCG
AGGCGGAGATGGAGGCCATGGGGATTGGGGCGGCGTGCCACGATCTGGGC
CACGGCCCCTTCTCGCACGTGTTCGACGGGGAGTTTTTGCCTCGCGCCAG
CCCCGGCACCAGCTGGAGCCACGAGGACATGTCCATCGAGATGCTGCAGT
TCCTCGTGTTCTACGGTCCGCCGAGCAAGGTATTGTTCGACGCGGTGCAC
GGTCCGATCGAGTTGGACGAGCGCATCATTTCTATCGTGGACACGCTCGA
GTTCCAGCGTCTGCGGGACCTGAAGCAGCTTGGGACGTCGTACCTGGTGT
TTCCCGGCGCGTCGCACAACCGGTTCGAGCACAGTCTGGGCGTGTACCAC
CTGGCCAAGTCCCAGCTTGCCCGGTTTCGCGCTGCTCAGCCCGAGCTGGA
AGTGTCCGAGGCGGAGATGGAGGCCATGGGGATTGGGGCGGCGTGCCACG
ATCTGGGCCACGGCCCCTTCTCGCACGTGTTCGACGGGGAGTTTTTGCCT
CGCGCCAGCCCCGGCACCAGCTGGAGCCACGAGGACATGTCCATCGAGAT
GCTGCAGTTCCTCGTG
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