mRNA_M-pyrifera_M_contig110358.2167.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig110358.2167.1
Unique NamemRNA_M-pyrifera_M_contig110358.2167.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig110358.2167.1 vs. uniprot
Match: A0A7S0JUS1_CAFRO (Hypothetical protein (Fragment) n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0JUS1_CAFRO)

HSP 1 Score: 121 bits (304), Expect = 7.730e-30
Identity = 71/158 (44.94%), Postives = 102/158 (64.56%), Query Frame = 1 
Query:    1 EVKRRGALMKARRRIEEKMEAFKDYERDAKTKAYSREGLARAAEKELSPEEQAKEDSLNWIRQTVSTLNDQIDELEASAEEEERKRKPDAELVEELETAVSNHRFHIENLETMARLLENEGLSPEDADSMKDELEYYLECYREPEFEMDLEAYDRLNL 474
            E+K++  L+  RR IEEKMEAFK  E + K K YSR G+   A  EL  E  A++D+ +++  T++ L+ QIDELEA  E E  KR+PD +L+  LE  + NH  HI  +E + RLL+N  +  ED  S++D+L YY+E  REP+F  D+E YDR ++
Sbjct:   80 EIKQKDPLVNCRRAIEEKMEAFKTLEYETKHKTYSRAGMT--ASGELDEEGLARKDARDFLSATIADLSAQIDELEADMETERSKRRPDTKLLASLEETLGNHHTHIHRIEQLTRLLDNLVIPHEDITSIRDDLTYYVESNREPDFAPDMELYDRFDV 235
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BLAST of mRNA_M-pyrifera_M_contig110358.2167.1 vs. uniprot
Match: A0A5A8D252_CAFRO (Uncharacterized protein n=5 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D252_CAFRO)

HSP 1 Score: 121 bits (304), Expect = 1.460e-28
Identity = 71/158 (44.94%), Postives = 102/158 (64.56%), Query Frame = 1 
Query:    1 EVKRRGALMKARRRIEEKMEAFKDYERDAKTKAYSREGLARAAEKELSPEEQAKEDSLNWIRQTVSTLNDQIDELEASAEEEERKRKPDAELVEELETAVSNHRFHIENLETMARLLENEGLSPEDADSMKDELEYYLECYREPEFEMDLEAYDRLNL 474
            E+K++  L+  RR IEEKMEAFK  E + K K YSR G+   A  EL  E  A++D+ +++  T++ L+ QIDELEA  E E  KR+PD +L+  LE  + NH  HI  +E + RLL+N  +  ED  S++D+L YY+E  REP+F  D+E YDR ++
Sbjct:   70 EIKQKDPLVNCRRAIEEKMEAFKTLEYETKHKTYSRAGMT--ASGELDEEGLARKDARDFLSATIADLSAQIDELEADMETERSKRRPDTKLLASLEETLGNHHTHIHRIEQLTRLLDNLVIPHEDITSIRDDLTYYVESNREPDFAPDMELYDRFDV 225
[Close]
BLAST of mRNA_M-pyrifera_M_contig110358.2167.1 vs. uniprot
Match: A0A7S1G7A2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G7A2_9STRA)

HSP 1 Score: 115 bits (288), Expect = 3.610e-28
Identity = 75/166 (45.18%), Postives = 108/166 (65.06%), Query Frame = 1 
Query:    1 EVKRRGALMKARRRIEEKMEAFKDYERDAKTKAYSREGLARAAEKELSPEEQAKEDSLNWIRQTVSTLNDQIDELEASAEE--EERKRKPDAELVEELETAVSNHRFHIENLETMARLLENEGLSPEDADSMKDELEYYLECYREPEFEMDLEAYDRLNLGSRTAG 492
            E+K +  L+ AR+ IE KMEAFK  ER+ KTKAYS+EGLA+AA+  L PE+ AK  + +++++ +  L  Q+D +EA  E+    RK+K  A  +  L+  ++NHRFHIE LE  ARLL+N+ +     D +KD++EYY+    E +F +DLE YD L  G  TAG
Sbjct:   70 EIKDKRQLLDARKLIETKMEAFKVCERETKTKAYSKEGLAQAAK--LDPEQVAKAATRDFLQECIDQLGIQVDAVEAEQEQISSGRKKKGQASELAALDEKLANHRFHIEKLEQAARLLDNDSIDHAAVDELKDDIEYYITDNGEDDFYVDLEIYDVL--GMDTAG 231
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BLAST of mRNA_M-pyrifera_M_contig110358.2167.1 vs. uniprot
Match: A0A6A4Y5Y6_9STRA (Not3 domain-containing protein (Fragment) n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4Y5Y6_9STRA)

HSP 1 Score: 113 bits (283), Expect = 2.210e-27
Identity = 72/170 (42.35%), Postives = 112/170 (65.88%), Query Frame = 1 
Query:    1 EVKRRGALMKARRRIEEKMEAFKDYERDAKTKAYSREGLARAAEKELSPEEQAKEDSLNWIRQTVSTLNDQIDELEASAEE----EERKRKPDAELVEELETAVSNHRFHIENLETMARLLENEGLSPEDADSMKDELEYYLECYREPEFEMDL----EAYDRLNLGSRT 486
            +VK +  L  ARR IE KME FK  E++ KTKAYS+EGLA+A  + L P EQAK+++++WI+ +++   DQI+ +E   E+    + +K K D   +E LE  ++ H++H+  LE +ARLL+N+ + P D D +KD+++YYLE  +EP+F MD     + Y+ L+L S T
Sbjct:   70 DVKDKRPLTDARRLIESKMEEFKVCEKETKTKAYSKEGLAQA--ERLDPAEQAKQNTISWIQDSLTQFADQIETMECEIEKLRGNKGKKNKTD---MENLELLIARHKWHVLKLEQIARLLDNDAIDPADVDGLKDDIDYYLEANQEPDF-MDTYGEDDIYEVLDLDSLT 233
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BLAST of mRNA_M-pyrifera_M_contig110358.2167.1 vs. uniprot
Match: A0A671XN17_SPAAU (CCR4-NOT transcription complex subunit 3 n=1 Tax=Sparus aurata TaxID=8175 RepID=A0A671XN17_SPAAU)

HSP 1 Score: 114 bits (284), Expect = 3.820e-26
Identity = 68/175 (38.86%), Postives = 113/175 (64.57%), Query Frame = 1 
Query:    1 EVKRRGALMKARRRIEEKMEAFKDYERDAKTKAYSREGLARAAEKELSPEEQAKEDSLNWIRQTVSTLNDQIDELEASAEE---EERKRKPDAEL---VEELETAVSNHRFHIENLETMARLLENEGLSPEDADSMKDELEYYLECYREPEFEMDLEAYDRLNLGSRTAGVLATA 507
            E+K +  L++ R+ IE +ME FK  ER+ KTKAYS+EGL  A  +++ P ++ KE++  W+  T+ TLN Q+D+ E+  E    + RK+K D E    +EEL+  +  HRFHI  LET+ R+L+N+ ++ +    +KD++EYY++  ++P+FE +   YD L+L    A ++AT+
Sbjct:   70 EIKDKRQLVENRKLIETQMERFKVVERETKTKAYSKEGLGLA--QKVDPAQREKEETGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKEKQDRIEELKRLIERHRFHIRMLETILRMLDNDSIAVDSIQKIKDDVEYYIDSSQDPDFEENEFLYDDLDLEDIPAALVATS 242
[Close]
BLAST of mRNA_M-pyrifera_M_contig110358.2167.1 vs. uniprot
Match: A0A4Z2CEM0_9TELE (Not3 domain-containing protein n=1 Tax=Takifugu bimaculatus TaxID=433685 RepID=A0A4Z2CEM0_9TELE)

HSP 1 Score: 113 bits (283), Expect = 5.080e-26
Identity = 68/175 (38.86%), Postives = 112/175 (64.00%), Query Frame = 1 
Query:    1 EVKRRGALMKARRRIEEKMEAFKDYERDAKTKAYSREGLARAAEKELSPEEQAKEDSLNWIRQTVSTLNDQIDELEASAEE---EERKRKPDAEL---VEELETAVSNHRFHIENLETMARLLENEGLSPEDADSMKDELEYYLECYREPEFEMDLEAYDRLNLGSRTAGVLATA 507
            E+K +  L++ R+ IE +ME FK  ER+ KTKAYS+EGL  A  +++ P ++ KE++  W+  T+ TLN Q+D+ E+  E    + RK+K D E    +EEL+  +  HRFHI  LET+ R+L+N+ +  +    +KD++EYY++  ++P+FE +   YD L+L    A ++AT+
Sbjct:   70 EIKDKRQLIENRKLIETQMERFKVVERETKTKAYSKEGLGLA--QKVDPAQREKEETGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKSDKEKQDRIEELKRLIERHRFHIRMLETILRMLDNDSIPVDSIQKIKDDVEYYIDSSQDPDFEENEFLYDDLDLEDIPAALVATS 242
[Close]
BLAST of mRNA_M-pyrifera_M_contig110358.2167.1 vs. uniprot
Match: A0A671XGF9_SPAAU (CCR4-NOT transcription complex subunit 3 n=2 Tax=Percomorphaceae TaxID=1489872 RepID=A0A671XGF9_SPAAU)

HSP 1 Score: 114 bits (284), Expect = 7.400e-26
Identity = 68/175 (38.86%), Postives = 113/175 (64.57%), Query Frame = 1 
Query:    1 EVKRRGALMKARRRIEEKMEAFKDYERDAKTKAYSREGLARAAEKELSPEEQAKEDSLNWIRQTVSTLNDQIDELEASAEE---EERKRKPDAEL---VEELETAVSNHRFHIENLETMARLLENEGLSPEDADSMKDELEYYLECYREPEFEMDLEAYDRLNLGSRTAGVLATA 507
            E+K +  L++ R+ IE +ME FK  ER+ KTKAYS+EGL  A  +++ P ++ KE++  W+  T+ TLN Q+D+ E+  E    + RK+K D E    +EEL+  +  HRFHI  LET+ R+L+N+ ++ +    +KD++EYY++  ++P+FE +   YD L+L    A ++AT+
Sbjct:   70 EIKDKRQLVENRKLIETQMERFKVVERETKTKAYSKEGLGLA--QKVDPAQREKEETGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKEKQDRIEELKRLIERHRFHIRMLETILRMLDNDSIAVDSIQKIKDDVEYYIDSSQDPDFEENEFLYDDLDLEDIPAALVATS 242
[Close]
BLAST of mRNA_M-pyrifera_M_contig110358.2167.1 vs. uniprot
Match: A0A671XGK4_SPAAU (CCR4-NOT transcription complex subunit 3 n=1 Tax=Sparus aurata TaxID=8175 RepID=A0A671XGK4_SPAAU)

HSP 1 Score: 114 bits (284), Expect = 7.910e-26
Identity = 68/175 (38.86%), Postives = 113/175 (64.57%), Query Frame = 1 
Query:    1 EVKRRGALMKARRRIEEKMEAFKDYERDAKTKAYSREGLARAAEKELSPEEQAKEDSLNWIRQTVSTLNDQIDELEASAEE---EERKRKPDAEL---VEELETAVSNHRFHIENLETMARLLENEGLSPEDADSMKDELEYYLECYREPEFEMDLEAYDRLNLGSRTAGVLATA 507
            E+K +  L++ R+ IE +ME FK  ER+ KTKAYS+EGL  A  +++ P ++ KE++  W+  T+ TLN Q+D+ E+  E    + RK+K D E    +EEL+  +  HRFHI  LET+ R+L+N+ ++ +    +KD++EYY++  ++P+FE +   YD L+L    A ++AT+
Sbjct:   70 EIKDKRQLVENRKLIETQMERFKVVERETKTKAYSKEGLGLA--QKVDPAQREKEETGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKEKQDRIEELKRLIERHRFHIRMLETILRMLDNDSIAVDSIQKIKDDVEYYIDSSQDPDFEENEFLYDDLDLEDIPAALVATS 242
[Close]
BLAST of mRNA_M-pyrifera_M_contig110358.2167.1 vs. uniprot
Match: A0A8C4DR86_DICLA (CCR4-NOT transcription complex, subunit 3a n=1 Tax=Dicentrarchus labrax TaxID=13489 RepID=A0A8C4DR86_DICLA)

HSP 1 Score: 114 bits (284), Expect = 8.010e-26
Identity = 68/175 (38.86%), Postives = 113/175 (64.57%), Query Frame = 1 
Query:    1 EVKRRGALMKARRRIEEKMEAFKDYERDAKTKAYSREGLARAAEKELSPEEQAKEDSLNWIRQTVSTLNDQIDELEASAEE---EERKRKPDAEL---VEELETAVSNHRFHIENLETMARLLENEGLSPEDADSMKDELEYYLECYREPEFEMDLEAYDRLNLGSRTAGVLATA 507
            E+K +  L++ R+ IE +ME FK  ER+ KTKAYS+EGL  A  +++ P ++ KE++  W+  T+ TLN Q+D+ E+  E    + RK+K D E    +EEL+  +  HRFHI  LET+ R+L+N+ ++ +    +KD++EYY++  ++P+FE +   YD L+L    A ++AT+
Sbjct:   70 EIKDKRQLVENRKLIETQMERFKVVERETKTKAYSKEGLGLA--QKVDPAQREKEETGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKEKQDRIEELKRMIERHRFHIRMLETILRMLDNDSIAVDSIQKIKDDVEYYIDSSQDPDFEENEFLYDDLDLEDIPAALVATS 242
[Close]
BLAST of mRNA_M-pyrifera_M_contig110358.2167.1 vs. uniprot
Match: A0A0F8B7T7_LARCR (CCR4-NOT transcription complex subunit 3 n=5 Tax=Larimichthys crocea TaxID=215358 RepID=A0A0F8B7T7_LARCR)

HSP 1 Score: 114 bits (284), Expect = 8.380e-26
Identity = 68/175 (38.86%), Postives = 113/175 (64.57%), Query Frame = 1 
Query:    1 EVKRRGALMKARRRIEEKMEAFKDYERDAKTKAYSREGLARAAEKELSPEEQAKEDSLNWIRQTVSTLNDQIDELEASAEE---EERKRKPDAEL---VEELETAVSNHRFHIENLETMARLLENEGLSPEDADSMKDELEYYLECYREPEFEMDLEAYDRLNLGSRTAGVLATA 507
            E+K +  L++ R+ IE +ME FK  ER+ KTKAYS+EGL  A  +++ P ++ KE++  W+  T+ TLN Q+D+ E+  E    + RK+K D E    +EEL+  +  HRFHI  LET+ R+L+N+ ++ +    +KD++EYY++  ++P+FE +   YD L+L    A ++AT+
Sbjct:   70 EIKDKRQLVENRKLIETQMERFKVVERETKTKAYSKEGLGLA--QKVDPAQREKEETGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKEKQDRIEELKRLIERHRFHIRMLETILRMLDNDSIAVDSIQKIKDDVEYYIDSSQDPDFEENEFLYDDLDLEDIPAALVATS 242
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig110358.2167.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S0JUS1_CAFRO7.730e-3044.94Hypothetical protein (Fragment) n=1 Tax=Cafeteria ... [more]
A0A5A8D252_CAFRO1.460e-2844.94Uncharacterized protein n=5 Tax=Cafeteria roenberg... [more]
A0A7S1G7A2_9STRA3.610e-2845.18Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A6A4Y5Y6_9STRA2.210e-2742.35Not3 domain-containing protein (Fragment) n=1 Tax=... [more]
A0A671XN17_SPAAU3.820e-2638.86CCR4-NOT transcription complex subunit 3 n=1 Tax=S... [more]
A0A4Z2CEM0_9TELE5.080e-2638.86Not3 domain-containing protein n=1 Tax=Takifugu bi... [more]
A0A671XGF9_SPAAU7.400e-2638.86CCR4-NOT transcription complex subunit 3 n=2 Tax=P... [more]
A0A671XGK4_SPAAU7.910e-2638.86CCR4-NOT transcription complex subunit 3 n=1 Tax=S... [more]
A0A8C4DR86_DICLA8.010e-2638.86CCR4-NOT transcription complex, subunit 3a n=1 Tax... [more]
A0A0F8B7T7_LARCR8.380e-2638.86CCR4-NOT transcription complex subunit 3 n=5 Tax=L... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig110358contigM-pyrifera_M_contig110358:11..595 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score113.2
Seed ortholog evalue1.3e-22
Seed eggNOG ortholog112098.XP_008614187.1
Preferred nameCNOT3
KEGG koko:K12580
KEGG Pathwayko03018,map03018
Hectar predicted targeting categoryother localisation
GOsGO:0000075,GO:0000077,GO:0000175,GO:0000278,GO:0000288,GO:0000289,GO:0000290,GO:0000932,GO:0000956,GO:0001701,GO:0001824,GO:0001825,GO:0001829,GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004535,GO:0004540,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006354,GO:0006355,GO:0006357,GO:0006366,GO:0006368,GO:0006401,GO:0006402,GO:0006417,GO:0006464,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006977,GO:0007049,GO:0007093,GO:0007154,GO:0007165,GO:0007275,GO:0007346,GO:0008150,GO:0008152,GO:0008408,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009653,GO:0009790,GO:0009792,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009966,GO:0009968,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010564,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0010646,GO:0010648,GO:0010810,GO:0010811,GO:0010948,GO:0016070,GO:0016071,GO:0016567,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0017148,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019439,GO:0019538,GO:0022402,GO:0023051,GO:0023052,GO:0023057,GO:0030014,GO:0030015,GO:0030154,GO:0030155,GO:0030330,GO:0030447,GO:0031086,GO:0031087,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031570,GO:0031571,GO:0032268,GO:0032269,GO:0032446,GO:0032501,GO:0032502,GO:0032774,GO:0032784,GO:0032786,GO:0032968,GO:0032991,GO:0033143,GO:0033144,GO:0033146,GO:0033147,GO:0033554,GO:0034243,GO:0034248,GO:0034249,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0035556,GO:0035770,GO:0036211,GO:0036464,GO:0040007,GO:0042710,GO:0042770,GO:0043009,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043412,GO:0043900,GO:0043902,GO:0044010,GO:0044011,GO:0044182,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044764,GO:0044773,GO:0044774,GO:0044783,GO:0044819,GO:0045785,GO:0045786,GO:0045787,GO:0045893,GO:0045930,GO:0045935,GO:0045944,GO:0046483,GO:0046700,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0048646,GO:0048856,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051239,GO:0051246,GO:0051248,GO:0051252,GO:0051254,GO:0051703,GO:0051704,GO:0051716,GO:0051726,GO:0060255,GO:0065007,GO:0070647,GO:0071156,GO:0071158,GO:0071704,GO:0072331,GO:0072395,GO:0072401,GO:0072413,GO:0072422,GO:0072431,GO:0080090,GO:0090068,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0090605,GO:0090609,GO:0097659,GO:0140098,GO:1900187,GO:1900189,GO:1900190,GO:1900192,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901575,GO:1901576,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902400,GO:1902402,GO:1902403,GO:1902680,GO:1902806,GO:1902807,GO:1903047,GO:1903506,GO:1903508,GO:1990904,GO:2000036,GO:2000045,GO:2000112,GO:2000113,GO:2000134,GO:2001141
EggNOG free text desc.nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
EggNOG OGsCOG5665@1,KOG2150@2759
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019
Exons1
Model size585
Cds size561
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815614.727629-CDS-M-pyrifera_M_contig110358:10..5711622815614.727629-CDS-M-pyrifera_M_contig110358:10..571Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig110358 11..571 -
1692277488.3068986-CDS-M-pyrifera_M_contig110358:10..5711692277488.3068986-CDS-M-pyrifera_M_contig110358:10..571Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig110358 11..571 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815614.7375445-UTR-M-pyrifera_M_contig110358:571..5951622815614.7375445-UTR-M-pyrifera_M_contig110358:571..595Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig110358 572..595 -
1692277488.317387-UTR-M-pyrifera_M_contig110358:571..5951692277488.317387-UTR-M-pyrifera_M_contig110358:571..595Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig110358 572..595 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig110358.2167.1prot_M-pyrifera_M_contig110358.2167.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig110358 11..571 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig110358.2167.1

>prot_M-pyrifera_M_contig110358.2167.1 ID=prot_M-pyrifera_M_contig110358.2167.1|Name=mRNA_M-pyrifera_M_contig110358.2167.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=187bp
MKARRRIEEKMEAFKDYERDAKTKAYSREGLARAAEKELSPEEQAKEDSL
NWIRQTVSTLNDQIDELEASAEEEERKRKPDAELVEELETAVSNHRFHIE
NLETMARLLENEGLSPEDADSMKDELEYYLECYREPEFEMDLEAYDRLNL
GSRTAGVLATATVAAVAIPTSESDSSSSSSSSSSSSS
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mRNA from alignment at M-pyrifera_M_contig110358:11..595-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig110358.2167.1 ID=mRNA_M-pyrifera_M_contig110358.2167.1|Name=mRNA_M-pyrifera_M_contig110358.2167.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=585bp|location=Sequence derived from alignment at M-pyrifera_M_contig110358:11..595- (Macrocystis pyrifera P11B4 male)
GAAGTAAAACGGCGGGGTGCGTTGATGAAAGCTCGAAGACGTATTGAAGA
GAAGATGGAGGCTTTCAAGGACTATGAAAGGGATGCAAAAACCAAAGCAT
ACAGCCGGGAAGGGCTTGCAAGAGCTGCTGAGAAGGAGTTATCGCCCGAA
GAACAGGCAAAAGAGGATAGTTTGAACTGGATTCGTCAAACTGTGTCAAC
GTTGAACGATCAGATTGATGAACTGGAAGCTTCTGCGGAAGAAGAAGAAA
GGAAGCGAAAACCAGACGCTGAATTGGTCGAAGAGTTGGAAACTGCAGTG
AGCAATCATCGGTTTCATATTGAAAATTTGGAAACGATGGCTCGGTTGTT
GGAGAATGAAGGATTGAGTCCTGAGGATGCAGATTCTATGAAAGATGAGC
TGGAATATTACTTGGAATGTTACAGAGAACCAGAGTTTGAAATGGACCTT
GAAGCCTATGATCGTCTCAACCTCGGCAGTAGAACTGCAGGAGTGTTAGC
AACAGCGACGGTTGCTGCAGTTGCCATTCCAACATCCGAATCTGATTCTT
CTTCCTCCTCCTCTTCCTCTTCCTCCTCCTCTTCT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig110358:11..595-

>mRNA_M-pyrifera_M_contig110358.2167.1 ID=mRNA_M-pyrifera_M_contig110358.2167.1|Name=mRNA_M-pyrifera_M_contig110358.2167.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1122bp|location=Sequence derived from alignment at M-pyrifera_M_contig110358:11..595- (Macrocystis pyrifera P11B4 male)
ATGAAAGCTCGAAGACGTATTGAAGAGAAGATGGAGGCTTTCAAGGACTA
TGAAAGGGATGCAAAAACCAAAGCATACAGCCGGGAAGGGCTTGCAAGAG
CTGCTGAGAAGGAGTTATCGCCCGAAGAACAGGCAAAAGAGGATAGTTTG
AACTGGATTCGTCAAACTGTGTCAACGTTGAACGATCAGATTGATGAACT
GGAAGCTTCTGCGGAAGAAGAAGAAAGGAAGCGAAAACCAGACGCTGAAT
TGGTCGAAGAGTTGGAAACTGCAGTGAGCAATCATCGGTTTCATATTGAA
AATTTGGAAACGATGGCTCGGTTGTTGGAGAATGAAGGATTGAGTCCTGA
GGATGCAGATTCTATGAAAGATGAGCTGGAATATTACTTGGAATGTTACA
GAGAACCAGAGTTTGAAATGGACCTTGAAGCCTATGATCGTCTCAACCTC
GGCAGTAGAACTGCAGGAGTGTTAGCAACAGCGACGGTTGCTGCAGTTGC
CATTCCAACATCCGAATCTGATTCTTCTTCCTCCTCCTCTTCCTCTTCCT
CCTCCTCTTCTATGAAAGCTCGAAGACGTATTGAAGAGAAGATGGAGGCT
TTCAAGGACTATGAAAGGGATGCAAAAACCAAAGCATACAGCCGGGAAGG
GCTTGCAAGAGCTGCTGAGAAGGAGTTATCGCCCGAAGAACAGGCAAAAG
AGGATAGTTTGAACTGGATTCGTCAAACTGTGTCAACGTTGAACGATCAG
ATTGATGAACTGGAAGCTTCTGCGGAAGAAGAAGAAAGGAAGCGAAAACC
AGACGCTGAATTGGTCGAAGAGTTGGAAACTGCAGTGAGCAATCATCGGT
TTCATATTGAAAATTTGGAAACGATGGCTCGGTTGTTGGAGAATGAAGGA
TTGAGTCCTGAGGATGCAGATTCTATGAAAGATGAGCTGGAATATTACTT
GGAATGTTACAGAGAACCAGAGTTTGAAATGGACCTTGAAGCCTATGATC
GTCTCAACCTCGGCAGTAGAACTGCAGGAGTGTTAGCAACAGCGACGGTT
GCTGCAGTTGCCATTCCAACATCCGAATCTGATTCTTCTTCCTCCTCCTC
TTCCTCTTCCTCCTCCTCTTCT
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