mRNA_M-pyrifera_M_contig110342.2162.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig110342.2162.1
Unique NamemRNA_M-pyrifera_M_contig110342.2162.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig110342.2162.1 vs. uniprot
Match: A0A8J4Q0S1_9MYCE (Arp2/3 complex 34 kDa subunit n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4Q0S1_9MYCE)

HSP 1 Score: 132 bits (332), Expect = 3.640e-35
Identity = 65/142 (45.77%), Postives = 94/142 (66.20%), Query Frame = 1
Query:   10 DKLALKISNLKRHVGGAPFKKMFEQILAKNAAPDIWKVSYRENEAIYLKPEGDRCTAIFSVSFKDADDAVYAKVFLQEFADARRSMNNVPAVKFTYKELPMELESYPGVEGVETNGFVSMVLFEPQMHARNVFKTINLLQNF 435
            D+LA K+  LKR++  APF  +FE + +K A PDI  + YR +E+ Y+KP+GD    +F ++FKDADD V +K+FLQ F DAR++MNN P+V F+ K+ P+EL+   GV     +GFVS VLF    H +   +T +L+Q F
Sbjct:  100 DELAKKVGLLKRNLVAAPFLMVFEGVESKKALPDIITIDYRSDESFYIKPQGDNVIVVFDITFKDADDVVLSKIFLQSFVDARKTMNNTPSVTFSQKDPPLELKGVKGVRTGAHHGFVSFVLFPA--HLKKPQETADLIQTF 239          
BLAST of mRNA_M-pyrifera_M_contig110342.2162.1 vs. uniprot
Match: D3BN12_POLPP (Arp2/3 complex 34 kDa subunit n=2 Tax=Acytosteliaceae TaxID=2058183 RepID=D3BN12_POLPP)

HSP 1 Score: 128 bits (321), Expect = 1.520e-33
Identity = 63/145 (43.45%), Postives = 95/145 (65.52%), Query Frame = 1
Query:    1 PFSDKLALKISNLKRHVGGAPFKKMFEQILAKNAAPDIWKVSYRENEAIYLKPEGDRCTAIFSVSFKDADDAVYAKVFLQEFADARRSMNNVPAVKFTYKELPMELESYPGVEGVETNGFVSMVLFEPQMHARNVFKTINLLQNF 435
            P  ++LA K+S LKR++  APF  +F+ I +K A P+I  + YR +E+ Y+K +GD  T IF + FKD+DD V +K+FLQ F D R+++NNVP+V F+ K+ P+EL+   GV     +GFVS+ LF    H +   +T +L+Q F
Sbjct:   95 PNKEELAHKVSQLKRNLMAAPFLMVFDAIESKKATPEIISIDYRSDESFYIKTQGDNVTVIFDIIFKDSDDIVLSKIFLQAFVDVRKTLNNVPSVSFSQKDPPLELKGVRGVRAGVNHGFVSINLFPG--HIKKAQETADLIQTF 237          
BLAST of mRNA_M-pyrifera_M_contig110342.2162.1 vs. uniprot
Match: F4PTQ2_CAVFA (Arp2/3 complex 34 kDa subunit n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PTQ2_CAVFA)

HSP 1 Score: 128 bits (321), Expect = 1.580e-33
Identity = 61/142 (42.96%), Postives = 94/142 (66.20%), Query Frame = 1
Query:   10 DKLALKISNLKRHVGGAPFKKMFEQILAKNAAPDIWKVSYRENEAIYLKPEGDRCTAIFSVSFKDADDAVYAKVFLQEFADARRSMNNVPAVKFTYKELPMELESYPGVEGVETNGFVSMVLFEPQMHARNVFKTINLLQNF 435
            ++LA K++NLKR++  APF  +FE + AK   P+   + YR +E+ Y+KP+GD  T IF + FKDADD + +K+FLQ F D R++M +VP+V F+ K+ P+EL+   GV     +GFVS+ LF   +H +   +T +L+Q F
Sbjct:  100 EQLANKVANLKRNLMAAPFLMVFEAMEAKKPLPETITIDYRTDESFYIKPQGDNVTVIFDIHFKDADDVILSKIFLQAFVDVRKTMTSVPSVTFSQKDPPLELKGVKGVRAGVAHGFVSITLFP--LHLKRAQETADLIQTF 239          
BLAST of mRNA_M-pyrifera_M_contig110342.2162.1 vs. uniprot
Match: ARPC2_DICDI (Actin-related protein 2/3 complex subunit 2 n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=ARPC2_DICDI)

HSP 1 Score: 128 bits (321), Expect = 1.620e-33
Identity = 64/143 (44.76%), Postives = 95/143 (66.43%), Query Frame = 1
Query:   10 DKLALKISNLKRHVGGAPFKKMFEQILAKNAAPDIWKVSYRENEAIYLKPEGDRCTAIFSVSFKDADDAVYAKVFLQEFADARRSMNNVPAVKFTYKELPMELESYPGVEGVETN-GFVSMVLFEPQMHARNVFKTINLLQNF 435
            ++LA K+S LKRH+  APF  +FE I AK   P+I  ++YR +E  YLKP+GD    IF ++FKDADD + +K+FLQ F D R++++NVP++ F+ K+ P+EL+   GV   + N GFVS VLF    H +   ++ +L+Q F
Sbjct:  100 EELAKKVSLLKRHLVAAPFLMVFEGIEAKKPLPEIIAINYRTDETFYLKPQGDNVIVIFDIAFKDADDVILSKIFLQSFVDVRKTISNVPSITFSQKDPPLELKGVKGVRAGQANHGFVSFVLFPA--HIKKPQESADLIQTF 240          
BLAST of mRNA_M-pyrifera_M_contig110342.2162.1 vs. uniprot
Match: A0A2P6NTZ0_9EUKA (Arp2/3 complex 34 kDa subunit n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NTZ0_9EUKA)

HSP 1 Score: 127 bits (319), Expect = 1.380e-32
Identity = 65/154 (42.21%), Postives = 96/154 (62.34%), Query Frame = 1
Query:   10 DKLALKISNLKRHVGGAPFKKMFEQILAKNAAPDIWKVSYRENEAIYLKPEGDRCTAIFSVSFKDADDAVYAKVFLQEFADARRSMNNVPAVKFTYKELPMELESYPGVEGVETNGFVSM------------VLFEPQMHARNVFKTINLLQNF 435
            DK+   I+ LKRH   APF K+F  + AK     + +++YR++EAIY+KPE DR   IFS+ FKD DD ++AKVFLQE+ADAR++M+N P+V ++ KE P+EL+    ++  ++ G+VS             VLF P +      KTI+ +Q F
Sbjct:  149 DKVIHDIALLKRHAFAAPFYKVFADVEAKKGGGPLVEINYRDDEAIYIKPESDRAIVIFSIGFKDVDDIIFAKVFLQEYADARKTMSNAPSVTYSQKEPPLELKGVKNLKTGDSQGYVSFGELERGKALTDAVLFAPHVSGTKKEKTIDNIQTF 302          
BLAST of mRNA_M-pyrifera_M_contig110342.2162.1 vs. uniprot
Match: A0A7S2EXC4_9EUKA (Arp2/3 complex 34 kDa subunit (Fragment) n=1 Tax=Stereomyxa ramosa TaxID=1078864 RepID=A0A7S2EXC4_9EUKA)

HSP 1 Score: 114 bits (286), Expect = 6.420e-29
Identity = 65/140 (46.43%), Postives = 84/140 (60.00%), Query Frame = 1
Query:   16 LALKISNLKRHVGGAPFKKMFEQILAKNAAPDIWKVSYRENEAIYLKPEGDRCTAIFSVSFKDADDAVYAKVFLQEFADARRSMNNVPAVKFTYKELPMELESYPGVEGVETNGFVSMVLFEPQMHARNVFKTINLLQNF 435
            L  KI  LKR    A F KMF  + A   +P I  ++YR NEA+YL    +   AIFSV+FKD DD V +KVFLQEFA  R+S+NN P+VKF+ +E P+EL+    V   +  GFVS  LF   +   +  KTI+ LQ F
Sbjct:   88 LPRKIGLLKREAFAAAFVKMFGTVTAGGQSPMI-TINYRTNEALYLTQNREGVIAIFSVNFKDRDDVVISKVFLQEFAAGRKSINNAPSVKFSQREAPLELQGVQNVREADDQGFVSFALFSGHISEGHRDKTIDSLQMF 226          
BLAST of mRNA_M-pyrifera_M_contig110342.2162.1 vs. uniprot
Match: L8GWZ2_ACACA (Arp2/3 complex 34 kDa subunit n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GWZ2_ACACA)

HSP 1 Score: 115 bits (288), Expect = 1.280e-28
Identity = 63/142 (44.37%), Postives = 85/142 (59.86%), Query Frame = 1
Query:   10 DKLALKISNLKRHVGGAPFKKMFEQILAKNAAPDIWKVSYRENEAIYLKPEGDRCTAIFSVSFKDADDAVYAKVFLQEFADARRSMNNVPAVKFTYKELPMELESYPGVEGVETNGFVSMVLFEPQMHARNVFKTINLLQNF 435
            D L  KI+  KR V  AP + +F+    K   P +  ++YR NEA+YLK EG+    IFS++FKD DD V  KVFLQE   AR+++NN PAV F+ +E P+EL+S   V   E  GFV+ +LF P  H     KTI+ +  F
Sbjct:  102 DSLPGKIALFKRTVVAAPLEAVFD---GKPGLPPVITINYRTNEAVYLKREGNNVAVIFSINFKDKDDIVIGKVFLQELEAARKTINNAPAVTFSQRERPLELKSVQNVYEGEDQGFVTFLLFGPHTHESRRGKTIDTIHLF 240          
BLAST of mRNA_M-pyrifera_M_contig110342.2162.1 vs. uniprot
Match: A0A152A0Q5_9MYCE (Arp2/3 complex 34 kDa subunit n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A152A0Q5_9MYCE)

HSP 1 Score: 114 bits (286), Expect = 4.980e-28
Identity = 61/140 (43.57%), Postives = 83/140 (59.29%), Query Frame = 1
Query:   16 LALKISNLKRHVGGAPFKKMFEQILAKNAAPDIWKVSYRENEAIYLKPEGDRCTAIFSVSFKDADDAVYAKVFLQEFADARRSMNNVPAVKFTYKELPMELESYPGVEGVETNGFVSMVLFEPQMHARNVFKTINLLQNF 435
            LA  IS  KR++  APF   F  I AK    DI  V YR  E  Y+K +GD    +F + FKDADD + +K+FLQ F DAR+++NN PA+ F+ K+ P+EL+   GV     +GFVS VLF    H +   +T +L+Q F
Sbjct:  103 LATSISLFKRNLVSAPFLMAFSAIEAKKTI-DIISVDYRSEETFYIKTQGDNVIVVFDIHFKDADDIILSKIFLQSFVDARKTLNNTPAITFSQKDPPLELKGVRGVRTGAAHGFVSFVLFPA--HLKKPQETADLIQTF 239          
BLAST of mRNA_M-pyrifera_M_contig110342.2162.1 vs. uniprot
Match: L8HFV1_ACACA (Arp2/3 complex 34 kDa subunit n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HFV1_ACACA)

HSP 1 Score: 113 bits (283), Expect = 7.590e-28
Identity = 61/137 (44.53%), Postives = 83/137 (60.58%), Query Frame = 1
Query:   25 KISNLKRHVGGAPFKKMFEQILAKNAAPDIWKVSYRENEAIYLKPEGDRCTAIFSVSFKDADDAVYAKVFLQEFADARRSMNNVPAVKFTYKELPMELESYPGVEGVETNGFVSMVLFEPQMHARNVFKTINLLQNF 435
            K+S LKR++   PF  +     A+    ++  ++YR NEA+Y+KPE D  T IFS++FKD  D V  KVFLQEF D RRSM+  PAV FT +E P+EL    GV      GFVS VLF+  +      K+I+++Q F
Sbjct:  112 KVSLLKRNILAVPFLNV-----AEGKTKNLVVINYRSNEAMYIKPEADSVTVIFSINFKDQGDIVLGKVFLQEFQDCRRSMSGAPAVSFTQRERPLELRDVQGVYEGADQGFVSFVLFKNHLDPVRREKSIDMIQMF 243          
BLAST of mRNA_M-pyrifera_M_contig110342.2162.1 vs. uniprot
Match: A0A177UST4_9BASI (Arp2/3 complex 34 kDa subunit n=2 Tax=Tilletia TaxID=13289 RepID=A0A177UST4_9BASI)

HSP 1 Score: 102 bits (254), Expect = 1.790e-23
Identity = 62/161 (38.51%), Postives = 87/161 (54.04%), Query Frame = 1
Query:    1 PFSDKLALKISNLKRHVGGAPFKKMFE-------------QILAKNAAPDIWKVSYRENEAIYLKPEGDRCTAIFSVSFKDADDAVYAKVFLQEFADARRSMNNVPAVKFTYKELPMELESYPGVEGVETNGFVSMVLFEPQMHARN---VFKTINLLQNF 435
            P  D L   +S LKR+   APF++ F              Q    +A  +   + YRE+EAIY+ P GDR T +FS  FK+  D V+ +VFLQEF DARR   N P V ++ +E P+E+ S  G++  E  G+V+ VLF    H +N    F TI+ +Q F
Sbjct:  100 PERDTLIHSLSLLKRNAMAAPFERAFTIQKELEAEAEAAGQAPPSHATTEPMAIHYREDEAIYILPLGDRVTVVFSTEFKEETDKVFGRVFLQEFVDARRRHQNAPQVLYSNREPPLEIRSVQGLKSHEAVGYVTFVLFP--RHFQNPDHAFSTISRIQLF 258          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig110342.2162.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8J4Q0S1_9MYCE3.640e-3545.77Arp2/3 complex 34 kDa subunit n=1 Tax=Polysphondyl... [more]
D3BN12_POLPP1.520e-3343.45Arp2/3 complex 34 kDa subunit n=2 Tax=Acytosteliac... [more]
F4PTQ2_CAVFA1.580e-3342.96Arp2/3 complex 34 kDa subunit n=1 Tax=Cavenderia f... [more]
ARPC2_DICDI1.620e-3344.76Actin-related protein 2/3 complex subunit 2 n=1 Ta... [more]
A0A2P6NTZ0_9EUKA1.380e-3242.21Arp2/3 complex 34 kDa subunit n=1 Tax=Planoprotost... [more]
A0A7S2EXC4_9EUKA6.420e-2946.43Arp2/3 complex 34 kDa subunit (Fragment) n=1 Tax=S... [more]
L8GWZ2_ACACA1.280e-2844.37Arp2/3 complex 34 kDa subunit n=1 Tax=Acanthamoeba... [more]
A0A152A0Q5_9MYCE4.980e-2843.57Arp2/3 complex 34 kDa subunit n=1 Tax=Tieghemostel... [more]
L8HFV1_ACACA7.590e-2844.53Arp2/3 complex 34 kDa subunit n=1 Tax=Acanthamoeba... [more]
A0A177UST4_9BASI1.790e-2338.51Arp2/3 complex 34 kDa subunit n=2 Tax=Tilletia Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig110342contigM-pyrifera_M_contig110342:2..436 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score129.4
Seed ortholog evalue1.3e-27
Seed eggNOG ortholog44689.DDB0214935
Preferred nameARPC2
KEGG koko:K05758
KEGG Pathwayko04144,ko04666,ko04810,ko05100,ko05130,ko05131,ko05132,map04144,map04666,map04810,map05100,map05130,map05131,map05132
Hectar predicted targeting categoryother localisation
GOsGO:0000001,GO:0000147,GO:0000226,GO:0000302,GO:0000902,GO:0000904,GO:0001667,GO:0001726,GO:0002009,GO:0002102,GO:0002252,GO:0002253,GO:0002376,GO:0002429,GO:0002431,GO:0002433,GO:0002682,GO:0002684,GO:0002757,GO:0002764,GO:0002768,GO:0003674,GO:0003779,GO:0005102,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005829,GO:0005856,GO:0005884,GO:0005885,GO:0005886,GO:0005912,GO:0005924,GO:0005925,GO:0005938,GO:0006810,GO:0006887,GO:0006897,GO:0006898,GO:0006909,GO:0006928,GO:0006950,GO:0006979,GO:0006996,GO:0007005,GO:0007010,GO:0007015,GO:0007017,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007275,GO:0008064,GO:0008092,GO:0008150,GO:0008154,GO:0008360,GO:0009636,GO:0009653,GO:0009719,GO:0009790,GO:0009888,GO:0009986,GO:0009987,GO:0010026,GO:0010033,GO:0010035,GO:0010090,GO:0010243,GO:0010591,GO:0010592,GO:0010631,GO:0010638,GO:0010720,GO:0010769,GO:0010770,GO:0010810,GO:0010811,GO:0012505,GO:0012506,GO:0014070,GO:0014910,GO:0014911,GO:0015629,GO:0016020,GO:0016043,GO:0016192,GO:0016331,GO:0016477,GO:0019894,GO:0019899,GO:0022411,GO:0022603,GO:0022604,GO:0022607,GO:0023052,GO:0030027,GO:0030029,GO:0030030,GO:0030031,GO:0030036,GO:0030041,GO:0030042,GO:0030054,GO:0030055,GO:0030139,GO:0030141,GO:0030154,GO:0030155,GO:0030175,GO:0030334,GO:0030335,GO:0030424,GO:0030425,GO:0030426,GO:0030427,GO:0030479,GO:0030659,GO:0030666,GO:0030670,GO:0030832,GO:0030833,GO:0030834,GO:0030838,GO:0030863,GO:0030864,GO:0030865,GO:0030866,GO:0031090,GO:0031143,GO:0031252,GO:0031253,GO:0031256,GO:0031334,GO:0031344,GO:0031346,GO:0031410,GO:0031941,GO:0031982,GO:0032271,GO:0032273,GO:0032386,GO:0032388,GO:0032501,GO:0032502,GO:0032535,GO:0032587,GO:0032879,GO:0032880,GO:0032940,GO:0032956,GO:0032970,GO:0032984,GO:0032989,GO:0032991,GO:0033043,GO:0033157,GO:0033267,GO:0033554,GO:0034021,GO:0034314,GO:0034599,GO:0034614,GO:0034622,GO:0035254,GO:0035556,GO:0035650,GO:0035690,GO:0036119,GO:0036120,GO:0036194,GO:0036195,GO:0036477,GO:0038093,GO:0038094,GO:0038096,GO:0040011,GO:0040012,GO:0040017,GO:0042221,GO:0042493,GO:0042542,GO:0042995,GO:0043005,GO:0043025,GO:0043197,GO:0043198,GO:0043204,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043232,GO:0043244,GO:0043254,GO:0043624,GO:0043679,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044297,GO:0044306,GO:0044309,GO:0044396,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044433,GO:0044444,GO:0044446,GO:0044448,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0044877,GO:0045010,GO:0045202,GO:0045335,GO:0045472,GO:0045595,GO:0045597,GO:0045785,GO:0046677,GO:0046903,GO:0048013,GO:0048308,GO:0048311,GO:0048468,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0048598,GO:0048729,GO:0048856,GO:0048869,GO:0048870,GO:0050776,GO:0050778,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051015,GO:0051049,GO:0051050,GO:0051094,GO:0051117,GO:0051128,GO:0051130,GO:0051179,GO:0051222,GO:0051223,GO:0051234,GO:0051258,GO:0051261,GO:0051270,GO:0051272,GO:0051489,GO:0051491,GO:0051493,GO:0051495,GO:0051640,GO:0051641,GO:0051646,GO:0051674,GO:0051716,GO:0060284,GO:0060341,GO:0060429,GO:0060491,GO:0061024,GO:0061645,GO:0061825,GO:0061826,GO:0061827,GO:0061830,GO:0061834,GO:0061835,GO:0065003,GO:0065007,GO:0065008,GO:0070161,GO:0070201,GO:0070301,GO:0070358,GO:0070528,GO:0070848,GO:0070849,GO:0070887,GO:0071236,GO:0071310,GO:0071362,GO:0071363,GO:0071364,GO:0071407,GO:0071417,GO:0071437,GO:0071495,GO:0071801,GO:0071803,GO:0071840,GO:0071933,GO:0071944,GO:0072752,GO:0090066,GO:0090087,GO:0090130,GO:0090132,GO:0090313,GO:0090314,GO:0090316,GO:0090558,GO:0090626,GO:0090723,GO:0090725,GO:0097223,GO:0097237,GO:0097305,GO:0097306,GO:0097327,GO:0097435,GO:0097440,GO:0097447,GO:0097458,GO:0097708,GO:0098588,GO:0098590,GO:0098657,GO:0098793,GO:0098794,GO:0098805,GO:0098858,GO:0099080,GO:0099081,GO:0099503,GO:0099512,GO:0099513,GO:0099568,GO:0110053,GO:0120025,GO:0120032,GO:0120034,GO:0120035,GO:0120038,GO:0150034,GO:1900024,GO:1900026,GO:1901355,GO:1901654,GO:1901655,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901879,GO:1902115,GO:1902117,GO:1902743,GO:1902745,GO:1902903,GO:1902905,GO:1903533,GO:1903827,GO:1903829,GO:1904951,GO:1905475,GO:1905477,GO:1905924,GO:1905926,GO:1990089,GO:1990090,GO:2000145,GO:2000147,GO:2000249,GO:2000251,GO:2000812,GO:2000814
EggNOG free text desc.component of the Arp2 3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks
EggNOG OGs3X8N1@554915,COG4690@1,KOG2826@2759
Ec32 ortholog descriptionActin-related protein 2/3 complex subunit 2
Ec32 orthologEc-09_003720.1
COG Functional cat.Z
Best tax levelAmoebozoa
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131,ko04812
Exons1
Model size435
Cds size435
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815614.4478018-CDS-M-pyrifera_M_contig110342:1..4361622815614.4478018-CDS-M-pyrifera_M_contig110342:1..436Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig110342 2..436 -
1692277488.1587112-CDS-M-pyrifera_M_contig110342:1..4361692277488.1587112-CDS-M-pyrifera_M_contig110342:1..436Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig110342 2..436 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig110342.2162.1prot_M-pyrifera_M_contig110342.2162.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig110342 2..436 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig110342.2162.1

>prot_M-pyrifera_M_contig110342.2162.1 ID=prot_M-pyrifera_M_contig110342.2162.1|Name=mRNA_M-pyrifera_M_contig110342.2162.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=145bp
PFSDKLALKISNLKRHVGGAPFKKMFEQILAKNAAPDIWKVSYRENEAIY
LKPEGDRCTAIFSVSFKDADDAVYAKVFLQEFADARRSMNNVPAVKFTYK
ELPMELESYPGVEGVETNGFVSMVLFEPQMHARNVFKTINLLQNF
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mRNA from alignment at M-pyrifera_M_contig110342:2..436-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig110342.2162.1 ID=mRNA_M-pyrifera_M_contig110342.2162.1|Name=mRNA_M-pyrifera_M_contig110342.2162.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=435bp|location=Sequence derived from alignment at M-pyrifera_M_contig110342:2..436- (Macrocystis pyrifera P11B4 male)
CCGTTCTCAGACAAGCTTGCCCTGAAGATCAGCAACCTGAAGCGCCACGT TGGCGGCGCTCCCTTCAAGAAGATGTTCGAGCAGATCCTCGCCAAGAACG CTGCCCCCGATATCTGGAAGGTGTCTTACCGCGAGAACGAGGCCATCTAC CTCAAGCCCGAGGGTGACCGCTGCACCGCCATCTTCTCTGTGTCCTTCAA GGACGCCGACGATGCTGTGTACGCCAAGGTGTTCCTCCAGGAGTTCGCCG ACGCCCGCCGCTCGATGAACAACGTGCCTGCTGTGAAGTTCACTTACAAG GAGCTCCCTATGGAGTTGGAGTCCTACCCTGGAGTCGAGGGTGTCGAGAC CAACGGTTTCGTGTCCATGGTGCTTTTCGAGCCCCAGATGCACGCCCGCA ACGTGTTCAAGACCATCAACCTCCTTCAGAACTTC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig110342:2..436-

>mRNA_M-pyrifera_M_contig110342.2162.1 ID=mRNA_M-pyrifera_M_contig110342.2162.1|Name=mRNA_M-pyrifera_M_contig110342.2162.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=870bp|location=Sequence derived from alignment at M-pyrifera_M_contig110342:2..436- (Macrocystis pyrifera P11B4 male)
CCGTTCTCAGACAAGCTTGCCCTGAAGATCAGCAACCTGAAGCGCCACGT
TGGCGGCGCTCCCTTCAAGAAGATGTTCGAGCAGATCCTCGCCAAGAACG
CTGCCCCCGATATCTGGAAGGTGTCTTACCGCGAGAACGAGGCCATCTAC
CTCAAGCCCGAGGGTGACCGCTGCACCGCCATCTTCTCTGTGTCCTTCAA
GGACGCCGACGATGCTGTGTACGCCAAGGTGTTCCTCCAGGAGTTCGCCG
ACGCCCGCCGCTCGATGAACAACGTGCCTGCTGTGAAGTTCACTTACAAG
GAGCTCCCTATGGAGTTGGAGTCCTACCCTGGAGTCGAGGGTGTCGAGAC
CAACGGTTTCGTGTCCATGGTGCTTTTCGAGCCCCAGATGCACGCCCGCA
ACGTGTTCAAGACCATCAACCTCCTTCAGAACTTCCCGTTCTCAGACAAG
CTTGCCCTGAAGATCAGCAACCTGAAGCGCCACGTTGGCGGCGCTCCCTT
CAAGAAGATGTTCGAGCAGATCCTCGCCAAGAACGCTGCCCCCGATATCT
GGAAGGTGTCTTACCGCGAGAACGAGGCCATCTACCTCAAGCCCGAGGGT
GACCGCTGCACCGCCATCTTCTCTGTGTCCTTCAAGGACGCCGACGATGC
TGTGTACGCCAAGGTGTTCCTCCAGGAGTTCGCCGACGCCCGCCGCTCGA
TGAACAACGTGCCTGCTGTGAAGTTCACTTACAAGGAGCTCCCTATGGAG
TTGGAGTCCTACCCTGGAGTCGAGGGTGTCGAGACCAACGGTTTCGTGTC
CATGGTGCTTTTCGAGCCCCAGATGCACGCCCGCAACGTGTTCAAGACCA
TCAACCTCCTTCAGAACTTC
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