mRNA_M-pyrifera_M_contig110336.2160.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig110336.2160.1 vs. uniprot
Match: A0A2P6NAJ7_9EUKA (V-type proton ATPase subunit n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NAJ7_9EUKA) HSP 1 Score: 121 bits (304), Expect = 3.560e-31 Identity = 50/93 (53.76%), Postives = 74/93 (79.57%), Query Frame = 1
Query: 25 YGINDGFLDGMIRGFKAGILGGSDYANLQQCDTLEDIKLHLSSTAYGDFLADEQGPPHTTTLQERCRDKLVQEIKYIRSQAMQPFAKFVDYIT 303
+ INDG+++ ++RGF++GIL DY NL QC+TLED+K+HL +T YGDFL+ E P HTTT+ ERC DK+V+E ++RSQ+++P + F+DYI+
Sbjct: 14 FNINDGYVEALVRGFRSGILSTGDYNNLTQCETLEDMKMHLGTTDYGDFLSQESSPIHTTTIAERCTDKMVKEFNHLRSQSVEPLSTFLDYIS 106
BLAST of mRNA_M-pyrifera_M_contig110336.2160.1 vs. uniprot
Match: A0A7S2T5N6_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A7S2T5N6_9CHLO) HSP 1 Score: 120 bits (302), Expect = 4.550e-31 Identity = 53/97 (54.64%), Postives = 76/97 (78.35%), Query Frame = 1
Query: 13 GLTTYGINDGFLDGMIRGFKAGILGGSDYANLQQCDTLEDIKLHLSSTAYGDFLADEQGPPHTTTLQERCRDKLVQEIKYIRSQAMQPFAKFVDYIT 303
G+ T+ I+DG+LDG++RGF+AG+L +DYANL QC+ LED+KLHL+ T+YGDFLADE G T T+ E+C KLV+E K++R ++ P + F++YIT
Sbjct: 11 GMMTFNIDDGYLDGILRGFRAGLLTNADYANLTQCENLEDMKLHLAGTSYGDFLADETGQLLTATIAEKCTQKLVKEFKHMRVNSVAPLSTFLEYIT 107
BLAST of mRNA_M-pyrifera_M_contig110336.2160.1 vs. uniprot
Match: D3B606_POLPP (V-type proton ATPase subunit n=2 Tax=Acytosteliaceae TaxID=2058183 RepID=D3B606_POLPP) HSP 1 Score: 121 bits (303), Expect = 4.570e-31 Identity = 55/89 (61.80%), Postives = 70/89 (78.65%), Query Frame = 1
Query: 34 NDGFLDGMIRGFKAGILGGSDYANLQQCDTLEDIKLHLSSTAYGDFLADEQGPPHTTTLQERCRDKLVQEIKYIRSQAMQPFAKFVDYI 300
NDG+L+G++RGF+ GIL +DYANL+QCD LED+KLHLS T YGDFLA E P HTTT+ E+ KLV E +IR+QA++P A F+DYI
Sbjct: 11 NDGYLEGLLRGFRKGILTAADYANLRQCDNLEDMKLHLSQTDYGDFLAGEPSPLHTTTIAEKATQKLVNEFMHIRNQAVEPLATFMDYI 99
BLAST of mRNA_M-pyrifera_M_contig110336.2160.1 vs. uniprot
Match: A0A388JU67_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388JU67_CHABU) HSP 1 Score: 122 bits (306), Expect = 5.770e-31 Identity = 54/94 (57.45%), Postives = 74/94 (78.72%), Query Frame = 1
Query: 22 TYGINDGFLDGMIRGFKAGILGGSDYANLQQCDTLEDIKLHLSSTAYGDFLADEQGPPHTTTLQERCRDKLVQEIKYIRSQAMQPFAKFVDYIT 303
T+ INDGFL+ ++RG+++G+L G+DY NL QC+TL+DIKLHLS T YG+FL +E P TTT+ E+C +KLV + KY+R QAM P + F+DYIT
Sbjct: 8 TFNINDGFLEAVVRGYRSGLLTGADYHNLCQCETLDDIKLHLSGTDYGNFLENEPSPLRTTTIVEKCTEKLVSQYKYLRCQAMYPLSTFLDYIT 101
BLAST of mRNA_M-pyrifera_M_contig110336.2160.1 vs. uniprot
Match: A0A7S0DV04_9EUKA (V-type proton ATPase subunit n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0DV04_9EUKA) HSP 1 Score: 119 bits (298), Expect = 2.700e-30 Identity = 51/91 (56.04%), Postives = 75/91 (82.42%), Query Frame = 1
Query: 31 INDGFLDGMIRGFKAGILGGSDYANLQQCDTLEDIKLHLSSTAYGDFLADEQGPPHTTTLQERCRDKLVQEIKYIRSQAMQPFAKFVDYIT 303
INDG+L+G++RG+++GIL +DYANL QC+T++D+K+HLSST YG+FL +E P TTTL E+C DKLV+E +++ QA++P A F++YIT
Sbjct: 16 INDGYLEGLLRGYRSGILTSTDYANLCQCETIDDMKMHLSSTDYGNFLQNEPSPISTTTLAEKCTDKLVEEFNFLKVQAVEPMATFMEYIT 106
BLAST of mRNA_M-pyrifera_M_contig110336.2160.1 vs. uniprot
Match: L8H122_ACACA (Vacuolar proton pump d subunit, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H122_ACACA) HSP 1 Score: 118 bits (295), Expect = 2.930e-30 Identity = 49/96 (51.04%), Postives = 75/96 (78.12%), Query Frame = 1
Query: 16 LTTYGINDGFLDGMIRGFKAGILGGSDYANLQQCDTLEDIKLHLSSTAYGDFLADEQGPPHTTTLQERCRDKLVQEIKYIRSQAMQPFAKFVDYIT 303
+ T+ I+DGF + ++RG+++GIL +DYANL QC++LED+KLHL+ST YGDFL +E P HTTT+ E+C KL++E +Y+R+ +P + F+DYI+
Sbjct: 20 IMTFNIDDGFPEAIVRGYRSGILTPADYANLTQCESLEDMKLHLASTDYGDFLQNEPSPIHTTTIAEKCTQKLIEEFQYVRANCFEPLSTFLDYIS 115
BLAST of mRNA_M-pyrifera_M_contig110336.2160.1 vs. uniprot
Match: A0A7S4IPZ6_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4IPZ6_9EUKA) HSP 1 Score: 112 bits (281), Expect = 3.400e-30 Identity = 48/91 (52.75%), Postives = 72/91 (79.12%), Query Frame = 1
Query: 31 INDGFLDGMIRGFKAGILGGSDYANLQQCDTLEDIKLHLSSTAYGDFLADEQGPPHTTTLQERCRDKLVQEIKYIRSQAMQPFAKFVDYIT 303
I+DG+L+ ++RGF+ GIL +DYANL QC++++D+K+HL+ T YG+FL +E P TTTL E+C +KLV+E ++R QA++P A F+DYIT
Sbjct: 6 IDDGYLEAILRGFRGGILTSTDYANLCQCESIDDMKMHLAGTEYGNFLQNEASPISTTTLAEKCTEKLVEEFNFLRVQAVEPLATFMDYIT 96
BLAST of mRNA_M-pyrifera_M_contig110336.2160.1 vs. uniprot
Match: A0A6S7JU92_PARCT (V-type proton ATPase subunit d 1 (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JU92_PARCT) HSP 1 Score: 112 bits (279), Expect = 4.050e-30 Identity = 46/93 (49.46%), Postives = 73/93 (78.49%), Query Frame = 1
Query: 25 YGINDGFLDGMIRGFKAGILGGSDYANLQQCDTLEDIKLHLSSTAYGDFLADEQGPPHTTTLQERCRDKLVQEIKYIRSQAMQPFAKFVDYIT 303
+ ++ G+L+G++RGF++GIL +DY NL+QC+TLED+KLHL ST YG FL +E GP + + +R R+K+V E +++R+QA++P A F+DY+T
Sbjct: 7 FNVDGGYLEGLVRGFRSGILRRTDYHNLEQCETLEDLKLHLQSTDYGSFLQNEAGPLSVSVIDDRLREKMVTEFRHLRNQAVEPLATFMDYVT 99
BLAST of mRNA_M-pyrifera_M_contig110336.2160.1 vs. uniprot
Match: A0A7S3RNK6_EMIHU (V-type proton ATPase subunit n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3RNK6_EMIHU) HSP 1 Score: 117 bits (294), Expect = 1.350e-29 Identity = 51/96 (53.12%), Postives = 76/96 (79.17%), Query Frame = 1
Query: 16 LTTYGINDGFLDGMIRGFKAGILGGSDYANLQQCDTLEDIKLHLSSTAYGDFLADEQGPPHTTTLQERCRDKLVQEIKYIRSQAMQPFAKFVDYIT 303
+ TY I+ G+L+G++RG++AGIL +DYANL QC+T++D+K+HLSST YG+FL +E P TTTL ++ +KLV+E ++R QA++P A F+DYIT
Sbjct: 30 MMTYNIDVGYLEGLLRGYRAGILNSTDYANLTQCETIDDMKMHLSSTDYGNFLQNEPSPISTTTLAQKTTEKLVEEFNFLRMQAVEPLATFLDYIT 125
BLAST of mRNA_M-pyrifera_M_contig110336.2160.1 vs. uniprot
Match: F4PQK3_CAVFA (V-type proton ATPase subunit n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PQK3_CAVFA) HSP 1 Score: 117 bits (292), Expect = 2.080e-29 Identity = 52/98 (53.06%), Postives = 73/98 (74.49%), Query Frame = 1
Query: 10 GGLTTYGINDGFLDGMIRGFKAGILGGSDYANLQQCDTLEDIKLHLSSTAYGDFLADEQGPPHTTTLQERCRDKLVQEIKYIRSQAMQPFAKFVDYIT 303
G + T+ +DG+L+ ++RGF+ GIL +DY NL+QCD+LED+KLHLS T YGDFLA E P HTTT+ E+ KLV E IR+Q+++P + F+DYI+
Sbjct: 10 GSIFTFNKDDGYLEALLRGFRKGILSAADYTNLRQCDSLEDMKLHLSQTDYGDFLAGEPSPIHTTTMAEKATQKLVDEFMQIRNQSVEPLSTFLDYIS 107 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig110336.2160.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig110336.2160.1 >prot_M-pyrifera_M_contig110336.2160.1 ID=prot_M-pyrifera_M_contig110336.2160.1|Name=mRNA_M-pyrifera_M_contig110336.2160.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=102bp MSVGGLTTYGINDGFLDGMIRGFKAGILGGSDYANLQQCDTLEDIKLHLSback to top mRNA from alignment at M-pyrifera_M_contig110336:68..424- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig110336.2160.1 ID=mRNA_M-pyrifera_M_contig110336.2160.1|Name=mRNA_M-pyrifera_M_contig110336.2160.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=357bp|location=Sequence derived from alignment at M-pyrifera_M_contig110336:68..424- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig110336:68..424- >mRNA_M-pyrifera_M_contig110336.2160.1 ID=mRNA_M-pyrifera_M_contig110336.2160.1|Name=mRNA_M-pyrifera_M_contig110336.2160.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=612bp|location=Sequence derived from alignment at M-pyrifera_M_contig110336:68..424- (Macrocystis pyrifera P11B4 male)back to top |