mRNA_M-pyrifera_M_contig110374.2173.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig110374.2173.1 vs. uniprot
Match: A0A7Y5CCM7_9BACT (Uncharacterized protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7Y5CCM7_9BACT) HSP 1 Score: 100 bits (249), Expect = 8.820e-23 Identity = 45/119 (37.82%), Postives = 64/119 (53.78%), Query Frame = 1
Query: 43 MPNPFLFQDGRAVDGPADWPDRRAEILDLVLRHEYGRVPPAPGNVRAEDVLDNDD-------HIALKLRMGPGDGFTMRTQIYLPESGDAPHPVVVRFGLDGNRAKQITDRGYAYVCFE 378
+P+P F G+ V W RR++I+D+V R EYGR+PP+PGNV + + H + L GP M +YLP P P V+R GLD ++QI +RGYAY C++
Sbjct: 4 LPDPLRFNGGKRVKAAESWTTRRSQIVDMVTRIEYGRMPPSPGNVAVDSESPPETVNGGITTHRQVTLSFGPKQSLRMNVDLYLPRDATRPLPTVLRVGLDAGPSRQINERGYAYACYD 122
BLAST of mRNA_M-pyrifera_M_contig110374.2173.1 vs. uniprot
Match: A0A2D7HIM4_9BACT (Uncharacterized protein n=1 Tax=Rhodopirellula sp. TaxID=2024855 RepID=A0A2D7HIM4_9BACT) HSP 1 Score: 80.5 bits (197), Expect = 2.970e-15 Identity = 44/133 (33.08%), Postives = 69/133 (51.88%), Query Frame = 1
Query: 16 VASLPEIDAMPNPFLFQDGRAVDGPADWPDRRAEILDLVLRHEYGRVPP--APGNVRAEDVLDND--DHIALK----LRMGPGDGFTMRTQIYLPESGDAPHPVVVR-----FGLDGNRAKQITDRGYAYVCF 375
V LPEI+ +PNPF+F DG V+ DW RR E++ +VL +++G PP AP + A+ + + D A+K L GP + ++ I+ P++ P PV+V F +D + RGY V +
Sbjct: 32 VDELPEIEELPNPFVFLDGTPVETAEDWERRREEMIAIVLHYQFGHAPPLPAPDRINAQTISETTALDGQAVKRVVQLHFGPANAISLLLGIHAPKNRSGPFPVIVHNSSATFEVDDPIVADLVRRGYMLVSY 164
BLAST of mRNA_M-pyrifera_M_contig110374.2173.1 vs. uniprot
Match: A0A8J6M1J1_9ALTE (Dockerin-like protein n=1 Tax=Neptunicella marina TaxID=2125989 RepID=A0A8J6M1J1_9ALTE) HSP 1 Score: 73.2 bits (178), Expect = 1.230e-12 Identity = 40/124 (32.26%), Postives = 58/124 (46.77%), Query Frame = 1
Query: 16 VASLPEIDAMPNPFLFQDGRAVDGPADWPDRRAEILDLVLRHEYGRVPPAP----GNVRAEDVLDNDDHIALKLRMGPGDGFTMRTQIYLPESGDAPHPVVVRFGLDGNRAKQITDRGYAYVCF 375
++ LPEI A+PNPFL DG + +DWP RA L R E G PP P G + E + N H+ + + T+++ P G AP+P V+ G + + D G A + F
Sbjct: 49 MSQLPEITALPNPFLKTDGTTITDKSDWPCVRAHTRVLFERFELGEKPPKPQKVSGKLEGESLTVNATHLQQSI--------SFNTKVHYPSKGKAPYPAVISIGWYCLNKQALDDAGIAVIEF 164
BLAST of mRNA_M-pyrifera_M_contig110374.2173.1 vs. uniprot
Match: A0A0S8EU96_9GAMM (Hydrolase_4 domain-containing protein n=1 Tax=Gammaproteobacteria bacterium SG8_31 TaxID=1703405 RepID=A0A0S8EU96_9GAMM) HSP 1 Score: 67.4 bits (163), Expect = 1.500e-10 Identity = 40/122 (32.79%), Postives = 63/122 (51.64%), Query Frame = 1
Query: 22 SLPEIDAMPNPFLFQDGRAVDGPADWPDRRAEILDLVLRHEYGRVPPAPGNVRAEDVLDNDDH----IALKLRMGPGDGFTMRTQIYLPESGDAPHPVVVRFGLDGNRAKQITDRGYAYVCF 375
+LP I+++P+ F F +GR V+ P DW DRRAEI L ++ +G +PP P + D+ + + + + L +GP I LPE G P PV++ + + RGYA V +
Sbjct: 60 ALPRINSLPDAFCFLNGRRVETPGDWADRRAEIQQLFEKYIFGTIPPRPA-IHHADMQETEGNGYRTREVTLHLGPDGKVEYGFSIILPE-GSGPFPVLMT--PSRSDIPTLIRRGYAGVSY 177
BLAST of mRNA_M-pyrifera_M_contig110374.2173.1 vs. uniprot
Match: A0A842R602_9ARCH (Uncharacterized protein n=1 Tax=Candidatus Bathyarchaeota archaeon TaxID=2026714 RepID=A0A842R602_9ARCH) HSP 1 Score: 64.7 bits (156), Expect = 1.180e-9 Identity = 36/126 (28.57%), Postives = 57/126 (45.24%), Query Frame = 1
Query: 43 MPNPFLFQDGRAVDGPADWPDRRAEILDLVLRHEYGRVPPAPGNVRAEDVLD---NDDHI-------ALKLRMGPGDGFTMRTQIYLPESGDAPHPVVVRFGLDGNRAKQ-----ITDRGYAYVCF 375
P+PF+F +G AV+ DW RR EI +++L +YG P P + ++ D I + + P F +Y+P G P P +V+ DG +++ IT GY Y C+
Sbjct: 40 FPDPFIFNNGTAVETVHDWQMRREEIKEMILDIQYGHPPARPDALNVTNISSVTRPDGSIFSTVILTVIPSNITPSSSFNFTLDLYVPP-GIGPFPAIVKVSKDGTGSQEPNNSTITSHGYIYACY 164
BLAST of mRNA_M-pyrifera_M_contig110374.2173.1 vs. uniprot
Match: A0A7V3T761_9BACT (Hydrolase_4 domain-containing protein n=1 Tax=Verrucomicrobia subdivision 3 bacterium TaxID=2052186 RepID=A0A7V3T761_9BACT) HSP 1 Score: 61.6 bits (148), Expect = 1.570e-8 Identity = 41/122 (33.61%), Postives = 59/122 (48.36%), Query Frame = 1
Query: 28 PEIDAMPN-PFLFQDGRAVDGPA----DWPDRRAEILDLVLRHEYGRVPPAPGNVRAEDVLDNDD------HIALKLRMGPGDGFTMRTQIYLPESGDAPHPVVVRFGLDGNRAKQITDRGY 360
P+ +A+P+ PFL R DG WP +RA++L+L R+ G PP+PGNVRA DV + H+ L R GP + ++ +P G P PV + + A RGY
Sbjct: 83 PDFEALPSVPFLPDPLRRADGSLATREQWPQQRADLLNLFQRYVLGTAPPSPGNVRATDVRTRQELGSTVQHVTL--RFGPNYQAQLHLELIIPP-GPGPFPVFLTPEPHRSWALVAVSRGY 201
BLAST of mRNA_M-pyrifera_M_contig110374.2173.1 vs. uniprot
Match: A0A7C6HKQ8_9CLOT (Acetylxylan esterase n=1 Tax=Clostridiaceae bacterium TaxID=1898204 RepID=A0A7C6HKQ8_9CLOT) HSP 1 Score: 60.8 bits (146), Expect = 2.500e-8 Identity = 42/138 (30.43%), Postives = 65/138 (47.10%), Query Frame = 1
Query: 4 ISERVASLPEIDAMPNPFLFQDGRAVDGPADWPDRRAEILDLVLRHEYGRVPPAPGNVRAEDV--LDND-----DHIALKLRMGPGDG-FTMRTQIYLPESGDAPHPVVVRFGLDGN------RAKQITDRGYAYVCF 375
I+ER+ L +P F F DG V+ DW RR EI+D++L+ EYG +PP P NV +D+ + ND +H+ L G F+ + P+ G+ +P VV + A+++ D G F
Sbjct: 2 INERLMQL----NLPKLFKFDDGSTVENVNDWERRRDEIIDVILKEEYGTIPPRPDNVFVKDMRRVHNDFAGKGEHLIYDLCFMTERGEFSFPVNVVKPK-GNKKNPAVVHIAFRPDIPDKYYPAEEVLDLGLTVFTF 134
BLAST of mRNA_M-pyrifera_M_contig110374.2173.1 vs. uniprot
Match: A0A3M1TUJ3_9BACT (Acetylxylan esterase (Fragment) n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A3M1TUJ3_9BACT) HSP 1 Score: 60.5 bits (145), Expect = 2.750e-8 Identity = 36/106 (33.96%), Postives = 57/106 (53.77%), Query Frame = 1
Query: 43 MPNPFLFQDGRAVDGPADWPDRRAEILDLVLRHEYGRVPPAPGNVRAE-----DVLDNDDHIALKLRMG-PGDGFTMRTQ--IYLPESGDAPHPVVVRFGLDGNRA 336
+P+P ++++G+ + PADWP RRAEIL+L YGRVP AP ++A+ V N I ++ + +G ++ Q IYLP PV + + GN +
Sbjct: 51 LPDPLVWENGQRLSDPADWPARRAEILELFATQVYGRVPQAPYQMKAKVRSVNPVALNKTAIRKEVELEFRANGRKLKAQLLIYLPAGQVDRVPVFLAYNFYGNHS 156
BLAST of mRNA_M-pyrifera_M_contig110374.2173.1 vs. uniprot
Match: C6VY01_DYAFD (Putative acetyl xylan esterase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / CIP 107007 / KCTC 52180 / NS114) TaxID=471854 RepID=C6VY01_DYAFD) HSP 1 Score: 58.2 bits (139), Expect = 2.340e-7 Identity = 36/122 (29.51%), Postives = 52/122 (42.62%), Query Frame = 1
Query: 13 RVASLPEIDAMPNPFLFQDGRAVDGPADWPDRRAEILDLVLRHEYGRVPPAPGNVRAEDVLDNDD--------------HIALKLRMGPGDGFTMRTQIYLPESGDAPHPVVVRFGLDGNRA 336
+++ ++ +P+P LF +G+ V DW RR EI + + R YG P P N+R E V D D HI K R D IY+P P P ++ GN+A
Sbjct: 18 KLSHAQDVQRLPDPLLFNNGKKVKSAKDWERRRQEIRETMTREMYGAAPQQPKNMRFE-VFDLDKNALGGKATRKQVTIHITEKGRQAKFDLL-----IYIPNQAKQPVPAIIGLNFIGNQA 133
BLAST of mRNA_M-pyrifera_M_contig110374.2173.1 vs. uniprot
Match: UPI001A98E31F (alpha/beta fold hydrolase n=1 Tax=Halovivax sp. KZCA124 TaxID=2817025 RepID=UPI001A98E31F) HSP 1 Score: 58.2 bits (139), Expect = 2.570e-7 Identity = 37/124 (29.84%), Postives = 55/124 (44.35%), Query Frame = 1
Query: 25 LPEIDAMPNPFLFQDGRA---VDGPADWPDRRAEILDLVLRHEYGRVPPAPGNVRAEDVLDNDDHIA----LKLRMGPGDGFTMRTQIYLPESGDAPHPVVVRFGLDGNRAKQITDRGYAYVCF 375
LP +P+P DG + P W +R I + + YGR+PPAPGNVRA ++ A ++L GP + Q+ +P+ G P PV N A+ RGY + +
Sbjct: 78 LPATADLPDPLERYDGERWAEISTPEAWNRQRERIGEQLQYWLYGRMPPAPGNVRATEIGTQPAEGATVRDVRLEFGPDHELELHLQVMIPD-GQGPFPVFATQWNHRNWAQLALQRGYVAIVY 200 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig110374.2173.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig110374.2173.1 >prot_M-pyrifera_M_contig110374.2173.1 ID=prot_M-pyrifera_M_contig110374.2173.1|Name=mRNA_M-pyrifera_M_contig110374.2173.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=126bp PISERVASLPEIDAMPNPFLFQDGRAVDGPADWPDRRAEILDLVLRHEYGback to top mRNA from alignment at M-pyrifera_M_contig110374:204..581+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig110374.2173.1 ID=mRNA_M-pyrifera_M_contig110374.2173.1|Name=mRNA_M-pyrifera_M_contig110374.2173.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=378bp|location=Sequence derived from alignment at M-pyrifera_M_contig110374:204..581+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig110374:204..581+ >mRNA_M-pyrifera_M_contig110374.2173.1 ID=mRNA_M-pyrifera_M_contig110374.2173.1|Name=mRNA_M-pyrifera_M_contig110374.2173.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=756bp|location=Sequence derived from alignment at M-pyrifera_M_contig110374:204..581+ (Macrocystis pyrifera P11B4 male)back to top |