mRNA_M-pyrifera_M_contig11029.2156.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig11029.2156.1 vs. uniprot
Match: D8LFI3_ECTSI (CobW C-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFI3_ECTSI) HSP 1 Score: 206 bits (523), Expect = 3.170e-59 Identity = 95/130 (73.08%), Postives = 108/130 (83.08%), Query Frame = 2
Query: 5 AVRSALGKLLRSKGFMWLAFSDKAAMYWSHAGSSFEVFCLGRWWDSLGRAQWPPGQEAAIAEDFEGVYGDRRQELVFIGLGMSEEAPRSSITAALDACLLTDEEMDVYDEMRESAENLPEVFPSSLRIRF 394
A+R AL K++RSKGFMWLAFSDKAAMYWSHAG+SFEV CLGRWWDSL R WPPG A+ EDFEG YGDRRQELVFIG+GM EE+ R I ALD CLLTDEEM+VY+ +RE+A+ LPE FPS LR+RF
Sbjct: 468 ALRMALRKVVRSKGFMWLAFSDKAAMYWSHAGASFEVLCLGRWWDSLERELWPPGSAEAVMEDFEGKYGDRRQELVFIGMGMCEESTRGPIVKALDGCLLTDEEMEVYESVRETADELPEAFPSPLRVRF 597
BLAST of mRNA_M-pyrifera_M_contig11029.2156.1 vs. uniprot
Match: A0A836CKL1_9STRA (CobW/HypB/UreG, nucleotide-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKL1_9STRA) HSP 1 Score: 164 bits (415), Expect = 3.380e-43 Identity = 79/131 (60.31%), Postives = 96/131 (73.28%), Query Frame = 2
Query: 2 AAVRSALGKLLRSKGFMWLAFSDKAAMYWSHAGSSFEVFCLGRWWDSLGRAQWPPGQEAAIAEDFEGVYGDRRQELVFIGLGMSEEAPRSSITAALDACLLTDEEMDVYDEMRESAENLPEVFPSSLRIRF 394
A R AL +L+RSKGF+WLA SD AAMYWSHAG FE+ CLGRWW S+ R WP GQEAAI EDFE +GDRRQELVFIGL ++ + +S I +ALD CLLTDEE VY+ R+ + L E FP+ + IR+
Sbjct: 561 AVARQALRRLVRSKGFLWLACSDVAAMYWSHAGRHFEMQCLGRWWASVPRPAWPQGQEAAITEDFEEPHGDRRQELVFIGLDVANQKVQSIIASALDECLLTDEEWAVYEASRKDQKKLDEAFPNFIAIRY 691
BLAST of mRNA_M-pyrifera_M_contig11029.2156.1 vs. uniprot
Match: A0A7S1ZNR7_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZNR7_TRICV) HSP 1 Score: 126 bits (317), Expect = 6.060e-33 Identity = 64/120 (53.33%), Postives = 79/120 (65.83%), Query Frame = 2
Query: 11 RSALGKLLRSKGFMWLAFSDKAAMYWSHAGSSFEVFCLGRWWDSLGRAQWPPGQEAAIAEDFEG--------------VYGDRRQELVFIGLGMSEEAPRSSITAALDACLLTDEEMDVY 328
R AL + LRSKGF WLA SD+AA+YWSHAG SFE+ CLGRWW +L R QWPP I +F+ GDRRQE+VFIG +S++ RS++T ALD+CLLT EE +VY
Sbjct: 48 RRALSRCLRSKGFAWLANSDEAALYWSHAGRSFEMQCLGRWWATLPRDQWPPEAAETILAEFDDPNHVEDPTYPRDPVTVGDRRQEIVFIGPTLSDDDARSAVTEALDSCLLTREEWEVY 167
BLAST of mRNA_M-pyrifera_M_contig11029.2156.1 vs. uniprot
Match: A0A8J2SRV0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SRV0_9STRA) HSP 1 Score: 129 bits (323), Expect = 1.230e-30 Identity = 66/125 (52.80%), Postives = 85/125 (68.00%), Query Frame = 2
Query: 17 ALGKLLRSKGFMWLAFSDKAAMYWSHAGSSFEVFCLGRWWDSLGRAQWPPGQEAAIAEDFEGVYGDRRQELVFIGLGMSEEAPRSSITAALDACLLTDEEMDVYDEMRESAENLPEVFPSSLRIR 391
AL ++RSKGF+WLA S AA YWSHAG+ F +GRWW +L ++P A+I DF+G GDRRQE+VFIG+G A +++IT ALDACLLTD+EM Y + A PE+FPS LR+R
Sbjct: 501 ALATIVRSKGFLWLASSHDAAYYWSHAGNHFAAELMGRWWATLPEDRYPEDMRASILSDFDGEDGDRRQEIVFIGVGAV--AQQAAITEALDACLLTDDEMAAYRAADDDAR--PELFPSDLRVR 621
BLAST of mRNA_M-pyrifera_M_contig11029.2156.1 vs. uniprot
Match: K0RTA9_THAOC (CobW C-terminal domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RTA9_THAOC) HSP 1 Score: 126 bits (316), Expect = 2.300e-30 Identity = 64/131 (48.85%), Postives = 81/131 (61.83%), Query Frame = 2
Query: 29 LLRSKGFMWLAFSDKAAMYWSHAGSSFEVFCLGRWWDSLGRAQWPPGQEAAIAEDFEGV---------YGDRRQELVFIGLGMSEEAPRSSITAALDACLLTDEEMDVYDEMRESAENLPEVFPSSLRIRF 394
+LRSKGF W A S+ A+YWSHAGSSFE+ CLGRWW +L R+QWP I DF+ V GDRRQE+VFIG G+ + S+IT LD+CLLTDEE + + R+ L F S++ IR
Sbjct: 302 ILRSKGFAWTADSNIKALYWSHAGSSFEMQCLGRWWATLHRSQWPEENTEGILSDFDSVDHNESKGDTVGDRRQEIVFIGPGLGAKTSESAITEMLDSCLLTDEEWETFRLNRDDESYLISCFESTIDIRM 432
BLAST of mRNA_M-pyrifera_M_contig11029.2156.1 vs. uniprot
Match: A0A0G4HWR3_9ALVE (CobW C-terminal domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HWR3_9ALVE) HSP 1 Score: 119 bits (298), Expect = 7.860e-30 Identity = 58/112 (51.79%), Postives = 73/112 (65.18%), Query Frame = 2
Query: 8 VRSALGKLLRSKGFMWLAFSDKAAMYWSHAGSSFEVFCLGRWWDSLGRAQWPPGQEAAIAEDFEGVYGDRRQELVFIGLGMSEEAPRSSITAALDACLLTDEEMDVYDEMRE 343
VR AL ++RSKGF+WLA SD WSHAG +FE+ LG WWD R WP E I DFEG +GDRRQ+LVFIG +++ R+ + ALDA LLTD E++ Y + RE
Sbjct: 42 VREALSGVVRSKGFIWLASSDTLCYQWSHAGRTFEMQLLGLWWDVRDREDWPEEFEEQILRDFEGEFGDRRQQLVFIGTSVADPKLRNELEDALDAALLTDAELEAYTQERE 153
BLAST of mRNA_M-pyrifera_M_contig11029.2156.1 vs. uniprot
Match: A0A7S2Y1P1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1P1_9STRA) HSP 1 Score: 124 bits (312), Expect = 1.810e-29 Identity = 66/141 (46.81%), Postives = 87/141 (61.70%), Query Frame = 2
Query: 5 AVRSALGKLLRSKGFMWLAFSDKAAMYWSHAGSSFEVFCLGRWWDSLGRAQWPPGQEAAIAEDFEGVYGDRRQELVFIGL---------GMSEEA--PRSSITAALDACLLTDEEMDVYDEMRESAENLPEVFPSSLRIRF 394
++++ALG ++RSKGF WLA D AAMYWSHAGS FE+ C G+WW + R WPP I +DFEG GDRRQE+VFIG+ G E+ P+ I ALD+CL TDEEM+V + E F +++IR+
Sbjct: 363 SLQAALGCIVRSKGFSWLANMDVAAMYWSHAGSQFEMQCQGQWWAGVPREMWPPENIEVILQDFEGDGGDRRQEIVFIGMLGANIAVEDGEPSESKTPQEIIEDALDSCLATDEEMEVLKT--QGIREATEAFRGNMKIRY 501
BLAST of mRNA_M-pyrifera_M_contig11029.2156.1 vs. uniprot
Match: A0A6S8CKI4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A6S8CKI4_9STRA) HSP 1 Score: 124 bits (310), Expect = 7.410e-29 Identity = 67/124 (54.03%), Postives = 80/124 (64.52%), Query Frame = 2
Query: 5 AVRSALGKLLRSKGFMWLAFSDKAAMYWSHAGSSFEVFCLGRWWDSLGRAQWPPGQEAAIAEDFEGVYGDRRQELVFIGLGMSEEAPRSSITAALDACLLTDEEMDVYDEMRESAENLPEVFPS 376
A+ SA L+RSKGFMWLA S AA YWSHAG F+ LGRWW +L R WP Q AI DF+G +GDRRQE+VFIG M + + I ALDACLLTD+E VY E+ +S + FPS
Sbjct: 493 ALTSAFKLLVRSKGFMWLASSHDAAFYWSHAGKFFDAPILGRWWATLPREYWPADQVEAIEADFDGQFGDRRQEIVFIG--MDALSNQKLIEDALDACLLTDDEFSVYTEL-DSEDARKARFPS 613
BLAST of mRNA_M-pyrifera_M_contig11029.2156.1 vs. uniprot
Match: B7FPZ0_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FPZ0_PHATC) HSP 1 Score: 117 bits (292), Expect = 2.800e-26 Identity = 59/139 (42.45%), Postives = 83/139 (59.71%), Query Frame = 2
Query: 2 AAVRSALGKLLRSKGFMWLAFSDKAAMYWSHAGSSFEVFCLGRWWDSLGRAQWPPGQEAAIAEDFE-----------GVYGDRRQELVFIGLGMSEEAPRSSITAALDACLLTDEEMDVYDEMRESAENLPEVFPSSLR 385
A +SA+ K+LRSKGF+W A S + A YWSHAG SFE+ LG+WW +L R QWP AI D++ G GDRRQE+V IG GM + +++ LD CLL D+E+D ++E + L + FP+ ++
Sbjct: 1199 ATAKSAMKKILRSKGFVWCADSFEVARYWSHAGISFELTNLGKWWATLPREQWPQEAIRAILADYDDANHDDQSASTGTVGDRRQEVVLIGPGMGGPTAQKEVSSILDKCLLRDDELDFFNEKKLDEGALQKAFPNPIQ 1337
BLAST of mRNA_M-pyrifera_M_contig11029.2156.1 vs. uniprot
Match: F0YA64_AURAN (CobW C-terminal domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YA64_AURAN) HSP 1 Score: 115 bits (287), Expect = 3.730e-26 Identity = 63/128 (49.22%), Postives = 82/128 (64.06%), Query Frame = 2
Query: 14 SALGKLLRSKGFMWLAFSDKAAMYWSHAGSSFEVFCLGRWWDSLGRAQWPPGQEAAIAEDFEGVY--GDRRQELVFIGLGMSEEAPRSSITAALDACLLTDEEMDVYDEMRESAENLPEVFPSSLRIR 391
+AL L+RSKGF+WLA S AA YWSHAG+ F LGRWW +L WP + +I DF+G GDRRQE+VFIG + A + +I AALD CLLTD+E+ Y ++A L +FPS L+I+
Sbjct: 331 AALATLVRSKGFLWLASSHDAAYYWSHAGAFFNAELLGRWWATLPEEHWPEDLKPSILADFDGDSPDGDRRQEIVFIGADLL--AKQGTIEAALDGCLLTDDELAAYRGADDAA--LEALFPSDLKIK 454 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11029.2156.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig11029.2156.1 >prot_M-pyrifera_M_contig11029.2156.1 ID=prot_M-pyrifera_M_contig11029.2156.1|Name=mRNA_M-pyrifera_M_contig11029.2156.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=117bp MWLAFSDKAAMYWSHAGSSFEVFCLGRWWDSLGRAQWPPGQEAAIAEDFEback to top mRNA from alignment at M-pyrifera_M_contig11029:1824..6613- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig11029.2156.1 ID=mRNA_M-pyrifera_M_contig11029.2156.1|Name=mRNA_M-pyrifera_M_contig11029.2156.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4790bp|location=Sequence derived from alignment at M-pyrifera_M_contig11029:1824..6613- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig11029:1824..6613- >mRNA_M-pyrifera_M_contig11029.2156.1 ID=mRNA_M-pyrifera_M_contig11029.2156.1|Name=mRNA_M-pyrifera_M_contig11029.2156.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=702bp|location=Sequence derived from alignment at M-pyrifera_M_contig11029:1824..6613- (Macrocystis pyrifera P11B4 male)back to top |