mRNA_M-pyrifera_M_contig110265.2155.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig110265.2155.1 vs. uniprot
Match: A0A5N5SRU5_9CRUS (2',3'-cyclic-nucleotide 3'-phosphodiesterase (Fragment) n=1 Tax=Armadillidium nasatum TaxID=96803 RepID=A0A5N5SRU5_9CRUS) HSP 1 Score: 62.8 bits (151), Expect = 1.800e-9 Identity = 34/83 (40.96%), Postives = 52/83 (62.65%), Query Frame = 1
Query: 43 VLVVMRGVPGSGKSTLTRKIQRRMSRRGRHVDVRVASADTHFEKGPHGALYVFDFRSLHRAHQLCQETVQQAMMEEVPLVVLD 291
++V++RG+PGSGKST+++ IQR+ H+ RV SAD F K YV+D + AH CQE +A+ E++ +VV+D
Sbjct: 113 IMVILRGLPGSGKSTISKHIQRK------HISCRVCSADNFFMKDGE---YVYDRSLIKEAHAQCQENAIKAVEEQISVVVID 186
BLAST of mRNA_M-pyrifera_M_contig110265.2155.1 vs. uniprot
Match: A0A444TJ76_ARMVU (2',3'-cyclic-nucleotide 3'-phosphodiesterase n=1 Tax=Armadillidium vulgare TaxID=13347 RepID=A0A444TJ76_ARMVU) HSP 1 Score: 60.8 bits (146), Expect = 1.020e-8 Identity = 32/83 (38.55%), Postives = 51/83 (61.45%), Query Frame = 1
Query: 43 VLVVMRGVPGSGKSTLTRKIQRRMSRRGRHVDVRVASADTHFEKGPHGALYVFDFRSLHRAHQLCQETVQQAMMEEVPLVVLD 291
++V++RG+PGSGKST+ + I+R+ H+ R+ SAD F K YV+D + AH CQE +A+ E++ +VV+D
Sbjct: 113 IMVILRGLPGSGKSTIAKHIERK------HISCRICSADNFFMKDGE---YVYDRSLIKEAHAQCQENAIKAVEEQISVVVID 186
BLAST of mRNA_M-pyrifera_M_contig110265.2155.1 vs. uniprot
Match: A0A1V9YQ71_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YQ71_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 3.850e-8 Identity = 36/80 (45.00%), Postives = 48/80 (60.00%), Query Frame = 1
Query: 52 VMRGVPGSGKSTLTRKIQRRMSRRGRHVDVRVASADTHFEKGPHGALYVFDFRSLHRAHQLCQETVQQAMMEEVPLVVLD 291
V+RGVPGSGKS+L R ++ R +G + VRV SAD FE+G G Y++D L AH C V A+ V +VV+D
Sbjct: 489 VLRGVPGSGKSSLARHLRGRCDAQG--LSVRVCSADAFFEQGDGG--YIYDRSRLAEAHAFCHAAVLAAVAANVDVVVVD 564
BLAST of mRNA_M-pyrifera_M_contig110265.2155.1 vs. uniprot
Match: A0A6G0XX45_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XX45_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 5.170e-8 Identity = 39/82 (47.56%), Postives = 47/82 (57.32%), Query Frame = 1
Query: 46 LVVMRGVPGSGKSTLTRKIQRRMSRRGRHVDVRVASADTHFEKGPHGALYVFDFRSLHRAHQLCQETVQQAMMEEVPLVVLD 291
+V+MRG PGSGKSTLTR +Q GR V+V SADT FE P G Y D L AH C+ A+ VP+VV+D
Sbjct: 254 VVIMRGRPGSGKSTLTRVVQAMAHFHGREVEV--CSADTFFET-PLG--YYHDRNKLSEAHDACKAAFADAIARSVPVVVVD 330
BLAST of mRNA_M-pyrifera_M_contig110265.2155.1 vs. uniprot
Match: W4H9B6_9STRA (Uncharacterized protein n=11 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H9B6_9STRA) HSP 1 Score: 57.4 bits (137), Expect = 1.800e-7 Identity = 36/82 (43.90%), Postives = 50/82 (60.98%), Query Frame = 1
Query: 46 LVVMRGVPGSGKSTLTRKIQRRMSRRGRHVDVRVASADTHFEKGPHGALYVFDFRSLHRAHQLCQETVQQAMMEEVPLVVLD 291
+V++RG PGSGKSTLTR ++ + + G DV V SADTHF+ P G Y +D L AH C+ A+ + V +VV+D
Sbjct: 253 VVILRGRPGSGKSTLTRIVKAKAASLG--YDVAVCSADTHFDS-PWG--YHYDKAQLPAAHDACRLAFHDALQQHVAVVVVD 329
BLAST of mRNA_M-pyrifera_M_contig110265.2155.1 vs. uniprot
Match: W2QDM7_PHYPN (tRNA_lig_CPD domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2QDM7_PHYPN) HSP 1 Score: 57.4 bits (137), Expect = 1.810e-7 Identity = 41/97 (42.27%), Postives = 57/97 (58.76%), Query Frame = 1
Query: 1 VERAISAMETGGKGVLVVMRGVPGSGKSTLTRKIQRRMSRRGRHVDVRVASADTHFEKGPHGALYVFDFRSLHRAHQLCQETVQQAMMEEVPLVVLD 291
V+ +S+ +TG K V+V++RG+PGSGKSTL R+I+ RG V + SAD FE P G YVFD R L AH C+ +A+ +P + D
Sbjct: 253 VDDMLSSKDTG-KPVVVILRGIPGSGKSTLGREIEAICHHRG--VALTACSADFFFET-PRG--YVFDVRKLGAAHSKCKGDFTRAVHGGIPRNISD 343
BLAST of mRNA_M-pyrifera_M_contig110265.2155.1 vs. uniprot
Match: A0A1V9ZDD5_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZDD5_9STRA) HSP 1 Score: 56.2 bits (134), Expect = 4.460e-7 Identity = 32/82 (39.02%), Postives = 52/82 (63.41%), Query Frame = 1
Query: 46 LVVMRGVPGSGKSTLTRKIQRRMSRRGRHVDVRVASADTHFEKGPHGALYVFDFRSLHRAHQLCQETVQQAMMEEVPLVVLD 291
+V++RG+PGSGKST++R +Q+ +G V + SADT+FE P G Y + L AH+LC+ T +A+ + ++V+D
Sbjct: 250 VVILRGLPGSGKSTISRLVQKMAIEQG--VSTVLCSADTYFES-PSG--YYHERSKLTEAHELCKSTFSRAISNNIDVIVVD 326
BLAST of mRNA_M-pyrifera_M_contig110265.2155.1 vs. uniprot
Match: A0A6A5AZT2_9STRA (AKAP7_NLS domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AZT2_9STRA) HSP 1 Score: 55.5 bits (132), Expect = 8.180e-7 Identity = 37/82 (45.12%), Postives = 47/82 (57.32%), Query Frame = 1
Query: 46 LVVMRGVPGSGKSTLTRKIQRRMSRRGRHVDVRVASADTHFEKGPHGALYVFDFRSLHRAHQLCQETVQQAMMEEVPLVVLD 291
+V++RGVPGSGKST +R I + G VRV SAD+ F++ Y FD L AH CQ VQ AM V +VV+D
Sbjct: 186 MVILRGVPGSGKSTSSRSIAALCAANG--WSVRVCSADSCFDQS---GGYKFDKSKLPLAHAQCQHEVQDAMKSTVDVVVVD 262
BLAST of mRNA_M-pyrifera_M_contig110265.2155.1 vs. uniprot
Match: A0A329SYL3_9STRA (tRNA_lig_CPD domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SYL3_9STRA) HSP 1 Score: 55.5 bits (132), Expect = 8.620e-7 Identity = 37/81 (45.68%), Postives = 48/81 (59.26%), Query Frame = 1
Query: 34 GKGVLVVMRGVPGSGKSTLTRKIQRRMSRRGRHVDVRVASADTHFEKGPHGALYVFDFRSLHRAHQLCQETVQQAMMEEVP 276
GK V+V++RG+PGSGKSTL R+I+ RG V + SAD FE P G YVFD R L AH C+ +A+ +P
Sbjct: 264 GKPVVVILRGIPGSGKSTLGREIEAICRYRG--VALTACSADLFFET-PRG--YVFDVRKLGAAHSKCKGDFTKAVQGGIP 339
BLAST of mRNA_M-pyrifera_M_contig110265.2155.1 vs. uniprot
Match: A0A418E399_9STRA (RWD domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418E399_9STRA) HSP 1 Score: 55.1 bits (131), Expect = 1.170e-6 Identity = 37/82 (45.12%), Postives = 47/82 (57.32%), Query Frame = 1
Query: 46 LVVMRGVPGSGKSTLTRKIQRRMSRRGRHVDVRVASADTHFEKGPHGALYVFDFRSLHRAHQLCQETVQQAMMEEVPLVVLD 291
+V++RGVPGSGKST +R I + G VRV SAD+ F++ Y FD L AH CQ VQ AM V +VV+D
Sbjct: 506 MVILRGVPGSGKSTTSRSIAVLCAANG--WSVRVCSADSCFDQS---GGYKFDKSKLPLAHAQCQHEVQDAMKSTVDVVVVD 582 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig110265.2155.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig110265.2155.1 >prot_M-pyrifera_M_contig110265.2155.1 ID=prot_M-pyrifera_M_contig110265.2155.1|Name=mRNA_M-pyrifera_M_contig110265.2155.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=90bp METGGKGVLVVMRGVPGSGKSTLTRKIQRRMSRRGRHVDVRVASADTHFEback to top mRNA from alignment at M-pyrifera_M_contig110265:1..291- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig110265.2155.1 ID=mRNA_M-pyrifera_M_contig110265.2155.1|Name=mRNA_M-pyrifera_M_contig110265.2155.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=291bp|location=Sequence derived from alignment at M-pyrifera_M_contig110265:1..291- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig110265:1..291- >mRNA_M-pyrifera_M_contig110265.2155.1 ID=mRNA_M-pyrifera_M_contig110265.2155.1|Name=mRNA_M-pyrifera_M_contig110265.2155.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=540bp|location=Sequence derived from alignment at M-pyrifera_M_contig110265:1..291- (Macrocystis pyrifera P11B4 male)back to top |